BLASTX nr result

ID: Cimicifuga21_contig00003291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003291
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR173...   361   1e-97
gb|ABK22320.1| unknown [Picea sitchensis]                             359   7e-97
gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]             358   1e-96
ref|NP_001236946.1| uncharacterized protein LOC100305550 [Glycin...   358   1e-96
ref|XP_003543429.1| PREDICTED: 60S ribosomal protein L10a-1 [Gly...   358   1e-96

>gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR17372.1| unknown
           [Picea sitchensis]
          Length = 216

 Score =  361 bits (927), Expect = 1e-97
 Identities = 182/216 (84%), Positives = 193/216 (89%)
 Frame = -1

Query: 968 MSKLQSDVLREGISKIVSDSKVKQRKFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 789
           MSKLQSDVLRE IS++++DSK KQRKF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDVLREAISQVMADSKEKQRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 788 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKFHAFLASEAVIKQIP 609
           KMKVCMLGDAQHVEEAEK+GLDYMDVEG                K+HAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKLGLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 608 RLLGPGLNKAGKFPTLVSHQESLESKVNETKAMVKFQLKKVLCMGVAVGNLGMDEKQIFQ 429
           RLLGPGLNKAGKFPTLVSHQESLE KVNETKA VKFQLKKVLCMGVAVGN GM+EKQIFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEGKVNETKATVKFQLKKVLCMGVAVGNCGMEEKQIFQ 180

Query: 428 NVQLSVNFLVSLLKKNWQNVRCLYLKSSMGKPFRIF 321
           NVQLSVNFLVSLLKKNWQNVRCLYLK++MGKP RIF
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPNRIF 216


>gb|ABK22320.1| unknown [Picea sitchensis]
          Length = 216

 Score =  359 bits (921), Expect = 7e-97
 Identities = 179/216 (82%), Positives = 193/216 (89%)
 Frame = -1

Query: 968 MSKLQSDVLREGISKIVSDSKVKQRKFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 789
           MSKLQSDVLREGI++++ +SK K+RKF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDVLREGITQVMGESKDKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 788 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKFHAFLASEAVIKQIP 609
           KMKVCMLGDAQH+EEAEKI LDYMDVEG                K+HAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHIEEAEKISLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 608 RLLGPGLNKAGKFPTLVSHQESLESKVNETKAMVKFQLKKVLCMGVAVGNLGMDEKQIFQ 429
           RLLGPGLNKAGKFPTLVSHQESLESKVNETKA VKFQLKKVLCMGVAVGN GM+EKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNCGMEEKQVFQ 180

Query: 428 NVQLSVNFLVSLLKKNWQNVRCLYLKSSMGKPFRIF 321
           NVQLSVNFLVSLLKKNWQNVRCLYLKS+MGKP R+F
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKPARVF 216


>gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]
          Length = 216

 Score =  358 bits (920), Expect = 1e-96
 Identities = 180/216 (83%), Positives = 192/216 (88%)
 Frame = -1

Query: 968 MSKLQSDVLREGISKIVSDSKVKQRKFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 789
           MSKLQSDVLRE IS+I +DS+ K+R F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDVLREAISQITNDSREKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 788 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKFHAFLASEAVIKQIP 609
           KMKVCMLGDAQHVEEAEKIGLDYMDVE                 K+HAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 608 RLLGPGLNKAGKFPTLVSHQESLESKVNETKAMVKFQLKKVLCMGVAVGNLGMDEKQIFQ 429
           RLLGPGLNKAGKFPTLV+HQESLESKVNETKAMVKFQLKKVLCMGVAVGN  M+EKQIFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNCAMEEKQIFQ 180

Query: 428 NVQLSVNFLVSLLKKNWQNVRCLYLKSSMGKPFRIF 321
           NVQLSVNFLVSLLKKNWQNVRCLYLKS+MGKP+R+F
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKPYRVF 216


>ref|NP_001236946.1| uncharacterized protein LOC100305550 [Glycine max]
           gi|255625879|gb|ACU13284.1| unknown [Glycine max]
          Length = 216

 Score =  358 bits (919), Expect = 1e-96
 Identities = 181/216 (83%), Positives = 192/216 (88%)
 Frame = -1

Query: 968 MSKLQSDVLREGISKIVSDSKVKQRKFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 789
           MSKLQSD LRE IS I++DSK K RKFVET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISGIMTDSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 788 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKFHAFLASEAVIKQIP 609
           KMK+CMLGDAQHVEEAEKIGLDYMDVE                 K+HAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 608 RLLGPGLNKAGKFPTLVSHQESLESKVNETKAMVKFQLKKVLCMGVAVGNLGMDEKQIFQ 429
           RLLGPGLNKAGKFPTLV+HQESLESKVNETKAMVKFQLKKVLCMGVAVGN+ M+EKQIFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQ 180

Query: 428 NVQLSVNFLVSLLKKNWQNVRCLYLKSSMGKPFRIF 321
           NVQLSVNFLVSLLKKNWQNVRCLYLKS+MGK +R+F
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216


>ref|XP_003543429.1| PREDICTED: 60S ribosomal protein L10a-1 [Glycine max]
           gi|255632980|gb|ACU16844.1| unknown [Glycine max]
          Length = 216

 Score =  358 bits (919), Expect = 1e-96
 Identities = 181/216 (83%), Positives = 192/216 (88%)
 Frame = -1

Query: 968 MSKLQSDVLREGISKIVSDSKVKQRKFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 789
           MSKLQSD LRE IS I++DSK K RKFVET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISGIMADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 788 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKFHAFLASEAVIKQIP 609
           KMK+CMLGDAQHVEEAEKIGLDYMDVE                 K+HAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 608 RLLGPGLNKAGKFPTLVSHQESLESKVNETKAMVKFQLKKVLCMGVAVGNLGMDEKQIFQ 429
           RLLGPGLNKAGKFPTLV+HQESLESKVNETKAMVKFQLKKVLCMGVAVGN+ M+EKQIFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQ 180

Query: 428 NVQLSVNFLVSLLKKNWQNVRCLYLKSSMGKPFRIF 321
           NVQLSVNFLVSLLKKNWQNVRCLYLKS+MGK +R+F
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216


Top