BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003297
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285325.1| PREDICTED: photosystem II core complex prote...   176   6e-42
ref|XP_002315645.1| hypothetical protein POPTRDRAFT_726168 [Popu...   166   5e-39
gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]      163   3e-38
gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]      163   3e-38
ref|XP_002515034.1| photosystem II core complex proteins psbY, c...   155   9e-36

>ref|XP_002285325.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Vitis vinifera]
          Length = 201

 Score =  176 bits (445), Expect = 6e-42
 Identities = 101/189 (53%), Positives = 126/189 (66%), Gaps = 3/189 (1%)
 Frame = -3

Query: 760 AKCLSINSPNKLIPAKSTAKPLSLLSLQNLPKGLITTFNSIDDS---KMXXXXXXXXXXX 590
           AKCLSINSP  L  +K TAKP+SLLS+QNLPKGL T  +S + +    +           
Sbjct: 13  AKCLSINSPKNLNLSKPTAKPISLLSIQNLPKGLTTLKSSENQNLSTSLAGTAIAGAIFS 72

Query: 589 XLSSCDSAFAAQQVATIAEGDNRGXXXXXXXXXXXXXXLYNILQPALNQINRMTTSKXXX 410
            LSSCD A AAQQ+A IA+GDNRG              L+NILQPALNQ+N+M ++K   
Sbjct: 73  TLSSCDPALAAQQIAEIADGDNRGLALLLPIIPAIAWVLFNILQPALNQLNKMRSTKGVI 132

Query: 409 XXXXXXXLAATSLVDAPSALANEIATMAVASSSDNRGQLLLFVLVPAIAWVLFNILQPAL 230
                  LAA+  +  P A A+EIAT+A A+SSDNRGQLLLFV+ PAI WVL+NILQPAL
Sbjct: 133 IGLGLGGLAASGFMLTPHASASEIATLADAASSDNRGQLLLFVVTPAILWVLYNILQPAL 192

Query: 229 NQIDKMKSE 203
           NQ+++M+SE
Sbjct: 193 NQLNRMRSE 201


>ref|XP_002315645.1| hypothetical protein POPTRDRAFT_726168 [Populus trichocarpa]
           gi|118489255|gb|ABK96433.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222864685|gb|EEF01816.1|
           hypothetical protein POPTRDRAFT_726168 [Populus
           trichocarpa]
          Length = 196

 Score =  166 bits (420), Expect = 5e-39
 Identities = 98/186 (52%), Positives = 119/186 (63%)
 Frame = -3

Query: 760 AKCLSINSPNKLIPAKSTAKPLSLLSLQNLPKGLITTFNSIDDSKMXXXXXXXXXXXXLS 581
           AKCLSINS   + P K + KP+SLLS+QNLPKGL T     D++ +            LS
Sbjct: 13  AKCLSINSNKNISPTKPSTKPVSLLSMQNLPKGL-TISKPADNTVLTGTAIAGAIFTTLS 71

Query: 580 SCDSAFAAQQVATIAEGDNRGXXXXXXXXXXXXXXLYNILQPALNQINRMTTSKXXXXXX 401
           SC+ AFAAQQ+A IAEGDNRG              L+NILQPALNQINRM  +K      
Sbjct: 72  SCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQINRMRQTKGVIVGL 131

Query: 400 XXXXLAATSLVDAPSALANEIATMAVASSSDNRGQLLLFVLVPAIAWVLFNILQPALNQI 221
               LAA+  +  P A A+EIA +A A +SDNRG LLL V+ PAI WVL+NILQPALNQI
Sbjct: 132 GLGGLAASGFISTPHASASEIAMIADA-TSDNRGTLLLIVVAPAILWVLYNILQPALNQI 190

Query: 220 DKMKSE 203
           +KM+S+
Sbjct: 191 NKMRSQ 196


>gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score =  163 bits (413), Expect = 3e-38
 Identities = 97/186 (52%), Positives = 118/186 (63%)
 Frame = -3

Query: 760 AKCLSINSPNKLIPAKSTAKPLSLLSLQNLPKGLITTFNSIDDSKMXXXXXXXXXXXXLS 581
           AKCLSINS   + P K + KP+SLLS+ NLPKGL T     D++ +            LS
Sbjct: 13  AKCLSINSIKNISPPKPSTKPVSLLSMLNLPKGL-TISKPADNTVLTGTAIAGAIFTTLS 71

Query: 580 SCDSAFAAQQVATIAEGDNRGXXXXXXXXXXXXXXLYNILQPALNQINRMTTSKXXXXXX 401
           SC+ AFAAQQ+A IAEGDNRG              L+NILQPALNQINRM  +K      
Sbjct: 72  SCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALNQINRMRQTKGVIVGL 131

Query: 400 XXXXLAATSLVDAPSALANEIATMAVASSSDNRGQLLLFVLVPAIAWVLFNILQPALNQI 221
               LAA+  +  P A A+EIA +A A +SDNRG LLL V+ PAI WVL+NILQPALNQI
Sbjct: 132 GLGGLAASGFISTPDASASEIAMIAEA-TSDNRGTLLLIVVAPAILWVLYNILQPALNQI 190

Query: 220 DKMKSE 203
           +KM+S+
Sbjct: 191 NKMRSQ 196


>gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score =  163 bits (413), Expect = 3e-38
 Identities = 97/186 (52%), Positives = 118/186 (63%)
 Frame = -3

Query: 760 AKCLSINSPNKLIPAKSTAKPLSLLSLQNLPKGLITTFNSIDDSKMXXXXXXXXXXXXLS 581
           AKCLSINS   + P K + KP+SLLS+ NLPKGL T     D++ +            LS
Sbjct: 13  AKCLSINSIKNISPPKPSTKPVSLLSMLNLPKGL-TISKPADNTVLTGTAIAGAIFTTLS 71

Query: 580 SCDSAFAAQQVATIAEGDNRGXXXXXXXXXXXXXXLYNILQPALNQINRMTTSKXXXXXX 401
           SC+ AFAAQQ+A IAEGDNRG              L+NILQPALNQINRM  +K      
Sbjct: 72  SCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALNQINRMRQTKGVIVGL 131

Query: 400 XXXXLAATSLVDAPSALANEIATMAVASSSDNRGQLLLFVLVPAIAWVLFNILQPALNQI 221
               LAA+  +  P A A+EIA +A A +SDNRG LLL V+ PAI WVL+NILQPALNQI
Sbjct: 132 GLGGLAASGFISTPDASASEIAMIAEA-ASDNRGTLLLIVVAPAILWVLYNILQPALNQI 190

Query: 220 DKMKSE 203
           +KM+S+
Sbjct: 191 NKMRSQ 196


>ref|XP_002515034.1| photosystem II core complex proteins psbY, chloroplast precursor
           [Ricinus communis] gi|223546085|gb|EEF47588.1|
           photosystem II core complex proteins psbY, chloroplast
           precursor [Ricinus communis]
          Length = 195

 Score =  155 bits (392), Expect = 9e-36
 Identities = 93/186 (50%), Positives = 115/186 (61%), Gaps = 1/186 (0%)
 Frame = -3

Query: 757 KCLSINSPNKLIPAKSTAKPLSLLSLQNLPKGLITTFNSIDDSKMXXXXXXXXXXXXLSS 578
           KCLS  +  K I   +T KP+SLLS+Q LPKGL  +  + ++  +            LSS
Sbjct: 10  KCLSNINSGKNINKPTTTKPISLLSMQELPKGLTISKPTNENKLLAGTAIAGAIFSTLSS 69

Query: 577 CDSAFAAQQVATIAEGDNRGXXXXXXXXXXXXXXLYNILQPALNQINRMTTSKXXXXXXX 398
           CD AFAAQQ+A IAEGDNRG              L+NIL+PALNQINRM  +K       
Sbjct: 70  CDPAFAAQQIAEIAEGDNRGLALLLPIIPALGWVLFNILRPALNQINRMRETKGVIIGLG 129

Query: 397 XXXLAATS-LVDAPSALANEIATMAVASSSDNRGQLLLFVLVPAIAWVLFNILQPALNQI 221
              LAAT  +  AP A A+E   M   ++SDNRGQLLLFV+ PAI WVL+NILQPALNQI
Sbjct: 130 LGGLAATGFMAAAPEASASENIAMIADAASDNRGQLLLFVVAPAILWVLYNILQPALNQI 189

Query: 220 DKMKSE 203
           ++M+SE
Sbjct: 190 NRMRSE 195