BLASTX nr result

ID: Cimicifuga21_contig00003436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003436
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530870.1| conserved hypothetical protein [Ricinus comm...   303   3e-80
ref|XP_002304872.1| predicted protein [Populus trichocarpa] gi|1...   299   6e-79
ref|XP_004149017.1| PREDICTED: uncharacterized protein LOC101215...   291   2e-76
ref|XP_002285688.1| PREDICTED: uncharacterized protein LOC100250...   287   2e-75
ref|XP_002875563.1| hypothetical protein ARALYDRAFT_484754 [Arab...   287   3e-75

>ref|XP_002530870.1| conserved hypothetical protein [Ricinus communis]
           gi|223529559|gb|EEF31510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score =  303 bits (777), Expect = 3e-80
 Identities = 159/254 (62%), Positives = 189/254 (74%), Gaps = 12/254 (4%)
 Frame = -1

Query: 887 SLFQTSFSSPFRDTQFKIRRDPN-YPLLPKSLFPCFE-------RVLRRSSTIHTFNTNP 732
           SL Q+ ++  F+   +   +  N   LLPKSLFP F+       + L+R   +   +   
Sbjct: 4   SLVQSVYTPSFQSNNYNNTKIINPTSLLPKSLFPTFDTNGNHPTKTLKRFLYLTKRSFAT 63

Query: 731 KAAPTSINGSLIENPVVWAGRLCIYYALLKAGLVGSQATPLISHSDSQGSIT----DLGF 564
           +   T+ N SL+E PV+WAGRLCI+YALLK+GL GS+  PL+S  D  G       DLGF
Sbjct: 64  RKTVTTTNASLLETPVLWAGRLCIFYALLKSGLAGSKTNPLVSGLDGDGESAVESGDLGF 123

Query: 563 SKWLESLQGRSEEKEATDKRKLVKNWHPTTKGTLKRSYRVSSMSVGRRLLKAIASLLSDD 384
           SKWLE++QG+ + KEA D+RKLV  WHPTTKGTL+R+YRV S S GRRLLKAIASLLSDD
Sbjct: 124 SKWLENIQGKPD-KEAADRRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDD 182

Query: 383 DEFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVLEITAFPAGPLTEKDYAK 204
           D F++ATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLV+EITAFPAGPLTEKDY K
Sbjct: 183 DHFIEATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVVEITAFPAGPLTEKDYVK 242

Query: 203 AAKLEKVLRSGASI 162
           A KLE+VLRSG SI
Sbjct: 243 AEKLERVLRSGPSI 256


>ref|XP_002304872.1| predicted protein [Populus trichocarpa] gi|118488609|gb|ABK96117.1|
           unknown [Populus trichocarpa]
           gi|222842304|gb|EEE79851.1| predicted protein [Populus
           trichocarpa]
          Length = 256

 Score =  299 bits (766), Expect = 6e-79
 Identities = 163/256 (63%), Positives = 192/256 (75%), Gaps = 14/256 (5%)
 Frame = -1

Query: 887 SLFQTSFSSPFRD---TQFKIRRDPNYPLLPKSLFPCFERVLRRSSTIHTFNTNPK---- 729
           SL QT ++SPF+    T+F      +  LLPKSLFP F+   +  S +  FN N +    
Sbjct: 4   SLVQTIYTSPFQSKTLTRFN-SVIKSTTLLPKSLFPTFDCPSKTFSRLF-FNGNTRDRKL 61

Query: 728 --AAPTSINGSLIENPVVWAGRLCIYYALLKAGLVGSQATPLISHSDSQG-----SITDL 570
              A  +++ SLIE PV+W GRLCI+YALLKAGL GS+A PL+S  D  G        DL
Sbjct: 62  TAGASFTVHASLIEAPVLWVGRLCIFYALLKAGLAGSEANPLVSGLDGGGVGGGAESGDL 121

Query: 569 GFSKWLESLQGRSEEKEATDKRKLVKNWHPTTKGTLKRSYRVSSMSVGRRLLKAIASLLS 390
           GFSKW+E++QG+ + KEA DKRKLV  WHPTTKGTL+R+YRV S S G+R LKAIA+LLS
Sbjct: 122 GFSKWIEAIQGKPD-KEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGQRRLKAIAALLS 180

Query: 389 DDDEFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVLEITAFPAGPLTEKDY 210
           +DD FVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL++EITAFPAGPLTEKDY
Sbjct: 181 EDDYFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLLVEITAFPAGPLTEKDY 240

Query: 209 AKAAKLEKVLRSGASI 162
            KA KLE+VLRSG SI
Sbjct: 241 VKAEKLERVLRSGPSI 256


>ref|XP_004149017.1| PREDICTED: uncharacterized protein LOC101215704 [Cucumis sativus]
           gi|449502194|ref|XP_004161570.1| PREDICTED:
           uncharacterized protein LOC101227576 [Cucumis sativus]
          Length = 258

 Score =  291 bits (745), Expect = 2e-76
 Identities = 156/233 (66%), Positives = 177/233 (75%), Gaps = 16/233 (6%)
 Frame = -1

Query: 812 LLPKSLFPCFERVLRRSST--IHTFNT-------NPKAAPTSINGSLIENPVVWAGRLCI 660
           LLPKSLFP F    + + T  +H   T       N   +P+S   SLIE P++WAGRLCI
Sbjct: 27  LLPKSLFPGFPSHPKNALTTFLHFHKTRSNKSLSNTFNSPSSTRASLIEAPILWAGRLCI 86

Query: 659 YYALLKAGLVGSQATPLISHSD------SQG-SITDLGFSKWLESLQGRSEEKEATDKRK 501
           +YALL+AGL GSQ+ PLIS  D      S G S +DLGFSKWLES++G+  + EA DKRK
Sbjct: 87  FYALLRAGLAGSQSNPLISDLDLSYGGSSDGESSSDLGFSKWLESVRGKPVD-EAVDKRK 145

Query: 500 LVKNWHPTTKGTLKRSYRVSSMSVGRRLLKAIASLLSDDDEFVDATSHKGCQIRRESAHG 321
           LV  WHPTTKGTL+R+YRV S S GRRLLKAI SLLSDDD FVDATSHKGCQIRRESAHG
Sbjct: 146 LVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIMSLLSDDDHFVDATSHKGCQIRRESAHG 205

Query: 320 ESVCCNNVRALFDELPTPHLVLEITAFPAGPLTEKDYAKAAKLEKVLRSGASI 162
           ESVCCNNVRALFDELPTPHL++EIT FPAGPL E DY KA KLE+VLRSG S+
Sbjct: 206 ESVCCNNVRALFDELPTPHLIVEITPFPAGPLNENDYTKAEKLERVLRSGPSV 258


>ref|XP_002285688.1| PREDICTED: uncharacterized protein LOC100250156 [Vitis vinifera]
           gi|297746432|emb|CBI16488.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score =  287 bits (735), Expect = 2e-75
 Identities = 142/188 (75%), Positives = 160/188 (85%), Gaps = 3/188 (1%)
 Frame = -1

Query: 716 SINGSLIENPVVWAGRLCIYYALLKAGLVGSQATPLISHSDSQGS---ITDLGFSKWLES 546
           S + SL+E PV+WA R+C++YALLKAGL GSQA P +S  +S G+     DLGFSKWLES
Sbjct: 44  STHASLLEAPVLWASRICVFYALLKAGLAGSQANPFVSDLESDGNGDGAGDLGFSKWLES 103

Query: 545 LQGRSEEKEATDKRKLVKNWHPTTKGTLKRSYRVSSMSVGRRLLKAIASLLSDDDEFVDA 366
           LQ R+ EKEA+DKRKLV  WHPTTKGTL+R+YRV S S GRRLLKAIASLLSDDD F+DA
Sbjct: 104 LQ-RNPEKEASDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDA 162

Query: 365 TSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVLEITAFPAGPLTEKDYAKAAKLEK 186
           +SHKGCQIRRESAHGESVCCNNVRALFDELPTPHL++EIT FPAGPLTE DY KA KLEK
Sbjct: 163 SSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLTENDYVKAEKLEK 222

Query: 185 VLRSGASI 162
           VLRSG S+
Sbjct: 223 VLRSGPSV 230


>ref|XP_002875563.1| hypothetical protein ARALYDRAFT_484754 [Arabidopsis lyrata subsp.
           lyrata] gi|297321401|gb|EFH51822.1| hypothetical protein
           ARALYDRAFT_484754 [Arabidopsis lyrata subsp. lyrata]
          Length = 248

 Score =  287 bits (734), Expect = 3e-75
 Identities = 144/228 (63%), Positives = 172/228 (75%), Gaps = 6/228 (2%)
 Frame = -1

Query: 827 DPNYPLLPKSLFPCFERVLRRSSTIHTFNTNPKAAPT-SINGSLIENPVVWAGRLCIYYA 651
           +P+  LLPKS+FP          T+H F   PK     S   SL+E PV+WAGR+C++YA
Sbjct: 27  NPSCFLLPKSIFP------GSKLTLHRFFRYPKKISNGSARASLLETPVLWAGRICVFYA 80

Query: 650 LLKAGLVGSQATPLISHSDSQG-----SITDLGFSKWLESLQGRSEEKEATDKRKLVKNW 486
           L+KAG  GS++ P++S  DS G        DLGFSKWL++++G   +K+A DKRKLV  W
Sbjct: 81  LVKAGFAGSKSNPIVSGLDSGGVDVEDDGADLGFSKWLQNIKGNKPDKDAADKRKLVSKW 140

Query: 485 HPTTKGTLKRSYRVSSMSVGRRLLKAIASLLSDDDEFVDATSHKGCQIRRESAHGESVCC 306
           HPTTKGTL+R+YR+ S S G RLLKAIASLLSDDD F DATSHKGCQIRRESAHG+SVCC
Sbjct: 141 HPTTKGTLRRNYRIPSKSEGNRLLKAIASLLSDDDHFRDATSHKGCQIRRESAHGQSVCC 200

Query: 305 NNVRALFDELPTPHLVLEITAFPAGPLTEKDYAKAAKLEKVLRSGASI 162
           NNVRALFDELPTPHLV+EIT FPAGPLTE DY KA KLE++LRSG +I
Sbjct: 201 NNVRALFDELPTPHLVVEITPFPAGPLTENDYLKAEKLERILRSGPNI 248


Top