BLASTX nr result

ID: Cimicifuga21_contig00003278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003278
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239979.1| uncharacterized protein LOC100792638 [Glycin...   341   2e-91
gb|AAS46232.1| methionine sulfoxide reductase A [Populus trichoc...   336   4e-90
ref|XP_002322323.1| methionine sulfoxide reductase type [Populus...   334   2e-89
gb|ACU23811.1| unknown [Glycine max]                                  334   2e-89
gb|ABK95276.1| unknown [Populus trichocarpa]                          334   2e-89

>ref|NP_001239979.1| uncharacterized protein LOC100792638 [Glycine max]
           gi|255639959|gb|ACU20272.1| unknown [Glycine max]
          Length = 265

 Score =  341 bits (874), Expect = 2e-91
 Identities = 161/205 (78%), Positives = 176/205 (85%)
 Frame = -2

Query: 818 KIPMSWLSKLGFGNKASEITMDSSIPQGPDEDIXXXXXXXXXXXXGCFWGVELAFQRVPG 639
           K  M+ L++LGFG+  +   MDSSIPQGPD+DI            GCFWGVELAFQRVPG
Sbjct: 61  KPSMNLLNRLGFGSARATENMDSSIPQGPDDDIPAPGQQFAEFGAGCFWGVELAFQRVPG 120

Query: 638 VSKTEVGYTQGLLHNPTYNDVCSGTTNHSEVVRVQYDPKECSFENLLEMFWSRHDPTTLN 459
           V+KTEVGYTQGL+HNPTY DVC+GTTNHSEVVR+QYDPK CS+E LL+MFWSRHDPTTLN
Sbjct: 121 VTKTEVGYTQGLVHNPTYEDVCTGTTNHSEVVRIQYDPKNCSYETLLDMFWSRHDPTTLN 180

Query: 458 RQGGDVGTQYRSGIYFYTPEQEQLAKESLEKQQKILNRKIVTEILPAKKFYRAEEYHQQY 279
           RQG DVGTQYRSGIY+YTPEQE+ AKESLE+QQK LNRKIVTEILPAKKFYRAEEYHQQY
Sbjct: 181 RQGNDVGTQYRSGIYYYTPEQEKAAKESLEQQQKQLNRKIVTEILPAKKFYRAEEYHQQY 240

Query: 278 LAKGGRFGFKQSTDKGCNDPIRCYG 204
           L KGGRFGFKQS  KGCNDPIRCYG
Sbjct: 241 LEKGGRFGFKQSASKGCNDPIRCYG 265


>gb|AAS46232.1| methionine sulfoxide reductase A [Populus trichocarpa x Populus
           deltoides]
          Length = 261

 Score =  336 bits (862), Expect = 4e-90
 Identities = 157/200 (78%), Positives = 176/200 (88%), Gaps = 1/200 (0%)
 Frame = -2

Query: 800 LSKLGFGNKASE-ITMDSSIPQGPDEDIXXXXXXXXXXXXGCFWGVELAFQRVPGVSKTE 624
           LSKLGFG ++ +  TMD +IPQGPD+D+            GCFWGVELAFQRVPGV+KTE
Sbjct: 62  LSKLGFGTRSPDPSTMDPTIPQGPDDDLPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTE 121

Query: 623 VGYTQGLLHNPTYNDVCSGTTNHSEVVRVQYDPKECSFENLLEMFWSRHDPTTLNRQGGD 444
           VGYTQGLLHNPTY DVC+GTTNH+EVVRVQYDPKECSF+ L+++ W+RHDPTTLNRQG D
Sbjct: 122 VGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLWARHDPTTLNRQGND 181

Query: 443 VGTQYRSGIYFYTPEQEQLAKESLEKQQKILNRKIVTEILPAKKFYRAEEYHQQYLAKGG 264
           VGTQYRSGIY+YTPEQE+ AKESLE+QQK+LNRKIVTEILPAKKFYRAEEYHQQYLAKGG
Sbjct: 182 VGTQYRSGIYYYTPEQEKAAKESLERQQKLLNRKIVTEILPAKKFYRAEEYHQQYLAKGG 241

Query: 263 RFGFKQSTDKGCNDPIRCYG 204
           RFGF QS +KGCNDPIRCYG
Sbjct: 242 RFGFMQSAEKGCNDPIRCYG 261


>ref|XP_002322323.1| methionine sulfoxide reductase type [Populus trichocarpa]
           gi|222869319|gb|EEF06450.1| methionine sulfoxide
           reductase type [Populus trichocarpa]
          Length = 203

 Score =  334 bits (857), Expect = 2e-89
 Identities = 157/203 (77%), Positives = 177/203 (87%), Gaps = 1/203 (0%)
 Frame = -2

Query: 809 MSWLSKLGFGNKASE-ITMDSSIPQGPDEDIXXXXXXXXXXXXGCFWGVELAFQRVPGVS 633
           M+ L+KLGFG ++ +  TMD +IPQGPD+D+            GCFWGVELAFQRVPGV+
Sbjct: 1   MNILNKLGFGPRSPDPSTMDPTIPQGPDDDLPAPGQQFAQFGAGCFWGVELAFQRVPGVT 60

Query: 632 KTEVGYTQGLLHNPTYNDVCSGTTNHSEVVRVQYDPKECSFENLLEMFWSRHDPTTLNRQ 453
           KTEVGYTQGLLHNPTY DVCSGTTNH+EVVRVQYDPKECSF+ LL++ W+RHDPT LNRQ
Sbjct: 61  KTEVGYTQGLLHNPTYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDVLWARHDPTALNRQ 120

Query: 452 GGDVGTQYRSGIYFYTPEQEQLAKESLEKQQKILNRKIVTEILPAKKFYRAEEYHQQYLA 273
           G DVGTQYRSGIY+YTPEQE+ AKESLE+QQK+LNRKIVTEILPAKKFYRAEEYHQQYLA
Sbjct: 121 GNDVGTQYRSGIYYYTPEQEKAAKESLERQQKLLNRKIVTEILPAKKFYRAEEYHQQYLA 180

Query: 272 KGGRFGFKQSTDKGCNDPIRCYG 204
           KGGRFGF QS +KGCNDPI+CYG
Sbjct: 181 KGGRFGFMQSAEKGCNDPIKCYG 203


>gb|ACU23811.1| unknown [Glycine max]
          Length = 266

 Score =  334 bits (856), Expect = 2e-89
 Identities = 162/214 (75%), Positives = 179/214 (83%), Gaps = 1/214 (0%)
 Frame = -2

Query: 842 QTSRSHSIKIP-MSWLSKLGFGNKASEITMDSSIPQGPDEDIXXXXXXXXXXXXGCFWGV 666
           QT    S+  P M+ L++LGFG+  +   MDSSIPQGPD+DI            GCFWGV
Sbjct: 53  QTRPHISVNKPSMNPLNRLGFGSARAPENMDSSIPQGPDDDIPAPGQQFAEFGAGCFWGV 112

Query: 665 ELAFQRVPGVSKTEVGYTQGLLHNPTYNDVCSGTTNHSEVVRVQYDPKECSFENLLEMFW 486
           ELAFQRVPGV+KTEVGYTQGL+HNPTY DVC+GTTNHSEVVRVQYDPK CS+E LL++FW
Sbjct: 113 ELAFQRVPGVTKTEVGYTQGLVHNPTYEDVCTGTTNHSEVVRVQYDPKICSYETLLDVFW 172

Query: 485 SRHDPTTLNRQGGDVGTQYRSGIYFYTPEQEQLAKESLEKQQKILNRKIVTEILPAKKFY 306
           +RHDPTTLNRQG DVGTQYRSGIY+YTPEQE+ AKESLE+QQK LNRKIVTEILPAKKFY
Sbjct: 173 ARHDPTTLNRQGNDVGTQYRSGIYYYTPEQEKAAKESLEQQQKQLNRKIVTEILPAKKFY 232

Query: 305 RAEEYHQQYLAKGGRFGFKQSTDKGCNDPIRCYG 204
           RAEEYHQQYL KGGR GFKQS  KGCNDPIRCYG
Sbjct: 233 RAEEYHQQYLEKGGRSGFKQSASKGCNDPIRCYG 266


>gb|ABK95276.1| unknown [Populus trichocarpa]
          Length = 260

 Score =  334 bits (856), Expect = 2e-89
 Identities = 159/206 (77%), Positives = 178/206 (86%), Gaps = 1/206 (0%)
 Frame = -2

Query: 818 KIPMSWLSKLGFGNKASE-ITMDSSIPQGPDEDIXXXXXXXXXXXXGCFWGVELAFQRVP 642
           K PM+ LSKLGFG ++ +  TMD +IPQGPD+D+            GCFWGVELAFQRVP
Sbjct: 55  KPPMNILSKLGFGTRSPDPSTMDPTIPQGPDDDLPAPGQQFAQFGAGCFWGVELAFQRVP 114

Query: 641 GVSKTEVGYTQGLLHNPTYNDVCSGTTNHSEVVRVQYDPKECSFENLLEMFWSRHDPTTL 462
           GV+KTEVGYTQGL HNP+Y DVC+GTT HSEVVRVQYDPKE SFE LL+ FW+RHDPTTL
Sbjct: 115 GVTKTEVGYTQGLSHNPSYEDVCTGTTKHSEVVRVQYDPKEGSFETLLDAFWARHDPTTL 174

Query: 461 NRQGGDVGTQYRSGIYFYTPEQEQLAKESLEKQQKILNRKIVTEILPAKKFYRAEEYHQQ 282
           NRQG DVGTQYRSGIY+YTPEQE+ AKES+E+QQK+ NRKIVTEILPAKKFYRAEEYHQQ
Sbjct: 175 NRQGNDVGTQYRSGIYYYTPEQEKAAKESMEQQQKLSNRKIVTEILPAKKFYRAEEYHQQ 234

Query: 281 YLAKGGRFGFKQSTDKGCNDPIRCYG 204
           YLAKGGRFGFKQS++KGCNDPIRCYG
Sbjct: 235 YLAKGGRFGFKQSSEKGCNDPIRCYG 260


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