BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003286
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR26371.1| mitochondrial inner membrane translocase TM17-2 [...   194   4e-47
ref|NP_181277.1| mitochondrial import inner membrane translocase...   194   4e-47
gb|AAF03749.1|AF186847_1 TIM17 [Arabidopsis thaliana]                 192   2e-46
gb|ABL97987.1| protein translocase [Brassica rapa]                    191   3e-46
emb|CBI27999.3| unnamed protein product [Vitis vinifera]              189   1e-45

>gb|AAR26371.1| mitochondrial inner membrane translocase TM17-2 [Arabidopsis
            thaliana]
          Length = 243

 Score =  194 bits (492), Expect = 4e-47
 Identities = 111/234 (47%), Positives = 130/234 (55%), Gaps = 34/234 (14%)
 Frame = -3

Query: 1008 DTGREPCPDRILDDVGGAFSMGAIGGSAYHFIRGALNSPKGSRFPGGLNVARMNAPRTGG 829
            +T REPCPDRILDD+GGAF MGA+GGSA+HFI+G  NSPKGSRF GG     MNAPRTGG
Sbjct: 5    ETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAPRTGG 64

Query: 828  GFAVWGGLFSTFDCTMVYLRQKEDPWNSVXXXXXXXGFLAMRQGPRSALFSAAXXXXXXX 649
             FAVWGGLFSTFDCTMVYLRQKEDPWNS+       GFL+MRQG  +A  SA        
Sbjct: 65   SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGGVLLA 124

Query: 648  XXXXXXIMFN-------SMNKEDPFGMGQPGMQ-------------------MEIXXXXX 547
                  IM N       +M  EDP   G PGMQ                   M++     
Sbjct: 125  LIEGAGIMLNEVLAQPQNMMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQMGQMQS 184

Query: 546  XXXP--------VANSAEGSSWGLGLFGRGKKQDTTSDVSREELLEGFETPSPP 409
                         A+S+  SSW  GLF + K++      S+ E+LE F+ P  P
Sbjct: 185  QAQIRSESQNQNTASSSSSSSWFGGLFDKKKEEVQPGSESKTEVLESFDAPPVP 238


>ref|NP_181277.1| mitochondrial import inner membrane translocase subunit Tim17
            [Arabidopsis thaliana] gi|42571095|ref|NP_973621.1|
            mitochondrial import inner membrane translocase subunit
            Tim17 [Arabidopsis thaliana]
            gi|12643851|sp|Q9SP35.2|TI172_ARATH RecName:
            Full=Mitochondrial import inner membrane translocase
            subunit TIM17-2 gi|13430692|gb|AAK25968.1|AF360258_1
            putative protein translocase [Arabidopsis thaliana]
            gi|4056494|gb|AAC98060.1| putative protein translocase
            [Arabidopsis thaliana] gi|14532896|gb|AAK64130.1|
            putative protein translocase [Arabidopsis thaliana]
            gi|15810186|gb|AAL06994.1| At2g37410/F3G5.20 [Arabidopsis
            thaliana] gi|330254300|gb|AEC09394.1| mitochondrial
            import inner membrane translocase subunit Tim17
            [Arabidopsis thaliana] gi|330254301|gb|AEC09395.1|
            mitochondrial import inner membrane translocase subunit
            Tim17 [Arabidopsis thaliana]
          Length = 243

 Score =  194 bits (492), Expect = 4e-47
 Identities = 111/234 (47%), Positives = 130/234 (55%), Gaps = 34/234 (14%)
 Frame = -3

Query: 1008 DTGREPCPDRILDDVGGAFSMGAIGGSAYHFIRGALNSPKGSRFPGGLNVARMNAPRTGG 829
            +T REPCPDRILDD+GGAF MGA+GGSA+HFI+G  NSPKGSRF GG     MNAPRTGG
Sbjct: 5    ETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAPRTGG 64

Query: 828  GFAVWGGLFSTFDCTMVYLRQKEDPWNSVXXXXXXXGFLAMRQGPRSALFSAAXXXXXXX 649
             FAVWGGLFSTFDCTMVYLRQKEDPWNS+       GFL+MRQG  +A  SA        
Sbjct: 65   SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGGVLLA 124

Query: 648  XXXXXXIMFN-------SMNKEDPFGMGQPGMQ-------------------MEIXXXXX 547
                  IM N       +M  EDP   G PGMQ                   M++     
Sbjct: 125  LIEGAGIMLNKVLAQPQNMMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQMGQMQS 184

Query: 546  XXXP--------VANSAEGSSWGLGLFGRGKKQDTTSDVSREELLEGFETPSPP 409
                         A+S+  SSW  GLF + K++      S+ E+LE F+ P  P
Sbjct: 185  QAQIRSESQNQNTASSSSSSSWFGGLFDKKKEEVQPGSESKTEVLESFDAPPVP 238


>gb|AAF03749.1|AF186847_1 TIM17 [Arabidopsis thaliana]
          Length = 243

 Score =  192 bits (487), Expect = 2e-46
 Identities = 110/234 (47%), Positives = 129/234 (55%), Gaps = 34/234 (14%)
 Frame = -3

Query: 1008 DTGREPCPDRILDDVGGAFSMGAIGGSAYHFIRGALNSPKGSRFPGGLNVARMNAPRTGG 829
            +T REPCPDRILDD+GGAF MGA+GGSA+HFI+G  NSPKGSRF GG     MNAPRTGG
Sbjct: 5    ETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAPRTGG 64

Query: 828  GFAVWGGLFSTFDCTMVYLRQKEDPWNSVXXXXXXXGFLAMRQGPRSALFSAAXXXXXXX 649
             FAVWGGLFSTFDCTMVYLRQKEDPWNS+       GFL+MRQG  +A  S         
Sbjct: 65   SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSTIFGGVLLA 124

Query: 648  XXXXXXIMFN-------SMNKEDPFGMGQPGMQ-------------------MEIXXXXX 547
                  IM N       +M  EDP   G PGMQ                   M++     
Sbjct: 125  LIEGAGIMLNKVLAQPQNMMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQMGQMQS 184

Query: 546  XXXP--------VANSAEGSSWGLGLFGRGKKQDTTSDVSREELLEGFETPSPP 409
                         A+S+  SSW  GLF + K++      S+ E+LE F+ P  P
Sbjct: 185  QAQIRSESQNQNTASSSSSSSWFGGLFDKKKEEVHPGSESKTEVLESFDAPPVP 238


>gb|ABL97987.1| protein translocase [Brassica rapa]
          Length = 220

 Score =  191 bits (485), Expect = 3e-46
 Identities = 110/213 (51%), Positives = 132/213 (61%), Gaps = 13/213 (6%)
 Frame = -3

Query: 1008 DTGREPCPDRILDDVGGAFSMGAIGGSAYHFIRGALNSPKGSRFPGGLNVARMNAPRTGG 829
            ++ REPCPDRILDD+GGAF MGA+GGSA+HF++G  NSPKGSRF GG     MNAPR GG
Sbjct: 5    ESSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGTYNSPKGSRFLGGKQAVAMNAPRLGG 64

Query: 828  GFAVWGGLFSTFDCTMVYLRQKEDPWNSVXXXXXXXGFLAMRQGPRSALFSAAXXXXXXX 649
             FAVWGGLFSTFDC+MVYLRQKEDPWNS+       GFL+MRQGP +A+ SA        
Sbjct: 65   SFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLSMRQGPNAAVRSALVGGVLLA 124

Query: 648  XXXXXXIMFNSMNKEDPF-----GM-GQPGMQM-----EIXXXXXXXXPVANSAEGSSWG 502
                  I  N M  E        GM G PG+QM     ++        P  N+A  SSW 
Sbjct: 125  LIEGAGIALNKMMAEPQHMQMEEGMAGVPGIQMGQQQQQVPNQGQMIPPPENTA-SSSWF 183

Query: 501  LGLFGRGKKQDT--TSDVSREELLEGFETPSPP 409
             GLFG+ K ++T  TS  S  ++LE F+ P  P
Sbjct: 184  GGLFGK-KNEETQPTSSGSETKVLESFDAPPVP 215


>emb|CBI27999.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  189 bits (480), Expect = 1e-45
 Identities = 105/209 (50%), Positives = 123/209 (58%), Gaps = 10/209 (4%)
 Frame = -3

Query: 1008 DTGREPCPDRILDDVGGAFSMGAIGGSAYHFIRGALNSPKGSRFPGGLNVARMNAPRTGG 829
            +T REPCPDRILDDVGGAF MGA+GGSA+HF++G  NSPKG R  GG    RMNAPR GG
Sbjct: 5    ETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERVIGGSQAVRMNAPRVGG 64

Query: 828  GFAVWGGLFSTFDCTMVYLRQKEDPWNSVXXXXXXXGFLAMRQGPRSALFSAAXXXXXXX 649
             FAVWGGLFS FDCTMVY+RQKEDPWNS+       GFL MRQG  ++  SA        
Sbjct: 65   SFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLAASTRSAIFGGVLLG 124

Query: 648  XXXXXXIMFNS---------MNKEDPFGMGQPGMQMEIXXXXXXXXPVANSAEGSSWGLG 496
                  IM N          M  E+P     PG                 S+  SSW  G
Sbjct: 125  LIEGAGIMLNKVLSAPQNLPMTMEEPVPGMTPG---------------PPSSGSSSWFGG 169

Query: 495  LFGRGKKQDTTSDV-SREELLEGFETPSP 412
            LFG GKKQ+  ++  S+ E+LE F+TP+P
Sbjct: 170  LFGGGKKQEPAANSGSKTEILESFDTPTP 198