BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003452
         (1584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containi...   507   e-141
emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]   506   e-141
ref|XP_004137115.1| PREDICTED: pentatricopeptide repeat-containi...   467   e-129
ref|XP_002279824.1| PREDICTED: pentatricopeptide repeat-containi...   465   e-128
ref|XP_004166669.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   465   e-128

>ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
            [Vitis vinifera]
          Length = 593

 Score =  507 bits (1306), Expect = e-141
 Identities = 248/381 (65%), Positives = 296/381 (77%), Gaps = 3/381 (0%)
 Frame = -2

Query: 1457 NHPQQENVDLIGLCRNGKIKEAVEFVSKGSITVNDAATFFELLNACGNLKLQEEARKVND 1278
            +H      DL+ LC+ GK+KEAVE + KG     DA  F+ L N+CG+ KL EEA+KV+D
Sbjct: 215  SHAPPSVADLMNLCQEGKVKEAVELMEKGVRA--DAQCFYALFNSCGSPKLLEEAKKVHD 272

Query: 1277 FLMRSPFRGDLQLVNKSIEMLGKCASMSNARQLFDRMAERNLESWHLIIYGYAMNGQGDE 1098
            F ++S FR DLQL NK +EM G C SM++AR++FD MA R+++SWHL+I GYA N  GD+
Sbjct: 273  FFLQSTFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMANRDMDSWHLMINGYANNAMGDD 332

Query: 1097 GLELFEQMRKLGVQPNEQTFLAVLXXXXXXXXXXXSFTHLDLMKNEYGITPSVDHYLGVI 918
            GL+L+EQMRKLG++PNEQTFLAVL            F H + MK EYGITP+ +HY+G+I
Sbjct: 333  GLQLYEQMRKLGLEPNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVGII 392

Query: 917  DVLGSAGHVTEAYDYIEKLPLEPDARIWEALKKIARIHGDVDLEDYAEELMVALDPSXXX 738
            DVLG +GHV EA ++IE++P+EP A +WEAL   A+IHGD+DLED+AEELMVALDP    
Sbjct: 393  DVLGKSGHVIEAKEFIEQMPVEPSAVVWEALMNYAKIHGDIDLEDHAEELMVALDPLKAV 452

Query: 737  XXXXXXXXXXKRTAVNMLDGKNRLSEFRMTTYYKNDPK---ASAPKEQGYVPDTRYVLHD 567
                      KRTA+NMLDGKNRLSEFR  T YK+D K    +  KE GYVPDTRYVLHD
Sbjct: 453  ANKTPTPPPKKRTAINMLDGKNRLSEFRNPTLYKDDEKLKSLNGMKEAGYVPDTRYVLHD 512

Query: 566  IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKVMARIVGRELI 387
            IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR+CGDCHNAIK+M++IVGRELI
Sbjct: 513  IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSKIVGRELI 572

Query: 386  VRDNKRFHHFKDGKCSCGDYW 324
            VRDNKRFHHFKDGKCSCGDYW
Sbjct: 573  VRDNKRFHHFKDGKCSCGDYW 593


>emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
          Length = 627

 Score =  506 bits (1302), Expect = e-141
 Identities = 247/381 (64%), Positives = 295/381 (77%), Gaps = 3/381 (0%)
 Frame = -2

Query: 1457 NHPQQENVDLIGLCRNGKIKEAVEFVSKGSITVNDAATFFELLNACGNLKLQEEARKVND 1278
            +H      DL+ LC+ GK+KEAVE + KG     DA  F+ L N+CG+ KL EEA+KV+D
Sbjct: 249  SHAPPSVADLMNLCQEGKVKEAVELMEKGVRA--DAQCFYALFNSCGSPKLLEEAKKVHD 306

Query: 1277 FLMRSPFRGDLQLVNKSIEMLGKCASMSNARQLFDRMAERNLESWHLIIYGYAMNGQGDE 1098
            F ++S FR DLQL NK +EM G C SM++AR++FD M  R+++SWHL+I GYA N  GD+
Sbjct: 307  FFLQSTFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMTNRDMDSWHLMINGYANNAMGDD 366

Query: 1097 GLELFEQMRKLGVQPNEQTFLAVLXXXXXXXXXXXSFTHLDLMKNEYGITPSVDHYLGVI 918
            GL+L+EQMRKLG++PNEQTFLAVL            F H + MK EYGITP+ +HY+G+I
Sbjct: 367  GLQLYEQMRKLGLEPNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVGII 426

Query: 917  DVLGSAGHVTEAYDYIEKLPLEPDARIWEALKKIARIHGDVDLEDYAEELMVALDPSXXX 738
            DVLG +GHV EA ++IE++P+EP A +WEAL   A+IHGD+DLED+AEELMVALDP    
Sbjct: 427  DVLGKSGHVIEAKEFIEQMPVEPSAVVWEALMNYAKIHGDIDLEDHAEELMVALDPLKAV 486

Query: 737  XXXXXXXXXXKRTAVNMLDGKNRLSEFRMTTYYKNDPK---ASAPKEQGYVPDTRYVLHD 567
                      KRTA+NMLDGKNRLSEFR  T YK+D K    +  KE GYVPDTRYVLHD
Sbjct: 487  ANKTPTPPPKKRTAINMLDGKNRLSEFRNPTLYKDDEKLKSLNGMKEAGYVPDTRYVLHD 546

Query: 566  IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKVMARIVGRELI 387
            IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR+CGDCHNAIK+M++IVGRELI
Sbjct: 547  IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSKIVGRELI 606

Query: 386  VRDNKRFHHFKDGKCSCGDYW 324
            VRDNKRFHHFKDGKCSCGDYW
Sbjct: 607  VRDNKRFHHFKDGKCSCGDYW 627


>ref|XP_004137115.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like
            [Cucumis sativus]
          Length = 688

 Score =  467 bits (1202), Expect = e-129
 Identities = 230/373 (61%), Positives = 277/373 (74%), Gaps = 3/373 (0%)
 Frame = -2

Query: 1433 DLIGLCRNGKIKEAVEFVSKGSITVNDAATFFELLNACGNLKLQEEARKVNDFLMRSPFR 1254
            +L   C  GK+KEAVE + +G     D   F  L   CG  K  + A+ V+D+ ++S  R
Sbjct: 318  ELRRFCGEGKLKEAVELLKQG--VKADVDCFHLLFELCGKSKSFDNAKVVHDYFLQSSCR 375

Query: 1253 GDLQLVNKSIEMLGKCASMSNARQLFDRMAERNLESWHLIIYGYAMNGQGDEGLELFEQM 1074
             DLQL N+ +EM G+C SMS+AR++FD M +R+++SWHL++ GYA NG GDEGLELFE M
Sbjct: 376  SDLQLNNEVLEMYGRCGSMSDARRVFDHMPDRSIDSWHLMMKGYADNGLGDEGLELFENM 435

Query: 1073 RKLGVQPNEQTFLAVLXXXXXXXXXXXSFTHLDLMKNEYGITPSVDHYLGVIDVLGSAGH 894
            + LG+QPN QTFL V+            F + + MKN+Y ITP  +HYLG++ +LG  GH
Sbjct: 436  KNLGLQPNSQTFLYVMSACASANAVEEGFLYFESMKNDYHITPDTNHYLGLLGILGEPGH 495

Query: 893  VTEAYDYIEKLPLEPDARIWEALKKIARIHGDVDLEDYAEELMVALDPSXXXXXXXXXXX 714
            + EA++Y+EKLP+EP   +WE LK  ARIHGDVDLEDYAEEL+V LDP+           
Sbjct: 496  IHEAFEYVEKLPMEPTVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAVSNKISTPP 555

Query: 713  XXKRTAVNMLDGKNRLSEFRMTTYYKNDPK---ASAPKEQGYVPDTRYVLHDIDQEAKEQ 543
              KR+A++MLDGKNR+ EFR  T YK+D K     A KEQGYVPDTRYVLHDIDQEAKEQ
Sbjct: 556  PKKRSAISMLDGKNRIVEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQ 615

Query: 542  ALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKVMARIVGRELIVRDNKRFH 363
            ALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIK+M+RIVGRELIVRDNKRFH
Sbjct: 616  ALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFH 675

Query: 362  HFKDGKCSCGDYW 324
            HFKDGKCSCGDYW
Sbjct: 676  HFKDGKCSCGDYW 688


>ref|XP_002279824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like
            [Vitis vinifera]
          Length = 476

 Score =  465 bits (1197), Expect = e-128
 Identities = 235/391 (60%), Positives = 286/391 (73%), Gaps = 13/391 (3%)
 Frame = -2

Query: 1457 NHPQQEN-------VDLIGLCRNGKIKEAVEFVSKGSITVNDAATFFELLNACGNLKLQE 1299
            N+PQ EN       VDL+GLC  GKI+EAVE++ +G     +   F  +L++CG  K  E
Sbjct: 91   NYPQTENFTVVHSGVDLMGLCEEGKIREAVEYMGQGVCA--EYGVFCAMLSSCGKTKSLE 148

Query: 1298 EARKVNDFLMRSPFRGDLQLVNKSIEMLGKCASMSNARQLFDRMAERNLESWHLIIYGYA 1119
              R+V+D L RS F GD++L NK IEM G+C SM +AR++FDRM ERN+ SWHL+I GYA
Sbjct: 149  VGRRVHDLLARSKFGGDVELNNKLIEMYGRCGSMRDARRVFDRMRERNMSSWHLMINGYA 208

Query: 1118 MNGQGDEGLELFEQMRKLGVQPNEQTFLAVLXXXXXXXXXXXSFTHLDLMKNEYGITPSV 939
             NGQG +GL LFE+MRK+G++P  +TF+AVL            F   +LMK E GI P +
Sbjct: 209  ANGQGRDGLLLFERMRKVGLRPVGETFVAVLSACGSVEEGLMYF---ELMKKECGIIPGI 265

Query: 938  DHYLGVIDVLGSAGHVTEAYDYIEKLPLEPDARIWEALKKIARIHGDVDLEDYAEELMVA 759
            +HYLGVIDVLG  GH+ EA ++++K+P+EP A +WEAL+  ARIHG ++LED AEE++ A
Sbjct: 266  EHYLGVIDVLGKFGHINEAEEFVDKMPIEPTAEVWEALRNFARIHGAIELEDRAEEMLAA 325

Query: 758  LDPSXXXXXXXXXXXXXKRTAVNMLDGKNRLSEFRMTTYYKNDPKASAP------KEQGY 597
            LDPS             K+ AVNML+GKNR+SE+R T  YK D            +E GY
Sbjct: 326  LDPSKAITDKIPTPPQKKQLAVNMLEGKNRVSEYRSTNPYKGDAYEKLKGLNGQMREAGY 385

Query: 596  VPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKV 417
            VPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIK+
Sbjct: 386  VPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKI 445

Query: 416  MARIVGRELIVRDNKRFHHFKDGKCSCGDYW 324
            M++IVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 446  MSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 476


>ref|XP_004166669.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g15690-like [Cucumis sativus]
          Length = 588

 Score =  465 bits (1196), Expect = e-128
 Identities = 228/373 (61%), Positives = 275/373 (73%), Gaps = 3/373 (0%)
 Frame = -2

Query: 1433 DLIGLCRNGKIKEAVEFVSKGSITVNDAATFFELLNACGNLKLQEEARKVNDFLMRSPFR 1254
            +L   C  GK+KEAVE + +G     D   F  L   CG  K  + A+ V+D+ ++S  R
Sbjct: 218  ELRRFCGEGKLKEAVELLKQG--VKADVDCFHLLFELCGKSKSFDNAKVVHDYFLQSSCR 275

Query: 1253 GDLQLVNKSIEMLGKCASMSNARQLFDRMAERNLESWHLIIYGYAMNGQGDEGLELFEQM 1074
             DLQL N+ +EM G+C SMS+AR++FD M +R+++SWHL++ GYA NG GDEGLELFE M
Sbjct: 276  SDLQLNNEVLEMYGRCGSMSDARRVFDHMPDRSIDSWHLMMKGYADNGLGDEGLELFENM 335

Query: 1073 RKLGVQPNEQTFLAVLXXXXXXXXXXXSFTHLDLMKNEYGITPSVDHYLGVIDVLGSAGH 894
            + LG+QPN QTFL V+            F + + MKN+Y ITP  +HYLG++ +LG  GH
Sbjct: 336  KNLGLQPNSQTFLYVMSACASANAVEEGFLYFESMKNDYHITPDTNHYLGLLGILGEPGH 395

Query: 893  VTEAYDYIEKLPLEPDARIWEALKKIARIHGDVDLEDYAEELMVALDPSXXXXXXXXXXX 714
            + EA++Y+EKLP+EP   +WE LK  ARIHGDVDLEDYAEEL+V LDP+           
Sbjct: 396  IHEAFEYVEKLPMEPTVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAVSNKISTPP 455

Query: 713  XXKRTAVNMLDGKNRLSEFRMTTYYKNDPK---ASAPKEQGYVPDTRYVLHDIDQEAKEQ 543
                +A++MLDGKNR+ EFR  T YK+D K     A KEQGYVPDTRYVLHDIDQEAKEQ
Sbjct: 456  PKNXSAISMLDGKNRIVEFRNPTLYKDDXKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQ 515

Query: 542  ALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKVMARIVGRELIVRDNKRFH 363
            ALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIK+M+RIVGRELIVRDNKRFH
Sbjct: 516  ALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFH 575

Query: 362  HFKDGKCSCGDYW 324
            HFKDGKCSCGDYW
Sbjct: 576  HFKDGKCSCGDYW 588