BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003471
         (1751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding prot...   719   0.0  
ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding prot...   702   0.0  
emb|CBI18226.3| unnamed protein product [Vitis vinifera]              701   0.0  
ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding prot...   686   0.0  
ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding prot...   684   0.0  

>ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
            isoform 1 [Vitis vinifera]
          Length = 448

 Score =  719 bits (1856), Expect = 0.0
 Identities = 362/450 (80%), Positives = 392/450 (87%), Gaps = 1/450 (0%)
 Frame = +1

Query: 190  MTEPSKVIHVRNVGHEISENDLLQLVQNFGTVTKLVMLRAKNQALLQMHDLEASVAAMQY 369
            MTEPSKVIHVRNVG EISENDLLQLV  FG VTKLVMLRAKNQALLQM D+ ++V+A+QY
Sbjct: 1    MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 370  YTNVQPQIRGRNVYVQFSSHQELTTMEQNGPGRNGADQDTQPNRILLVTIHHLLYPITVE 549
            Y NVQP +RGRNVYVQFSSHQELTTM+QN  GR G DQD QPNRILLVTIHHLLYPITVE
Sbjct: 61   YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKG-DQDAQPNRILLVTIHHLLYPITVE 119

Query: 550  VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQSRQSAVTARTALQGRNIYDGCCQLDIQFS 729
            VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQSRQSAV+A  ALQGRNIYDGCCQLDIQFS
Sbjct: 120  VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFS 179

Query: 730  NLTELQVNYNNDRSRDFTNPSLPSEQKGRSSQPGYGDTASLYTLQPPGAR-VPFPQMXXX 906
            NLTELQVNYNN+RSRDFTNPSLPSEQKGRSSQ GYGD   +Y LQPPGAR V FPQM   
Sbjct: 180  NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGARPVAFPQMGNA 239

Query: 907  XXXXXXXXXXXLPPGISGTNERCTVLVSNLNEDKVDEDKLFNLFSIYGNIVRIKLLRNKP 1086
                       LPPGISGTN+RCTVLVSNLN D++DEDKLFNLFS+YGNIVRIKLLR+KP
Sbjct: 240  TAIAAAFGGG-LPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKLLRSKP 298

Query: 1087 DHALVQMADGFQAELAVHFLKGSLLFGKRLEVNFSKHSTITPGAETHEYVNSNLNRFNRN 1266
            DHALVQM DGFQAELAVHFLKG++LFGKRLEVNFSK+  ITP  +TH+Y NSNLNRFNRN
Sbjct: 299  DHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPAPDTHDYSNSNLNRFNRN 358

Query: 1267 ASKNYRYCCSPTKMIHLSSLPEDIAEDEIIAHLEEHGTIVNTKLFEANGKKQALVLFXXX 1446
            A+KNYRYCCSPTKMIH+S+LP+DI E+EI+ HLE+HG+IVNTKLFEANGKKQALVLF   
Sbjct: 359  AAKNYRYCCSPTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVLFETE 418

Query: 1447 XXXXXXLVCKHATTIDRSVIRISFSQLQTI 1536
                  LVCKHA+ ID S IRISFSQLQ I
Sbjct: 419  EQATEALVCKHASLIDGSTIRISFSQLQAI 448


>ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
            [Vitis vinifera]
          Length = 445

 Score =  702 bits (1813), Expect = 0.0
 Identities = 353/449 (78%), Positives = 383/449 (85%)
 Frame = +1

Query: 190  MTEPSKVIHVRNVGHEISENDLLQLVQNFGTVTKLVMLRAKNQALLQMHDLEASVAAMQY 369
            MTEPSKVIHVRNVGHEISENDLLQL Q FG +TKLVMLRAKNQALLQM D+ ++  AMQ+
Sbjct: 1    MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 370  YTNVQPQIRGRNVYVQFSSHQELTTMEQNGPGRNGADQDTQPNRILLVTIHHLLYPITVE 549
            YTNVQP IRGRNVYVQFSSHQELTT++QN  GR     +  PNRILLVTIHHLLYPITVE
Sbjct: 61   YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGRG---DEVSPNRILLVTIHHLLYPITVE 117

Query: 550  VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQSRQSAVTARTALQGRNIYDGCCQLDIQFS 729
            VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQSRQSAV AR +LQGRNIYDGCCQLDIQFS
Sbjct: 118  VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 177

Query: 730  NLTELQVNYNNDRSRDFTNPSLPSEQKGRSSQPGYGDTASLYTLQPPGARVPFPQMXXXX 909
            NL ELQVNYNN+RSRDFTNPSLPSEQKGRSSQ GYGD   +Y LQP    V FPQM    
Sbjct: 178  NLDELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYALQPGARTVGFPQMPNAS 237

Query: 910  XXXXXXXXXXLPPGISGTNERCTVLVSNLNEDKVDEDKLFNLFSIYGNIVRIKLLRNKPD 1089
                      LPPGISGTN+RCTVLVSNLN D++DEDKLFNLFSIYGNIVRIKLLRNKPD
Sbjct: 238  AIAAAFGGG-LPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPD 296

Query: 1090 HALVQMADGFQAELAVHFLKGSLLFGKRLEVNFSKHSTITPGAETHEYVNSNLNRFNRNA 1269
            HALVQM DGFQAELAVHFLKG++LFGKRLEVNFSK+S IT GA+THEY+NS+LNRFNRNA
Sbjct: 297  HALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNRFNRNA 356

Query: 1270 SKNYRYCCSPTKMIHLSSLPEDIAEDEIIAHLEEHGTIVNTKLFEANGKKQALVLFXXXX 1449
            +KNYRYCCSPTKMIH+S+L +DI E+EI++HLEEHGTIVNTKLFE NGKKQALV+F    
Sbjct: 357  AKNYRYCCSPTKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVMFENEE 416

Query: 1450 XXXXXLVCKHATTIDRSVIRISFSQLQTI 1536
                 LVCKHAT +    IRISFSQLQ I
Sbjct: 417  QATEALVCKHATPLGGLAIRISFSQLQGI 445


>emb|CBI18226.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  701 bits (1810), Expect = 0.0
 Identities = 353/449 (78%), Positives = 383/449 (85%)
 Frame = +1

Query: 190  MTEPSKVIHVRNVGHEISENDLLQLVQNFGTVTKLVMLRAKNQALLQMHDLEASVAAMQY 369
            MTEPSKVIHVRNVGHEISENDLLQL Q FG +TKLVMLRAKNQALLQM D+ ++  AMQ+
Sbjct: 1    MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 370  YTNVQPQIRGRNVYVQFSSHQELTTMEQNGPGRNGADQDTQPNRILLVTIHHLLYPITVE 549
            YTNVQP IRGRNVYVQFSSHQELTT++QN  GR       +PNRILLVTIHHLLYPITVE
Sbjct: 61   YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGRGD-----EPNRILLVTIHHLLYPITVE 115

Query: 550  VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQSRQSAVTARTALQGRNIYDGCCQLDIQFS 729
            VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQSRQSAV AR +LQGRNIYDGCCQLDIQFS
Sbjct: 116  VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 175

Query: 730  NLTELQVNYNNDRSRDFTNPSLPSEQKGRSSQPGYGDTASLYTLQPPGARVPFPQMXXXX 909
            NL ELQVNYNN+RSRDFTNPSLPSEQKGRSSQ GYGD   +Y LQP    V FPQM    
Sbjct: 176  NLDELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYALQPGARTVGFPQMPNAS 235

Query: 910  XXXXXXXXXXLPPGISGTNERCTVLVSNLNEDKVDEDKLFNLFSIYGNIVRIKLLRNKPD 1089
                      LPPGISGTN+RCTVLVSNLN D++DEDKLFNLFSIYGNIVRIKLLRNKPD
Sbjct: 236  AIAAAFGGG-LPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPD 294

Query: 1090 HALVQMADGFQAELAVHFLKGSLLFGKRLEVNFSKHSTITPGAETHEYVNSNLNRFNRNA 1269
            HALVQM DGFQAELAVHFLKG++LFGKRLEVNFSK+S IT GA+THEY+NS+LNRFNRNA
Sbjct: 295  HALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNRFNRNA 354

Query: 1270 SKNYRYCCSPTKMIHLSSLPEDIAEDEIIAHLEEHGTIVNTKLFEANGKKQALVLFXXXX 1449
            +KNYRYCCSPTKMIH+S+L +DI E+EI++HLEEHGTIVNTKLFE NGKKQALV+F    
Sbjct: 355  AKNYRYCCSPTKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVMFENEE 414

Query: 1450 XXXXXLVCKHATTIDRSVIRISFSQLQTI 1536
                 LVCKHAT +    IRISFSQLQ I
Sbjct: 415  QATEALVCKHATPLGGLAIRISFSQLQGI 443


>ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 2
            [Vitis vinifera]
          Length = 432

 Score =  686 bits (1769), Expect = 0.0
 Identities = 350/449 (77%), Positives = 379/449 (84%)
 Frame = +1

Query: 190  MTEPSKVIHVRNVGHEISENDLLQLVQNFGTVTKLVMLRAKNQALLQMHDLEASVAAMQY 369
            MTEPSKVIHVRNVGHEISENDLLQL Q FG +TKLVMLRAKNQALLQM D+ ++  AMQ+
Sbjct: 1    MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 370  YTNVQPQIRGRNVYVQFSSHQELTTMEQNGPGRNGADQDTQPNRILLVTIHHLLYPITVE 549
            YTNVQP IRGRNVYVQFSSHQELTT++QN  GR       +PNRILLVTIHHLLYPITVE
Sbjct: 61   YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGRGD-----EPNRILLVTIHHLLYPITVE 115

Query: 550  VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQSRQSAVTARTALQGRNIYDGCCQLDIQFS 729
            VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQSRQSAV AR +LQGRNIYDGCCQLDIQFS
Sbjct: 116  VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 175

Query: 730  NLTELQVNYNNDRSRDFTNPSLPSEQKGRSSQPGYGDTASLYTLQPPGARVPFPQMXXXX 909
            NL ELQVNYNN+RSRDFTNPSLPSEQKGRSSQ GYGD           A V FPQM    
Sbjct: 176  NLDELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGD-----------AGVGFPQMPNAS 224

Query: 910  XXXXXXXXXXLPPGISGTNERCTVLVSNLNEDKVDEDKLFNLFSIYGNIVRIKLLRNKPD 1089
                      LPPGISGTN+RCTVLVSNLN D++DEDKLFNLFSIYGNIVRIKLLRNKPD
Sbjct: 225  AIAAAFGGG-LPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPD 283

Query: 1090 HALVQMADGFQAELAVHFLKGSLLFGKRLEVNFSKHSTITPGAETHEYVNSNLNRFNRNA 1269
            HALVQM DGFQAELAVHFLKG++LFGKRLEVNFSK+S IT GA+THEY+NS+LNRFNRNA
Sbjct: 284  HALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNRFNRNA 343

Query: 1270 SKNYRYCCSPTKMIHLSSLPEDIAEDEIIAHLEEHGTIVNTKLFEANGKKQALVLFXXXX 1449
            +KNYRYCCSPTKMIH+S+L +DI E+EI++HLEEHGTIVNTKLFE NGKKQALV+F    
Sbjct: 344  AKNYRYCCSPTKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVMFENEE 403

Query: 1450 XXXXXLVCKHATTIDRSVIRISFSQLQTI 1536
                 LVCKHAT +    IRISFSQLQ I
Sbjct: 404  QATEALVCKHATPLGGLAIRISFSQLQGI 432


>ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
            [Glycine max]
          Length = 439

 Score =  684 bits (1766), Expect = 0.0
 Identities = 339/449 (75%), Positives = 381/449 (84%)
 Frame = +1

Query: 190  MTEPSKVIHVRNVGHEISENDLLQLVQNFGTVTKLVMLRAKNQALLQMHDLEASVAAMQY 369
            M EPSKVIHVRNVGHEISENDLLQL Q FG +TKLVMLRAKNQALLQM D+ ++V A+Q+
Sbjct: 1    MAEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDIPSAVNALQF 60

Query: 370  YTNVQPQIRGRNVYVQFSSHQELTTMEQNGPGRNGADQDTQPNRILLVTIHHLLYPITVE 549
            Y NVQP IRGRNVYVQFSSHQELTTM+QN        ++ +PNRILLVT+HH+LYPIT +
Sbjct: 61   YANVQPSIRGRNVYVQFSSHQELTTMDQNQA------REDEPNRILLVTVHHMLYPITAD 114

Query: 550  VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQSRQSAVTARTALQGRNIYDGCCQLDIQFS 729
            VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQSRQSAVTAR+ LQGRNIYDGCCQLDIQFS
Sbjct: 115  VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVTARSTLQGRNIYDGCCQLDIQFS 174

Query: 730  NLTELQVNYNNDRSRDFTNPSLPSEQKGRSSQPGYGDTASLYTLQPPGARVPFPQMXXXX 909
            NL ELQVNYNNDRSRDFTNP+LP+EQKGRSSQPGYGD A +Y+    GAR          
Sbjct: 175  NLDELQVNYNNDRSRDFTNPNLPTEQKGRSSQPGYGDAAGMYS----GARAGGFSQMANA 230

Query: 910  XXXXXXXXXXLPPGISGTNERCTVLVSNLNEDKVDEDKLFNLFSIYGNIVRIKLLRNKPD 1089
                      LPPGI+GTNERCTVLV+NLN D++DEDKLFNLFSIYGNIVRIKLLRNKPD
Sbjct: 231  AAIAAAFGGGLPPGITGTNERCTVLVANLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPD 290

Query: 1090 HALVQMADGFQAELAVHFLKGSLLFGKRLEVNFSKHSTITPGAETHEYVNSNLNRFNRNA 1269
            HAL+QM DGFQAELAVHFLKG++LFGKRLEVN+SKH+ IT GA+THEYVNSNLNRFNRNA
Sbjct: 291  HALIQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHANITQGADTHEYVNSNLNRFNRNA 350

Query: 1270 SKNYRYCCSPTKMIHLSSLPEDIAEDEIIAHLEEHGTIVNTKLFEANGKKQALVLFXXXX 1449
            +KNYRYCCSPTKM+HLS+LP+DI E+E+++ LEEHGTIVN+K+FE NGKKQALV F    
Sbjct: 351  AKNYRYCCSPTKMVHLSTLPQDITEEEVVSLLEEHGTIVNSKVFEMNGKKQALVQFETEE 410

Query: 1450 XXXXXLVCKHATTIDRSVIRISFSQLQTI 1536
                 LVCKHA+ +  SV+RISFSQLQ I
Sbjct: 411  QATEALVCKHASPLSGSVVRISFSQLQNI 439