BLASTX nr result

ID: Cimicifuga21_contig00003334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003334
         (1159 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318236.1| predicted protein [Populus trichocarpa] gi|2...   338   1e-90
ref|XP_002322472.1| predicted protein [Populus trichocarpa] gi|2...   333   5e-89
gb|ABK94395.1| unknown [Populus trichocarpa]                          331   2e-88
emb|CBI22737.3| unnamed protein product [Vitis vinifera]              331   2e-88
ref|XP_004157224.1| PREDICTED: uncharacterized LOC101212555 [Cuc...   330   3e-88

>ref|XP_002318236.1| predicted protein [Populus trichocarpa] gi|222858909|gb|EEE96456.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  338 bits (868), Expect = 1e-90
 Identities = 169/278 (60%), Positives = 191/278 (68%)
 Frame = +1

Query: 55  MVSQRQKLARKKFKEEHPELFPKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNFKKH 234
           MVS+RQKLARK+FK EHPELFPK E                               F +H
Sbjct: 1   MVSKRQKLARKRFKGEHPELFPKPEPTLLKDPNKKKKKKSLLKRKKSDPNEPYKKGFGRH 60

Query: 235 PLRVPGMKPGESCFICKAKDHIAKLCPQKAEWEKNKICLLCRRRGHSLKNCPNKNDETNE 414
           PLRVPGMKPG+SCFICKAKDHIAKLCPQK+EWE+NKICLLCR RGHSLK CPNKNDET +
Sbjct: 61  PLRVPGMKPGDSCFICKAKDHIAKLCPQKSEWERNKICLLCRHRGHSLKRCPNKNDETMD 120

Query: 415 KKFCYNCGEAGHSLSNCSQPLQDGGTKFASCFICSERGHLSKNCPKNTHGVYPKGGSCKL 594
           +K CYNCGE GHSLS C QP +DGGTKFA+CFIC+ERGHLSK+CPKNT G+YPKGG CK+
Sbjct: 121 QKSCYNCGEKGHSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNTRGIYPKGGCCKV 180

Query: 595 CGEITHLARDCPNKGNKRSITAYGVRSTQIGGEYAQKPTRIKFSSGDDLDDDFTAVEANN 774
           CG +THLARDCP+KG  R   A G  +T  G E        KF SGD+LDDDF      +
Sbjct: 181 CGGVTHLARDCPDKG-LRGSAATGKEAT--GREVRPTGRVTKFVSGDELDDDFMTGNMYS 237

Query: 775 VDNDASSALESKSLPLVDDAEKSIPKKKQGPKVVNFLG 888
           +  D SS  +SK  P V        KKKQGPKVVNF+G
Sbjct: 238 IPEDKSS--DSKIDPSVSKDVHVKSKKKQGPKVVNFVG 273


>ref|XP_002322472.1| predicted protein [Populus trichocarpa] gi|222869468|gb|EEF06599.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score =  333 bits (854), Expect = 5e-89
 Identities = 168/283 (59%), Positives = 191/283 (67%), Gaps = 5/283 (1%)
 Frame = +1

Query: 55  MVSQRQKLARKKFKEEHPELFPKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN----- 219
           MVS+RQKLARK +KE+HPELFPK E                             N     
Sbjct: 1   MVSKRQKLARKIYKEDHPELFPKPEPTPPNDPNKMKKKKKKSLFKRKNSDPKDPNKANKK 60

Query: 220 NFKKHPLRVPGMKPGESCFICKAKDHIAKLCPQKAEWEKNKICLLCRRRGHSLKNCPNKN 399
            F+K PLRVPGMKPG+SCFICKAKDHIAKLCPQK EWEKNKICLLCR RGHSLK CP KN
Sbjct: 61  GFRKQPLRVPGMKPGDSCFICKAKDHIAKLCPQKDEWEKNKICLLCRHRGHSLKRCPKKN 120

Query: 400 DETNEKKFCYNCGEAGHSLSNCSQPLQDGGTKFASCFICSERGHLSKNCPKNTHGVYPKG 579
           DET ++K CYNCGE GHSLS C QP +DGGTKFA+CFIC+ERGHLSK+CPKNT G+YPKG
Sbjct: 121 DETMDQKLCYNCGETGHSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNTRGIYPKG 180

Query: 580 GSCKLCGEITHLARDCPNKGNKRSITAYGVRSTQIGGEYAQKPTRIKFSSGDDLDDDFTA 759
           G CKLCG +THLARDCP+KG KR   A+G     IG E        KF SGD+LDDDF  
Sbjct: 181 GCCKLCGGVTHLARDCPDKG-KRGDAAFG--RGAIGREVRPTGRVTKFVSGDELDDDFMT 237

Query: 760 VEANNVDNDASSALESKSLPLVDDAEKSIPKKKQGPKVVNFLG 888
               ++  D S+  +SK +P          KKKQGPK+VNF+G
Sbjct: 238 ENMYSIPKDKST--DSKVVPPDSKDGHVKSKKKQGPKIVNFVG 278


>gb|ABK94395.1| unknown [Populus trichocarpa]
          Length = 278

 Score =  331 bits (849), Expect = 2e-88
 Identities = 167/283 (59%), Positives = 190/283 (67%), Gaps = 5/283 (1%)
 Frame = +1

Query: 55  MVSQRQKLARKKFKEEHPELFPKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN----- 219
           MVS+RQKLARK +KE+HPELFPK E                             N     
Sbjct: 1   MVSKRQKLARKIYKEDHPELFPKPEPTPPNDPNKMKKKKKKSLFKRKNSDPKDPNKANKK 60

Query: 220 NFKKHPLRVPGMKPGESCFICKAKDHIAKLCPQKAEWEKNKICLLCRRRGHSLKNCPNKN 399
            F+K PLRVPGMKPG+SCFICKAKDHIAKLCPQK EWEKNKICLLCR RGHSLK CP KN
Sbjct: 61  GFRKQPLRVPGMKPGDSCFICKAKDHIAKLCPQKDEWEKNKICLLCRHRGHSLKRCPKKN 120

Query: 400 DETNEKKFCYNCGEAGHSLSNCSQPLQDGGTKFASCFICSERGHLSKNCPKNTHGVYPKG 579
           DET ++K CYNCGE GHSLS C QP +DGGTKFA+CFIC+ERGHLSK+CPKN  G+YPKG
Sbjct: 121 DETMDQKLCYNCGETGHSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNNRGIYPKG 180

Query: 580 GSCKLCGEITHLARDCPNKGNKRSITAYGVRSTQIGGEYAQKPTRIKFSSGDDLDDDFTA 759
           G CKLCG +THLARDCP+KG KR   A+G     IG E        KF SGD+LDDDF  
Sbjct: 181 GCCKLCGGVTHLARDCPDKG-KRGDAAFG--RGAIGREVRPTGRVTKFVSGDELDDDFMT 237

Query: 760 VEANNVDNDASSALESKSLPLVDDAEKSIPKKKQGPKVVNFLG 888
               ++  D S+  +SK +P          KKKQGPK+VNF+G
Sbjct: 238 ENMYSIPKDKST--DSKVVPPDSKDGHVKSKKKQGPKIVNFVG 278


>emb|CBI22737.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  331 bits (848), Expect = 2e-88
 Identities = 162/285 (56%), Positives = 195/285 (68%), Gaps = 7/285 (2%)
 Frame = +1

Query: 55  MVSQRQKLARKKFKEEHPELFPKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------ 216
           MVSQRQ+LAR+ +K+ HPELFPK E                                   
Sbjct: 1   MVSQRQRLARQIYKKAHPELFPKAEPAAPKDPTKKKKKKSKLKPKRAEMKGPKSTEKSDK 60

Query: 217 NNFKKHPLRVPGMKPGESCFICKAKDHIAKLCPQKAEWEKNKICLLCRRRGHSLKNCPNK 396
           +  +KHPLRVPGMKPGESCFICKAKDHIAK CP+KA+WE++KICLLCR+RGHSLKNCP+K
Sbjct: 61  SKLRKHPLRVPGMKPGESCFICKAKDHIAKHCPEKAQWERHKICLLCRQRGHSLKNCPDK 120

Query: 397 NDETNEKKFCYNCGEAGHSLSNCSQPLQDGGTKFASCFICSERGHLSKNCPKNTHGVYPK 576
            +E  +KK CYNCGE GHSL+NC QPLQ+GGTKFASCFIC+ERGHLSKNCPKN+HG+YPK
Sbjct: 121 GEEKLDKKLCYNCGETGHSLANCPQPLQEGGTKFASCFICNERGHLSKNCPKNSHGIYPK 180

Query: 577 GGSCKLCGEITHLARDCPNKGNKRSITAYGVRSTQIGGEYAQKPTRIKFSSGDDLDDDFT 756
           GG CK+CG +THLA+DCPNKG   S     V +   G ++ ++P   KF SGDDLDDDF 
Sbjct: 181 GGCCKICGGVTHLAKDCPNKGCNNS----PVAAIAGGIKHEERPKVTKFVSGDDLDDDFM 236

Query: 757 AVEANNVDNDASSALESKSLPLVDDAEKSI-PKKKQGPKVVNFLG 888
             +      + SS  E+K  P  +     + PKKKQGP VVNF+G
Sbjct: 237 VADTYTGYKEKSS--EAKVHPTPESKNSHVKPKKKQGPNVVNFVG 279


>ref|XP_004157224.1| PREDICTED: uncharacterized LOC101212555 [Cucumis sativus]
          Length = 396

 Score =  330 bits (847), Expect = 3e-88
 Identities = 168/284 (59%), Positives = 188/284 (66%), Gaps = 9/284 (3%)
 Frame = +1

Query: 55  MVSQRQKLARKKFKEEHPELFPKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNN---- 222
           MV+QRQ+LARKK+KEEHPELFPK E                             N     
Sbjct: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPNKPHKK 60

Query: 223 -FKKHPLRVPGMKPGESCFICKAKDHIAKLCPQKAEWEKNKICLLCRRRGHSLKNCPNKN 399
            FKKHPLRVPGMKPGESCFICKA DHIAKLCP+KA+WEKNKICLLCRRRGHSLKNCP+KN
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120

Query: 400 DETNEKKFCYNCGEAGHSLSNCSQPLQDGGTKFASCFICSERGHLSKNCPKNTHGVYPKG 579
           + T +KK CYNCGE GHSL+NCSQPLQDGGTKFASCFIC+E GHLSKNCPKNTHG+YPKG
Sbjct: 121 EGTVDKKLCYNCGETGHSLANCSQPLQDGGTKFASCFICNEGGHLSKNCPKNTHGIYPKG 180

Query: 580 GSCKLCGEITHLARDCPNKGNKRSITA--YGVRSTQIGGEYAQKPTR--IKFSSGDDLDD 747
           G CK CGE+THLA+DCP KG +    A  +G RS+     Y + P R   K  SGDDL+D
Sbjct: 181 GCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSS----GYVEMPRRPETKLISGDDLED 236

Query: 748 DFTAVEANNVDNDASSALESKSLPLVDDAEKSIPKKKQGPKVVN 879
           DF   E +    DA                     KK+GPKV N
Sbjct: 237 DFMIDEGSLQIKDAKMG------------------KKKGPKVAN 262


Top