BLASTX nr result
ID: Cimicifuga21_contig00003402
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00003402
(1415 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 521 e-145
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 503 e-140
ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group] g... 447 e-123
gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indi... 447 e-123
dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare] 442 e-122
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
protein product [Vitis vinifera]
Length = 602
Score = 521 bits (1343), Expect = e-145
Identities = 271/413 (65%), Positives = 320/413 (77%), Gaps = 6/413 (1%)
Frame = -1
Query: 1223 QVVMRAKYKTSVKDPGVQGVLIMMEDKFSFTPDDPTSSVKLSVRVGSIKSHKVTKEGSHR 1044
+V+ RA+YKTSVKD GV GVL M EDKF F P+DPTSS + V IK HK +K GS++
Sbjct: 4 EVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNK 63
Query: 1043 QALLNLTLDSTVG--CIFEFEKFSERDVCRDFVSKVLTKHQAKQSSVKDPKAGSERHC-- 876
ALLNLT DS G IFEFE + +R+VCR+FV + L K KAGSE+
Sbjct: 64 PALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEAS------KAGSEQSAVK 117
Query: 875 --DEQLSTAEMELRMKLLQENSELQKLHKQFVISEVLTEAEFWATRKELLAVDARKTPKQ 702
DEQLST EME R+KLL+E+SELQKLHKQFV+S VLTEAEFWATRK+LL + +T KQ
Sbjct: 118 LFDEQLSTIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQ 177
Query: 701 LVGFKSAMIADVRPVTDGRSNKVTFNLTPEIIHQIFAEKPAVHKAYLNFVPRKMSEIDFW 522
VGFKSAMI+D++P+TDGR+N+VTFNLTPEIIHQIFAEKPAVH+A+LNFVP KM+E DFW
Sbjct: 178 RVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFW 237
Query: 521 KKYCRAEYLHKTRNXXXXXXXXXXXXXXAVFLKHDELLASEARRKLRRVDPTLDMEADQG 342
KYCRAEYLH TRN AVFLKHD++LA+EARRK+RRVDPTLDMEADQG
Sbjct: 238 NKYCRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQG 297
Query: 341 DDYMHLPDHGILRDGSKEIMDTEYDEYKRTLSQNLNQHAAVVLEGRAMDVALGDTQTVAE 162
DDYMHLPDHGI RDGSKEI+D +Y++Y+RTLSQ+LN+HAAVVLEGR +DV L DT+TVAE
Sbjct: 298 DDYMHLPDHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAE 357
Query: 161 ALSRSKQAELATETSDENAILARSEKVSRMAAIEDLQNPSDLPFAPLCIKDPR 3
AL++SK+ E A E SD + R E++SRM IEDLQ P DLPFA LCIKDPR
Sbjct: 358 ALAKSKRVEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPR 410
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 503 bits (1295), Expect = e-140
Identities = 273/456 (59%), Positives = 320/456 (70%), Gaps = 49/456 (10%)
Frame = -1
Query: 1223 QVVMRAKYKTSVKDPGVQGVLIMMEDKFSFTPDDPTSSVKLSVRVGSIKSHKVTKEGSHR 1044
+V+ RA+YKTSVKD GV GVL M EDKF F P+DPTSS + V IK HK +K GS++
Sbjct: 4 EVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNK 63
Query: 1043 QALLNLTLDSTVG--CIFEFEKFSERDVCRDFVSKVLTKHQAKQSSVKDPKAGSERHC-- 876
ALLNLT DS G IFEFE + +R+VCR+FV K L K KAGSE+
Sbjct: 64 PALLNLTQDSEKGGGYIFEFENYPDREVCREFVGKALAKFSEAS------KAGSEQSAVK 117
Query: 875 --DEQLSTAEMELRMKLLQEN--------------------------------------- 819
DEQLST EME R+KLL+E+
Sbjct: 118 LFDEQLSTIEMERRIKLLREDRHSVPEEKFGVLLLKGILPLFGETIIAMKLIDSGIASKV 177
Query: 818 ----SELQKLHKQFVISEVLTEAEFWATRKELLAVDARKTPKQLVGFKSAMIADVRPVTD 651
SELQKLHKQFV+S VLTEAEFWATRK+LL + +T KQ VGFKSAMI+D++P+TD
Sbjct: 178 KWDCSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKPLTD 237
Query: 650 GRSNKVTFNLTPEIIHQIFAEKPAVHKAYLNFVPRKMSEIDFWKKYCRAEYLHKTRNXXX 471
GR+N+VTFNLTPEIIHQIFAEKPAVH+A+LNFVP KM+E DFW KYCRAEYLH TRN
Sbjct: 238 GRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNTVA 297
Query: 470 XXXXXXXXXXXAVFLKHDELLASEARRKLRRVDPTLDMEADQGDDYMHLPDHGILRDGSK 291
AVFLKHD++LASEARRK+RRVDPTLDMEADQGDDYMHLPDHGI RDGSK
Sbjct: 298 AAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSK 357
Query: 290 EIMDTEYDEYKRTLSQNLNQHAAVVLEGRAMDVALGDTQTVAEALSRSKQAELATETSDE 111
EI+D +Y++Y+RTLSQ+LN+HAAVVLEGR +DV L DT+TVAEAL++SK+ E A E SD
Sbjct: 358 EIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDG 417
Query: 110 NAILARSEKVSRMAAIEDLQNPSDLPFAPLCIKDPR 3
+ R E++SRM IEDLQ P DLPFA LCIKDPR
Sbjct: 418 SVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPR 453
>ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group]
gi|38636938|dbj|BAD03200.1| unknown protein [Oryza sativa
Japonica Group] gi|113623552|dbj|BAF23497.1| Os08g0338200
[Oryza sativa Japonica Group]
gi|215686948|dbj|BAG90767.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 604
Score = 447 bits (1151), Expect = e-123
Identities = 242/408 (59%), Positives = 298/408 (73%), Gaps = 6/408 (1%)
Frame = -1
Query: 1208 AKYKTSVKDPGVQGVLIMMEDKFSFTPDDPTSSVKLSVRVGSIKSHKVTKEGSHRQA--L 1035
AKYKT++KDPG GVL M EDKF+FTP DP S++KL+V SIK HK K + A L
Sbjct: 8 AKYKTTLKDPGTTGVLRMNEDKFTFTPHDPRSAMKLNVDFRSIKGHKFNKVDGSKPAPPL 67
Query: 1034 LNLTLDSTVG--CIFEFEKFSERDVCRDFVSKVLTKHQAKQSSVKD--PKAGSERHCDEQ 867
LNL+ DS G +FEF+ + RD+ RDFV+KVL K Q + P+ +EQ
Sbjct: 68 LNLSKDSDKGGGYMFEFDNVTNRDLSRDFVAKVLGKQQGTIPPKPNVPPENSVTSTGEEQ 127
Query: 866 LSTAEMELRMKLLQENSELQKLHKQFVISEVLTEAEFWATRKELLAVDARKTPKQLVGFK 687
LS AEM+ RMKLLQE+SELQKLH +FV+ +L E+EFWATRK LL +A K KQ GFK
Sbjct: 128 LSAAEMQRRMKLLQEDSELQKLHMKFVLGNILQESEFWATRKNLLEDEANKGSKQRPGFK 187
Query: 686 SAMIADVRPVTDGRSNKVTFNLTPEIIHQIFAEKPAVHKAYLNFVPRKMSEIDFWKKYCR 507
SAM+ADVRP DGR+NKVTF+LT EIIHQIFAEKPAVH+A+L+FVP+KMSE DFW KY R
Sbjct: 188 SAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSEKDFWTKYFR 247
Query: 506 AEYLHKTRNXXXXXXXXXXXXXXAVFLKHDELLASEARRKLRRVDPTLDMEADQGDDYMH 327
AEYL +T+N A+FLK+D++LA EAR K++RVDPTLDMEAD GDDY+H
Sbjct: 248 AEYLLRTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYIH 307
Query: 326 LPDHGILRDGSKEIMDTEYDEYKRTLSQNLNQHAAVVLEGRAMDVALGDTQTVAEALSRS 147
LPDHGI+RDGSKE +D + + +RTLSQ+LN+HAAVVLEGR+ DV L DT+TVAEA++RS
Sbjct: 308 LPDHGIIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTVAEAIARS 367
Query: 146 KQAELATETSDENAILARSEKVSRMAAIEDLQNPSDLPFAPLCIKDPR 3
K+ ++ SD+ R KV+RM IEDLQ P LP+APLCIKDPR
Sbjct: 368 KKEPPSSSISDDTN-HERLVKVARMTEIEDLQAPRSLPYAPLCIKDPR 414
>gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indica Group]
gi|222640385|gb|EEE68517.1| hypothetical protein
OsJ_26954 [Oryza sativa Japonica Group]
Length = 625
Score = 447 bits (1151), Expect = e-123
Identities = 242/408 (59%), Positives = 298/408 (73%), Gaps = 6/408 (1%)
Frame = -1
Query: 1208 AKYKTSVKDPGVQGVLIMMEDKFSFTPDDPTSSVKLSVRVGSIKSHKVTKEGSHRQA--L 1035
AKYKT++KDPG GVL M EDKF+FTP DP S++KL+V SIK HK K + A L
Sbjct: 8 AKYKTTLKDPGTTGVLRMNEDKFTFTPHDPRSAMKLNVDFRSIKGHKFNKVDGSKPAPPL 67
Query: 1034 LNLTLDSTVG--CIFEFEKFSERDVCRDFVSKVLTKHQAKQSSVKD--PKAGSERHCDEQ 867
LNL+ DS G +FEF+ + RD+ RDFV+KVL K Q + P+ +EQ
Sbjct: 68 LNLSKDSDKGGGYMFEFDNVTNRDLSRDFVAKVLGKQQGTIPPKPNVPPENSVTSTGEEQ 127
Query: 866 LSTAEMELRMKLLQENSELQKLHKQFVISEVLTEAEFWATRKELLAVDARKTPKQLVGFK 687
LS AEM+ RMKLLQE+SELQKLH +FV+ +L E+EFWATRK LL +A K KQ GFK
Sbjct: 128 LSAAEMQRRMKLLQEDSELQKLHMKFVLGNILQESEFWATRKNLLEDEANKGSKQRPGFK 187
Query: 686 SAMIADVRPVTDGRSNKVTFNLTPEIIHQIFAEKPAVHKAYLNFVPRKMSEIDFWKKYCR 507
SAM+ADVRP DGR+NKVTF+LT EIIHQIFAEKPAVH+A+L+FVP+KMSE DFW KY R
Sbjct: 188 SAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSEKDFWTKYFR 247
Query: 506 AEYLHKTRNXXXXXXXXXXXXXXAVFLKHDELLASEARRKLRRVDPTLDMEADQGDDYMH 327
AEYL +T+N A+FLK+D++LA EAR K++RVDPTLDMEAD GDDY+H
Sbjct: 248 AEYLLRTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYIH 307
Query: 326 LPDHGILRDGSKEIMDTEYDEYKRTLSQNLNQHAAVVLEGRAMDVALGDTQTVAEALSRS 147
LPDHGI+RDGSKE +D + + +RTLSQ+LN+HAAVVLEGR+ DV L DT+TVAEA++RS
Sbjct: 308 LPDHGIIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTVAEAIARS 367
Query: 146 KQAELATETSDENAILARSEKVSRMAAIEDLQNPSDLPFAPLCIKDPR 3
K+ ++ SD+ R KV+RM IEDLQ P LP+APLCIKDPR
Sbjct: 368 KKEPPSSSISDDTN-HERLVKVARMTEIEDLQAPRSLPYAPLCIKDPR 414
>dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 442 bits (1138), Expect = e-122
Identities = 237/408 (58%), Positives = 297/408 (72%), Gaps = 6/408 (1%)
Frame = -1
Query: 1208 AKYKTSVKDPGVQGVLIMMEDKFSFTPDDPTSSVKLSVRVGSIKSHKVTKEGSHRQA--L 1035
AKYKT++KDPG GVL M EDK FTP+DP S +KLSV SIK HK K + L
Sbjct: 8 AKYKTTLKDPGHGGVLRMSEDKLIFTPNDPRSLMKLSVDFRSIKGHKFNKVDGSKPTPPL 67
Query: 1034 LNLTL--DSTVGCIFEFEKFSERDVCRDFVSKVLTKHQAKQSSVKD--PKAGSERHCDEQ 867
LNL+ D G IFEF+ RD+CRDFV++VL KHQ + + P+ + EQ
Sbjct: 68 LNLSKVSDKGGGYIFEFDNVGNRDLCRDFVARVLGKHQGTVPARPNVPPEKLAVSTGPEQ 127
Query: 866 LSTAEMELRMKLLQENSELQKLHKQFVISEVLTEAEFWATRKELLAVDARKTPKQLVGFK 687
LS+AEME RMKLL+E+SELQKLHK+FV+ +L E+EFWATRK LL + K+ KQ GFK
Sbjct: 128 LSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDETNKSSKQKPGFK 187
Query: 686 SAMIADVRPVTDGRSNKVTFNLTPEIIHQIFAEKPAVHKAYLNFVPRKMSEIDFWKKYCR 507
SAM+ADVRP DG++NKVTF+LT EIIHQIFAEKPAVH+A+L++VP+K+SE DFW KYCR
Sbjct: 188 SAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVPKKLSEKDFWTKYCR 247
Query: 506 AEYLHKTRNXXXXXXXXXXXXXXAVFLKHDELLASEARRKLRRVDPTLDMEADQGDDYMH 327
AEYL +T+N A+FLK+D++LA EA+ K++RVDPTLDMEAD GDDY+H
Sbjct: 248 AEYLLRTKNTLAAKAEAADDEELAMFLKNDDILAKEAKLKIKRVDPTLDMEADAGDDYIH 307
Query: 326 LPDHGILRDGSKEIMDTEYDEYKRTLSQNLNQHAAVVLEGRAMDVALGDTQTVAEALSRS 147
LPDHGILRDGS+E DT+ + +RTLSQ+LN+HAAVVLEGR+ D+ DT+TVAEAL+RS
Sbjct: 308 LPDHGILRDGSRETTDTDSELARRTLSQDLNRHAAVVLEGRSTDIESTDTKTVAEALARS 367
Query: 146 KQAELATETSDENAILARSEKVSRMAAIEDLQNPSDLPFAPLCIKDPR 3
K+ + +D+ A R K +RM +EDLQ P LP+APLCIKDPR
Sbjct: 368 KKEPPPSSVADD-ASHERLVKAARMTELEDLQAPRSLPYAPLCIKDPR 414