BLASTX nr result

ID: Cimicifuga21_contig00003461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003461
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAQ58595.1| unknown protein [Vitis vinifera]                      209   1e-51
ref|XP_002305896.1| predicted protein [Populus trichocarpa] gi|2...   202   1e-49
emb|CAQ58602.1| unknown gene [Vitis vinifera]                         201   3e-49
ref|XP_003617467.1| hypothetical protein MTR_5g091900 [Medicago ...   199   8e-49
ref|XP_002528501.1| conserved hypothetical protein [Ricinus comm...   197   5e-48

>emb|CAQ58595.1| unknown protein [Vitis vinifera]
          Length = 220

 Score =  209 bits (531), Expect = 1e-51
 Identities = 115/231 (49%), Positives = 146/231 (63%), Gaps = 1/231 (0%)
 Frame = +1

Query: 151 MAEEQDKTEETVRFLDLDDTSTNTSVNRNRQEEETLYTVLHRIFTAILSPDPNTSDALFK 330
           MA+ +D  +    FL++D             ++ TLY VLHR+  AI  PDP +S +L +
Sbjct: 1   MADFEDAQKPNGGFLEVDGG-----------DDLTLYHVLHRLMAAIFFPDPTSSASLLR 49

Query: 331 RIKKSVYENVPLLPDASRNSARKLLIWTRQGSPLRALLVISVGTIVLLSLTGLLVFMLFF 510
           R+K SV +NVPLL  AS+N+AR ++ WTR+GS LRALL ISVGTI LL+LTGLLVFMLFF
Sbjct: 50  RVKISVADNVPLLRQASKNTARNVMHWTRRGSALRALLAISVGTITLLALTGLLVFMLFF 109

Query: 511 VAATINAIIISLLMSXXXXXXXXXXXXXCLTAIYVGALXXXXXXXXXXXXXXXXXXXXXX 690
           +AAT NAI+ISLLMS             C+TAIY+GAL                      
Sbjct: 110 LAATFNAIVISLLMSLAAAGGFLALFFACITAIYIGALSVAVVVISTATISAIIAVLITT 169

Query: 691 GWIGFFWTVWIATKKSMGLAKHSITMTGSALSAYSTARQARYIHS-EKVSN 840
           GWIGFFWTVW+ TKKS G AKHS+ MTGSA++AYS+ R  R  H  +K+S+
Sbjct: 170 GWIGFFWTVWLVTKKSAGFAKHSLGMTGSAIAAYSSVRHVRRHHDFDKISD 220


>ref|XP_002305896.1| predicted protein [Populus trichocarpa] gi|222848860|gb|EEE86407.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  202 bits (514), Expect = 1e-49
 Identities = 108/193 (55%), Positives = 133/193 (68%), Gaps = 3/193 (1%)
 Frame = +1

Query: 244 EEETLYTVLHRIFTAILSPDPNTS---DALFKRIKKSVYENVPLLPDASRNSARKLLIWT 414
           +E  LYTV+HR+   IL PDP +S    +L +RIK  + EN+PLL + SRNS +KLL WT
Sbjct: 24  QEIDLYTVIHRVIVMILYPDPGSSASSTSLLQRIKIVLSENLPLLGEGSRNSGKKLLQWT 83

Query: 415 RQGSPLRALLVISVGTIVLLSLTGLLVFMLFFVAATINAIIISLLMSXXXXXXXXXXXXX 594
           ++GSPLRALLVISVGTI LLSLTG+LVFMLFF+AAT NAI+ISLLMS             
Sbjct: 84  QRGSPLRALLVISVGTIALLSLTGVLVFMLFFLAATFNAIVISLLMSLAAAGGFLALFFA 143

Query: 595 CLTAIYVGALXXXXXXXXXXXXXXXXXXXXXXGWIGFFWTVWIATKKSMGLAKHSITMTG 774
            L AIY+GAL                      GWIGFFWTVW+ TKKS+G+AKHS+T+TG
Sbjct: 144 FLAAIYIGALSVAVFVISTATISATVAVLIVTGWIGFFWTVWLVTKKSIGVAKHSLTVTG 203

Query: 775 SALSAYSTARQAR 813
           SA+SAYS++R A+
Sbjct: 204 SAISAYSSSRHAK 216


>emb|CAQ58602.1| unknown gene [Vitis vinifera]
          Length = 217

 Score =  201 bits (511), Expect = 3e-49
 Identities = 114/231 (49%), Positives = 144/231 (62%), Gaps = 1/231 (0%)
 Frame = +1

Query: 151 MAEEQDKTEETVRFLDLDDTSTNTSVNRNRQEEETLYTVLHRIFTAILSPDPNTSDALFK 330
           MA+ +D  +    FL++D             ++ TLY VLHR+  AI  PDP +S  L +
Sbjct: 1   MADFEDAQKPNGGFLEVDGG-----------DDLTLYHVLHRLMAAIFFPDPTSSAPLLR 49

Query: 331 RIKKSVYENVPLLPDASRNSARKLLIWTRQGSPLRALLVISVGTIVLLSLTGLLVFMLFF 510
           R+K SV +NVPLL  AS+N+AR ++ WTR+G   RALLVISVGTI LL+LTGLLVFMLFF
Sbjct: 50  RVKISVADNVPLLRQASKNTARNVVHWTRRG---RALLVISVGTITLLALTGLLVFMLFF 106

Query: 511 VAATINAIIISLLMSXXXXXXXXXXXXXCLTAIYVGALXXXXXXXXXXXXXXXXXXXXXX 690
           +AAT NAI+ISLLMS             C+TAIY+GAL                      
Sbjct: 107 LAATFNAIVISLLMSLAAAGGFLALFFACITAIYIGALSVAVVVISTATISAIIAALITT 166

Query: 691 GWIGFFWTVWIATKKSMGLAKHSITMTGSALSAYSTARQARYIHS-EKVSN 840
           GWIGFFWTVW+ TKKS G AKHS+ MTGSA++AYS+ R  R  H  +K+S+
Sbjct: 167 GWIGFFWTVWLVTKKSAGFAKHSLGMTGSAIAAYSSVRHVRRHHDFDKISD 217


>ref|XP_003617467.1| hypothetical protein MTR_5g091900 [Medicago truncatula]
           gi|355518802|gb|AET00426.1| hypothetical protein
           MTR_5g091900 [Medicago truncatula]
           gi|388503112|gb|AFK39622.1| unknown [Medicago
           truncatula]
          Length = 232

 Score =  199 bits (507), Expect = 8e-49
 Identities = 101/207 (48%), Positives = 140/207 (67%), Gaps = 1/207 (0%)
 Frame = +1

Query: 202 DDTSTNTSVNRNRQE-EETLYTVLHRIFTAILSPDPNTSDALFKRIKKSVYENVPLLPDA 378
           ++  TN   +RN +  ++TL  VL+R+ + IL PDP    +L +RIK SV +N PL+P+A
Sbjct: 20  EEEETNNLKHRNTKPVKQTLPEVLNRLASTILFPDPADGTSLLRRIKNSVADNAPLIPEA 79

Query: 379 SRNSARKLLIWTRQGSPLRALLVISVGTIVLLSLTGLLVFMLFFVAATINAIIISLLMSX 558
           SRNSA  +L+WTR+GSPLRALLVISVGT+  +SL+GLLVFMLFF+ AT+NAI+ISLL+S 
Sbjct: 80  SRNSANDVLVWTRRGSPLRALLVISVGTVAFVSLSGLLVFMLFFLTATVNAIVISLLISL 139

Query: 559 XXXXXXXXXXXXCLTAIYVGALXXXXXXXXXXXXXXXXXXXXXXGWIGFFWTVWIATKKS 738
                       C T+IY+GAL                      GWIGFF+TVW+ T+KS
Sbjct: 140 AAAGGFLAIFFACATSIYIGALSIAIFVISVTTFWTIVAILITSGWIGFFYTVWLITRKS 199

Query: 739 MGLAKHSITMTGSALSAYSTARQARYI 819
            G AKHS+++TG+A++ YST+R +R++
Sbjct: 200 FGFAKHSLSVTGAAITTYSTSRASRHL 226


>ref|XP_002528501.1| conserved hypothetical protein [Ricinus communis]
           gi|223532061|gb|EEF33870.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 228

 Score =  197 bits (500), Expect = 5e-48
 Identities = 104/203 (51%), Positives = 136/203 (66%), Gaps = 3/203 (1%)
 Frame = +1

Query: 235 NRQEEETLYTVLHRIFTAILSPDPNTSDA---LFKRIKKSVYENVPLLPDASRNSARKLL 405
           +R+EE TLY+VLHR+ + I  PD  +  A   + +RIK  V EN PLL DASR++ RK++
Sbjct: 24  SRREELTLYSVLHRMASMIFVPDSRSDAASLPVMQRIKACVSENGPLLKDASRDTGRKIV 83

Query: 406 IWTRQGSPLRALLVISVGTIVLLSLTGLLVFMLFFVAATINAIIISLLMSXXXXXXXXXX 585
           IWTR+GSPLRALLVIS+G+I  ++LTGLLVFMLFF+AAT+NAI++SLL+S          
Sbjct: 84  IWTRRGSPLRALLVISLGSITFVTLTGLLVFMLFFLAATVNAIVVSLLISLAAAGGFLAL 143

Query: 586 XXXCLTAIYVGALXXXXXXXXXXXXXXXXXXXXXXGWIGFFWTVWIATKKSMGLAKHSIT 765
              C+TA+Y+GAL                      GWIGF  TVW+ TKKS+ +AKHS+ 
Sbjct: 144 FFACVTAVYIGALSIAVFVISTATISAIIAVLIATGWIGFLCTVWLVTKKSLAVAKHSLN 203

Query: 766 MTGSALSAYSTARQARYIHSEKV 834
           MTGSA+SAYS+AR   Y   +KV
Sbjct: 204 MTGSAISAYSSARHRHYHEVDKV 226


Top