BLASTX nr result

ID: Cimicifuga21_contig00003276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003276
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vini...   253   2e-85
emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera]   253   2e-85
emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera]   242   4e-81
ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vini...   238   4e-80
ref|XP_002314703.1| predicted protein [Populus trichocarpa] gi|2...   237   5e-76

>ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera]
           gi|297737034|emb|CBI26235.3| unnamed protein product
           [Vitis vinifera]
          Length = 674

 Score =  253 bits (646), Expect(2) = 2e-85
 Identities = 114/161 (70%), Positives = 134/161 (83%)
 Frame = -2

Query: 486 YTGFGYPLFTFEEQIAANQLPLKYAPFIASISKRKLKLEEVACESYSVGWFGGREKDKRE 307
           Y+G GYPL T EEQ AA++LPL Y PFIASI KRKLKL +V C +++VGWFG  EK +R 
Sbjct: 117 YSGHGYPLLTSEEQTAASELPLTYPPFIASIRKRKLKLSDVVCSTFTVGWFG-EEKSRRV 175

Query: 306 LKILCYYLDGSVNLYVRPLEGLTVVVDLDEMKITRYYDRFVVPVPNVEGTEYRASKQKPP 127
           LKILC+Y DG+ NLY+RP+EG+T+VVDLDEMKIT Y+DR  VP+P  EGTEYR SKQKPP
Sbjct: 176 LKILCFYTDGTANLYMRPIEGVTIVVDLDEMKITEYHDRLTVPMPEAEGTEYRLSKQKPP 235

Query: 126 FGPSLNGITVVQPDGPGFKIDGHTIRWANWDFHLGFDIRAG 4
           FGP LNG++ +QPDGPGFKIDGH IRWANWDFH+ FD RAG
Sbjct: 236 FGPRLNGVSSMQPDGPGFKIDGHNIRWANWDFHVSFDARAG 276



 Score = 89.4 bits (220), Expect(2) = 2e-85
 Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
 Frame = -3

Query: 749 FQYVGLDDPDKQAILSWHSS-NHTTQSPPRRAFVITRTNKQTIETIVDLQTHSILSSKFY 573
           FQYVGLD+PDK A+LSW S+ N TT  PPRRAFVITR + QT E IVDL T SI+S K Y
Sbjct: 58  FQYVGLDEPDKPALLSWLSNPNSTTLPPPRRAFVITRLHSQTHEIIVDLSTQSIVSDKVY 117

Query: 572 TGFGYP 555
           +G GYP
Sbjct: 118 SGHGYP 123


>emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera]
          Length = 644

 Score =  253 bits (646), Expect(2) = 2e-85
 Identities = 114/161 (70%), Positives = 134/161 (83%)
 Frame = -2

Query: 486 YTGFGYPLFTFEEQIAANQLPLKYAPFIASISKRKLKLEEVACESYSVGWFGGREKDKRE 307
           Y+G GYPL T EEQ AA++LPL Y PFIASI KRKLKL +V C +++VGWFG  EK +R 
Sbjct: 117 YSGHGYPLLTSEEQTAASELPLTYPPFIASIRKRKLKLSDVVCSTFTVGWFG-EEKSRRV 175

Query: 306 LKILCYYLDGSVNLYVRPLEGLTVVVDLDEMKITRYYDRFVVPVPNVEGTEYRASKQKPP 127
           LKILC+Y DG+ NLY+RP+EG+T+VVDLDEMKIT Y+DR  VP+P  EGTEYR SKQKPP
Sbjct: 176 LKILCFYTDGTANLYMRPIEGVTIVVDLDEMKITEYHDRLTVPMPEAEGTEYRLSKQKPP 235

Query: 126 FGPSLNGITVVQPDGPGFKIDGHTIRWANWDFHLGFDIRAG 4
           FGP LNG++ +QPDGPGFKIDGH IRWANWDFH+ FD RAG
Sbjct: 236 FGPRLNGVSSMQPDGPGFKIDGHNIRWANWDFHVSFDARAG 276



 Score = 89.4 bits (220), Expect(2) = 2e-85
 Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
 Frame = -3

Query: 749 FQYVGLDDPDKQAILSWHSS-NHTTQSPPRRAFVITRTNKQTIETIVDLQTHSILSSKFY 573
           FQYVGLD+PDK A+LSW S+ N TT  PPRRAFVITR + QT E IVDL T SI+S K Y
Sbjct: 58  FQYVGLDEPDKPALLSWLSNPNSTTLPPPRRAFVITRLHSQTHEIIVDLSTQSIVSDKVY 117

Query: 572 TGFGYP 555
           +G GYP
Sbjct: 118 SGHGYP 123


>emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera]
          Length = 654

 Score =  242 bits (617), Expect(2) = 4e-81
 Identities = 108/161 (67%), Positives = 129/161 (80%)
 Frame = -2

Query: 486 YTGFGYPLFTFEEQIAANQLPLKYAPFIASISKRKLKLEEVACESYSVGWFGGREKDKRE 307
           Y G GYPL T EEQ AA+ LPL Y PFIASI+KR LKL +V C +++VGWFG  +K +R 
Sbjct: 112 YGGHGYPLLTSEEQTAASVLPLTYPPFIASITKRSLKLSDVVCSTFTVGWFG-EDKSRRV 170

Query: 306 LKILCYYLDGSVNLYVRPLEGLTVVVDLDEMKITRYYDRFVVPVPNVEGTEYRASKQKPP 127
           LKI C+Y DG+ NLY+RP+EG+T+VVDLD+MKI  YYDR +VPVP  EGTEYR SKQ PP
Sbjct: 171 LKIPCFYTDGTANLYMRPIEGVTIVVDLDDMKIIEYYDRLMVPVPEAEGTEYRLSKQNPP 230

Query: 126 FGPSLNGITVVQPDGPGFKIDGHTIRWANWDFHLGFDIRAG 4
           FGP LNG++ + PDGPGFKIDGH +RWANWDFH+ FD RAG
Sbjct: 231 FGPPLNGVSAMPPDGPGFKIDGHNVRWANWDFHISFDARAG 271



 Score = 86.3 bits (212), Expect(2) = 4e-81
 Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = -3

Query: 749 FQYVGLDDPDKQAILSWHSS-NHTTQSPPRRAFVITRTNKQTIETIVDLQTHSILSSKFY 573
           FQYVGLD+PDK  +LSW S+ N TT  PPRRAFVITR + QT E IVDL T SI+S + Y
Sbjct: 53  FQYVGLDEPDKSIVLSWLSNPNSTTPPPPRRAFVITRLHSQTHEIIVDLSTQSIISDEVY 112

Query: 572 TGFGYP 555
            G GYP
Sbjct: 113 GGHGYP 118


>ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vinifera]
           gi|297737032|emb|CBI26233.3| unnamed protein product
           [Vitis vinifera]
          Length = 667

 Score =  238 bits (608), Expect(2) = 4e-80
 Identities = 107/161 (66%), Positives = 128/161 (79%)
 Frame = -2

Query: 486 YTGFGYPLFTFEEQIAANQLPLKYAPFIASISKRKLKLEEVACESYSVGWFGGREKDKRE 307
           Y G GYPL T EEQ AA+ LPL Y PFIASI+KR LKL +V C +++VGWFG  +K +R 
Sbjct: 112 YGGHGYPLLTSEEQTAASVLPLTYPPFIASITKRSLKLSDVVCSTFTVGWFG-EDKSRRV 170

Query: 306 LKILCYYLDGSVNLYVRPLEGLTVVVDLDEMKITRYYDRFVVPVPNVEGTEYRASKQKPP 127
           LKI C+Y DG+ NLY+RP+EG+T+VVDLD+MKI  YYDR +VPVP  EGTE R SKQ PP
Sbjct: 171 LKIPCFYTDGTANLYMRPIEGVTIVVDLDDMKIIEYYDRLMVPVPEAEGTECRLSKQNPP 230

Query: 126 FGPSLNGITVVQPDGPGFKIDGHTIRWANWDFHLGFDIRAG 4
           FGP LNG++ + PDGPGFKIDGH +RWANWDFH+ FD RAG
Sbjct: 231 FGPPLNGVSAMPPDGPGFKIDGHNVRWANWDFHISFDARAG 271



 Score = 86.3 bits (212), Expect(2) = 4e-80
 Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = -3

Query: 749 FQYVGLDDPDKQAILSWHSS-NHTTQSPPRRAFVITRTNKQTIETIVDLQTHSILSSKFY 573
           FQYVGLD+PDK  +LSW S+ N TT  PPRRAFVITR + QT E IVDL T SI+S + Y
Sbjct: 53  FQYVGLDEPDKSIVLSWLSNPNSTTPPPPRRAFVITRLHSQTHEIIVDLSTQSIISDEVY 112

Query: 572 TGFGYP 555
            G GYP
Sbjct: 113 GGHGYP 118


>ref|XP_002314703.1| predicted protein [Populus trichocarpa] gi|222863743|gb|EEF00874.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score =  237 bits (605), Expect(2) = 5e-76
 Identities = 106/162 (65%), Positives = 127/162 (78%)
 Frame = -2

Query: 486 YTGFGYPLFTFEEQIAANQLPLKYAPFIASISKRKLKLEEVACESYSVGWFGGREKDKRE 307
           Y G+GYPL TFEEQIAAN LPLKYAPF+ SI KR LK+EEV C  ++VGW+G   + KR 
Sbjct: 114 YDGYGYPLLTFEEQIAANALPLKYAPFLESIRKRGLKIEEVVCGGFTVGWYGEERRKKRI 173

Query: 306 LKILCYYLDGSVNLYVRPLEGLTVVVDLDEMKITRYYDRFVVPVPNVEGTEYRASKQKPP 127
           ++++CYYLDG+VN Y+RP+EG+TV VDL+E KI  + DR  VP+P  +GT+YR SKQ PP
Sbjct: 174 VRVMCYYLDGTVNAYMRPVEGVTVTVDLEETKIIGFKDRLTVPIPKGDGTDYRGSKQNPP 233

Query: 126 FGPSLNGITVVQPDGPGFKIDGHTIRWANWDFHLGFDIRAGP 1
           F   L GIT+VQPDGP F IDGH IRWANWDFHL FD RAGP
Sbjct: 234 FLAQLKGITMVQPDGPSFTIDGHRIRWANWDFHLSFDSRAGP 275



 Score = 73.9 bits (180), Expect(2) = 5e-76
 Identities = 35/65 (53%), Positives = 46/65 (70%)
 Frame = -3

Query: 749 FQYVGLDDPDKQAILSWHSSNHTTQSPPRRAFVITRTNKQTIETIVDLQTHSILSSKFYT 570
           F YVGL+DP+K  +LSW   + TT++PPR+AFVI R N+ T E  VDL  + I+S K Y 
Sbjct: 57  FHYVGLEDPNKLTVLSW-LKDPTTKTPPRQAFVIARINQTTHEITVDLTINKIVSDKLYD 115

Query: 569 GFGYP 555
           G+GYP
Sbjct: 116 GYGYP 120


Top