BLASTX nr result

ID: Cimicifuga21_contig00003270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003270
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_563939.1| glucose-methanol-choline (GMC) oxidoreductase-l...    92   4e-17
ref|NP_172871.1| glucose-methanol-choline oxidoreductase-like pr...    91   7e-17
ref|XP_002522448.1| glucose-methanol-choline (gmc) oxidoreductas...    89   4e-16
ref|XP_003517995.1| PREDICTED: protein HOTHEAD-like [Glycine max]      89   5e-16
ref|XP_002890042.1| glucose-methanol-choline oxidoreductase fami...    89   5e-16

>ref|NP_563939.1| glucose-methanol-choline (GMC) oxidoreductase-like protein
           [Arabidopsis thaliana]
           gi|5080794|gb|AAD39304.1|AC007576_27 Similar to
           mandelonitrile lyase [Arabidopsis thaliana]
           gi|16930499|gb|AAL31935.1|AF419603_1 At1g14180/F7A19_27
           [Arabidopsis thaliana] gi|22137038|gb|AAM91364.1|
           At1g14180/F7A19_27 [Arabidopsis thaliana]
           gi|332190998|gb|AEE29119.1| glucose-methanol-choline
           (GMC) oxidoreductase-like protein [Arabidopsis thaliana]
          Length = 503

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/100 (48%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
 Frame = -1

Query: 309 DPSQVVAITKNSKFLIQLGESRLSDTTQRRSLLAKLSHPRSKGKLELNSTDPRQNPSVKF 130
           DP QVVAIT+  KF++Q      + TT R ++ AK++ P+SKG+L+LN+T+PR+NPSV F
Sbjct: 326 DPPQVVAITEGFKFILQSLVLPTNITTTRTAISAKIAFPKSKGRLKLNNTNPRENPSVTF 385

Query: 129 NYISEENDLDDCVEMLLEMKKVARS--LDEHLGTKYSKKI 16
           NY+  + DLD C EM+L ++ VARS  +   LGT+   K+
Sbjct: 386 NYLENKADLDACQEMVLHLQHVARSKTVTFFLGTQAQDKL 425


>ref|NP_172871.1| glucose-methanol-choline oxidoreductase-like protein [Arabidopsis
           thaliana] gi|5080795|gb|AAD39305.1|AC007576_28 Similar
           to mandelonitrile lyase [Arabidopsis thaliana]
           gi|332190999|gb|AEE29120.1| glucose-methanol-choline
           oxidoreductase-like protein [Arabidopsis thaliana]
          Length = 501

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/100 (47%), Positives = 69/100 (69%), Gaps = 2/100 (2%)
 Frame = -1

Query: 309 DPSQVVAITKNSKFLIQLGESRLSDTTQRRSLLAKLSHPRSKGKLELNSTDPRQNPSVKF 130
           +P QV AI +  KF+++        TT R S+ AK++ P+SKG+L+LNST+PR+NPSVKF
Sbjct: 306 EPPQVAAIAEGYKFILESEVLPTDITTTRISIAAKIAFPKSKGRLKLNSTNPRENPSVKF 365

Query: 129 NYISEENDLDDCVEMLLEMKKVARS--LDEHLGTKYSKKI 16
           NY+  + DLD C+EM+L ++ VARS  +   LGT+   K+
Sbjct: 366 NYLENKADLDACLEMVLHLQHVARSETVTFFLGTQAHDKL 405


>ref|XP_002522448.1| glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus
           communis] gi|223538333|gb|EEF39940.1|
           glucose-methanol-choline (gmc) oxidoreductase, putative
           [Ricinus communis]
          Length = 537

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/85 (51%), Positives = 59/85 (69%)
 Frame = -1

Query: 309 DPSQVVAITKNSKFLIQLGESRLSDTTQRRSLLAKLSHPRSKGKLELNSTDPRQNPSVKF 130
           D  QVV I K+ KF+++ G   +S    R  +  KL+ P SKGKL+L +TDPRQNP VKF
Sbjct: 348 DTPQVVGIAKDFKFIVEGGILPISFNATRMPIAVKLAFPESKGKLKLYNTDPRQNPLVKF 407

Query: 129 NYISEENDLDDCVEMLLEMKKVARS 55
           NY++EE DLD CVEM   +++V+RS
Sbjct: 408 NYLAEEKDLDGCVEMAQLLQRVSRS 432


>ref|XP_003517995.1| PREDICTED: protein HOTHEAD-like [Glycine max]
          Length = 502

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/103 (42%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
 Frame = -1

Query: 360 PCLFFALDVIDVPQPRA-DPSQVVAITKNSKFLIQLGESRLSDTTQRRSLLAKLSHPRSK 184
           PC+   +D    PQ R  DP Q+  IT + K +++     LS  + R ++ AK++ P SK
Sbjct: 296 PCIAVLVD--SKPQNRLPDPPQIAGITDDFKIIVEASIFPLSSNSSRVNVAAKIAMPTSK 353

Query: 183 GKLELNSTDPRQNPSVKFNYISEENDLDDCVEMLLEMKKVARS 55
           G LELN+TDPR NPSV+FNY++ E+D+++CV+M   ++++ARS
Sbjct: 354 GVLELNNTDPRLNPSVRFNYLASEDDMEECVKMTKLLERIARS 396


>ref|XP_002890042.1| glucose-methanol-choline oxidoreductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297335884|gb|EFH66301.1|
           glucose-methanol-choline oxidoreductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 521

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/100 (45%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
 Frame = -1

Query: 309 DPSQVVAITKNSKFLIQLGESRLSDTTQRRSLLAKLSHPRSKGKLELNSTDPRQNPSVKF 130
           +P QV AI +  KF+++        TT R S+ AK++ P+SKG+L+LNST+P +NP+VKF
Sbjct: 326 EPPQVAAIAEGYKFILESAVLPTDITTTRISIAAKIAFPKSKGRLKLNSTNPMENPAVKF 385

Query: 129 NYISEENDLDDCVEMLLEMKKVARS--LDEHLGTKYSKKI 16
           NY+  + DLD C EM+L ++ VARS  +   LGT+   K+
Sbjct: 386 NYLKNKEDLDACQEMVLHLQHVARSECVTFFLGTQAQDKL 425


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