BLASTX nr result

ID: Cimicifuga21_contig00003312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003312
         (1306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520485.1| conserved hypothetical protein [Ricinus comm...   117   8e-24
ref|XP_002275314.1| PREDICTED: uncharacterized protein LOC100252...   106   1e-20
ref|XP_002314144.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-19
ref|XP_002281905.1| PREDICTED: uncharacterized protein LOC100263...    99   2e-18
ref|XP_003516310.1| PREDICTED: uncharacterized protein LOC100775...    98   4e-18

>ref|XP_002520485.1| conserved hypothetical protein [Ricinus communis]
           gi|223540327|gb|EEF41898.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 160

 Score =  117 bits (292), Expect = 8e-24
 Identities = 74/175 (42%), Positives = 91/175 (52%), Gaps = 9/175 (5%)
 Frame = +3

Query: 330 ELFGPKGSTTKPKSSTGIFDSVFSQPSKY-----SRSEVTGSWKNKDSENQGWNSKQETS 494
           +LFG K S   P SSTGIF S+F  PSK      S SEV GSW+ + SENQGWN+K+   
Sbjct: 17  DLFGTKESP--PSSSTGIFASIFPPPSKVLGRKSSGSEVIGSWQRQSSENQGWNTKRGAP 74

Query: 495 GNSSQAGETQGSNAYNRGRNNIFQDNKVEPHYLSSSLYYGGQDVYSNPSDTRSSVSPHTX 674
             SS+A      N  N+ RN+   + + EP +LSSSLYYGGQD YS P  +R+S S    
Sbjct: 75  AMSSEAASY---NMPNKDRNSTLMEERGEPCHLSSSLYYGGQDNYSQPPSSRNSGS---- 127

Query: 675 XXXXXXXXXXXXXXXXXXXXXXXXXYKKXXXXXXPHGS----ASRGNWWQGGLYY 827
                                    +KK      P+G+    ASRGNWWQG LYY
Sbjct: 128 ----------------------YPIFKKDGVDDDPNGNNSNGASRGNWWQGSLYY 160


>ref|XP_002275314.1| PREDICTED: uncharacterized protein LOC100252790 isoform 1 [Vitis
           vinifera] gi|359481721|ref|XP_003632663.1| PREDICTED:
           uncharacterized protein LOC100252790 isoform 2 [Vitis
           vinifera] gi|297740289|emb|CBI30471.3| unnamed protein
           product [Vitis vinifera]
          Length = 159

 Score =  106 bits (264), Expect = 1e-20
 Identities = 63/169 (37%), Positives = 86/169 (50%), Gaps = 3/169 (1%)
 Frame = +3

Query: 330 ELFGPKGSTTKPKSSTGIFDSVFSQPSKYSRSEVTG---SWKNKDSENQGWNSKQETSGN 500
           +LFG K S+    SSTGIF S+FS  SK    E      + K +DS N+ WN+K  T+ N
Sbjct: 18  DLFGSKESSYPSPSSTGIFASIFSTSSKVLGRESLRPDLTKKKQDSGNEVWNAKPGTTEN 77

Query: 501 SSQAGETQGSNAYNRGRNNIFQDNKVEPHYLSSSLYYGGQDVYSNPSDTRSSVSPHTXXX 680
           + Q  E +  +  NR   + +Q+ +V+P +LSSS+YYGGQD+Y +P +++SS  P     
Sbjct: 78  ALQQSEGESQSISNRDTGSFYQEQRVQPCHLSSSIYYGGQDIYFHPQNSQSSGMPSML-- 135

Query: 681 XXXXXXXXXXXXXXXXXXXXXXXYKKXXXXXXPHGSASRGNWWQGGLYY 827
                                    K        GSASRGNWWQG LYY
Sbjct: 136 -------------------------KKDSGEDDTGSASRGNWWQGSLYY 159


>ref|XP_002314144.1| predicted protein [Populus trichocarpa] gi|222850552|gb|EEE88099.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score =  102 bits (253), Expect = 3e-19
 Identities = 68/175 (38%), Positives = 86/175 (49%), Gaps = 9/175 (5%)
 Frame = +3

Query: 330 ELFGPKGSTTKPKSSTGIFDSVFSQPS-----KYSRSEVTGSWKNKDSENQGWNSKQETS 494
           +LFG   S   P SS GIF S+F  PS     K S SEVTGSW+ +   NQ W  KQ + 
Sbjct: 20  DLFGTTESA--PVSSAGIFASMFPPPSTVVGRKSSGSEVTGSWQKQSYGNQAWYPKQGSP 77

Query: 495 GNSSQAGETQGSNAYNRGRNNIFQDNKVEPHYLSSSLYYGGQDVYSNPSDTRSSVSPHTX 674
            NS  A  +      ++ RN++ Q+ +VEP +LSSSLYYGGQ+ YS    T+ + S    
Sbjct: 78  ANSQAASYSMP----DKDRNSVIQEERVEPCHLSSSLYYGGQENYSQSPSTQMAGS---- 129

Query: 675 XXXXXXXXXXXXXXXXXXXXXXXXXYKKXXXXXXPHG----SASRGNWWQGGLYY 827
                                    +KK      P+G    SASRGNWWQG LYY
Sbjct: 130 ----------------------YPIFKKDGGEDDPNGSNPHSASRGNWWQGSLYY 162


>ref|XP_002281905.1| PREDICTED: uncharacterized protein LOC100263768 [Vitis vinifera]
           gi|297745986|emb|CBI16042.3| unnamed protein product
           [Vitis vinifera]
          Length = 154

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 66/169 (39%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
 Frame = +3

Query: 327 NELFGPKGSTTKPKSSTGIFDSVFSQPSKYSRSEVTGSWKNKDSENQGWNSKQETSGNSS 506
           +ELFG K S   P +S+GIF S+F  PS         S     S NQ W++KQ T  +  
Sbjct: 15  SELFGTKESP--PSNSSGIFASIFPPPSTAVGRNPANSEMRGLSGNQTWDTKQGTP-DMG 71

Query: 507 QAGETQGSNAYNRGRNNIFQDNKVEPHYLSSSLYYGGQDVYSNPSDTRSSVSPHTXXXXX 686
           ++G    S   N+ +N IFQ+ +VEP +LSSSLYYGGQD+YSN S T++S S        
Sbjct: 72  KSGVGASSIIPNKDKNQIFQEERVEPCHLSSSLYYGGQDIYSNSSSTQTSGS-------- 123

Query: 687 XXXXXXXXXXXXXXXXXXXXXYKKXXXXXXPHGS--ASRGNWWQGGLYY 827
                                +KK       + S  ASRGNWWQG LYY
Sbjct: 124 ------------------YPVFKKDEDDPNGNNSQGASRGNWWQGSLYY 154


>ref|XP_003516310.1| PREDICTED: uncharacterized protein LOC100775733 [Glycine max]
          Length = 153

 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 60/168 (35%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
 Frame = +3

Query: 327 NELFGPKGSTTKPKSSTGIFDSVFSQPS-KYSRSEVTGSWKNKDSENQGWNSKQETSGNS 503
           +ELFG K S  +P SS+GIF S+FS PS K    E   S  +    N+ W+S+     N 
Sbjct: 15  SELFGSKES--RPSSSSGIFGSIFSPPSSKVLGRESLRSEMSSKIANETWSSRIGIQDNF 72

Query: 504 SQAGETQGSNAYNRGRNNIFQDNKVEPHYLSSSLYYGGQDVYSNPSDTRSSVSPHTXXXX 683
           S+   ++  NA N+  ++I+QD +V+P +LSSS+YYGGQD+YSNP  T++          
Sbjct: 73  SKGYGSEAPNAVNKDMSSIYQDQRVQPCHLSSSIYYGGQDIYSNPQSTQNE--------- 123

Query: 684 XXXXXXXXXXXXXXXXXXXXXXYKKXXXXXXPHGSASRGNWWQGGLYY 827
                                   +          ASRG+WWQGGLYY
Sbjct: 124 ------------------GFNSMHRNDGGEDDSEFASRGDWWQGGLYY 153


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