BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003320
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   284   2e-74
ref|XP_003611248.1| 40S ribosomal protein S13 [Medicago truncatu...   283   2e-74
ref|XP_002511695.1| 40S ribosomal protein S13, putative [Ricinus...   283   3e-74
ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max] gi|3...   282   7e-74
gb|AFK48673.1| unknown [Lotus japonicus] gi|388521665|gb|AFK4889...   281   9e-74

>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|147820740|emb|CAN69640.1| hypothetical protein
           VITISV_028568 [Vitis vinifera]
           gi|296089171|emb|CBI38874.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  284 bits (726), Expect = 2e-74
 Identities = 142/151 (94%), Positives = 147/151 (97%)
 Frame = +1

Query: 118 MGRMHSSGKGISSSALPYKRTPPSWLKISSLEVDESICKFAKKGLTPSQIGVILRDSHGI 297
           MGRMHS GKGISSSALPYKRTPPSWLKISS +V+E+ICKFAKKG+TPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGI 60

Query: 298 AQVKYVTGSKILRILKAHGLAPEIPEDLYYLIKKAVAIRKHLERNRKDKDSKFRLILVES 477
           AQVK VTGSKILRILKAHGLAPEIPEDLY+LIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 478 RIHRLARYYKSTKKLPPVWKYESTTASTLVA 570
           RIHRLARYYK TKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKRTKKLPPVWKYESTTASTLVA 151


>ref|XP_003611248.1| 40S ribosomal protein S13 [Medicago truncatula]
           gi|355512583|gb|AES94206.1| 40S ribosomal protein S13
           [Medicago truncatula] gi|388501908|gb|AFK39020.1|
           unknown [Medicago truncatula]
          Length = 151

 Score =  283 bits (725), Expect = 2e-74
 Identities = 143/151 (94%), Positives = 146/151 (96%)
 Frame = +1

Query: 118 MGRMHSSGKGISSSALPYKRTPPSWLKISSLEVDESICKFAKKGLTPSQIGVILRDSHGI 297
           MGRMHS GKGISSSALPYKRT PSWLKISS EVDE+ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSKGKGISSSALPYKRTSPSWLKISSPEVDETICKFAKKGLTPSQIGVILRDSHGI 60

Query: 298 AQVKYVTGSKILRILKAHGLAPEIPEDLYYLIKKAVAIRKHLERNRKDKDSKFRLILVES 477
           AQVK VTGSKILRILKAHGLAPEIPEDLY+LIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 478 RIHRLARYYKSTKKLPPVWKYESTTASTLVA 570
           RIHRLARYYK TKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_002511695.1| 40S ribosomal protein S13, putative [Ricinus communis]
           gi|223548875|gb|EEF50364.1| 40S ribosomal protein S13,
           putative [Ricinus communis]
          Length = 151

 Score =  283 bits (724), Expect = 3e-74
 Identities = 142/151 (94%), Positives = 146/151 (96%)
 Frame = +1

Query: 118 MGRMHSSGKGISSSALPYKRTPPSWLKISSLEVDESICKFAKKGLTPSQIGVILRDSHGI 297
           MGRMHS GKGIS+SALPYKRTPPSWLKISS +VDE+ICKFAKKGL PSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVDENICKFAKKGLRPSQIGVILRDSHGI 60

Query: 298 AQVKYVTGSKILRILKAHGLAPEIPEDLYYLIKKAVAIRKHLERNRKDKDSKFRLILVES 477
           AQVK VTGSKILRILKAHGLAPEIPEDLY+LIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 478 RIHRLARYYKSTKKLPPVWKYESTTASTLVA 570
           RIHRLARYYK TKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max]
           gi|356514135|ref|XP_003525762.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|356514137|ref|XP_003525763.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|356563264|ref|XP_003549884.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|54039313|sp|P62302.1|RS13_SOYBN RecName: Full=40S
           ribosomal protein S13 gi|44662862|gb|AAS47510.1|
           ribosomal protein S13 [Glycine max]
           gi|161367348|gb|ABX71080.1| ribosomal protein S13
           [Glycine max] gi|255625887|gb|ACU13288.1| unknown
           [Glycine max]
          Length = 151

 Score =  282 bits (721), Expect = 7e-74
 Identities = 141/151 (93%), Positives = 146/151 (96%)
 Frame = +1

Query: 118 MGRMHSSGKGISSSALPYKRTPPSWLKISSLEVDESICKFAKKGLTPSQIGVILRDSHGI 297
           MGRMHS GKGISSSALPYKRTPPSWLKISS +V+E+ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 298 AQVKYVTGSKILRILKAHGLAPEIPEDLYYLIKKAVAIRKHLERNRKDKDSKFRLILVES 477
           AQV  VTGSKILRILKAHGLAPEIPEDLY+LIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 478 RIHRLARYYKSTKKLPPVWKYESTTASTLVA 570
           RIHRLARYYK TKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>gb|AFK48673.1| unknown [Lotus japonicus] gi|388521665|gb|AFK48894.1| unknown
           [Lotus japonicus]
          Length = 151

 Score =  281 bits (720), Expect = 9e-74
 Identities = 140/151 (92%), Positives = 147/151 (97%)
 Frame = +1

Query: 118 MGRMHSSGKGISSSALPYKRTPPSWLKISSLEVDESICKFAKKGLTPSQIGVILRDSHGI 297
           MGRMHS GKGISSSALPYKRTPPSWLKI+S +V+E+ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKIASQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 298 AQVKYVTGSKILRILKAHGLAPEIPEDLYYLIKKAVAIRKHLERNRKDKDSKFRLILVES 477
           AQV+ VTGSKILRILKAHGLAPEIPEDLY+LIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVRSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 478 RIHRLARYYKSTKKLPPVWKYESTTASTLVA 570
           RIHRLARYYK TKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151