BLASTX nr result

ID: Cimicifuga21_contig00003269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003269
         (1544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528344.1| 3-isopropylmalate dehydratase, putative [Ric...   621   e-178
emb|CBI31237.3| unnamed protein product [Vitis vinifera]              618   e-177
ref|XP_002271046.1| PREDICTED: 3-isopropylmalate dehydratase-lik...   618   e-177
ref|XP_003590190.1| 3-isopropylmalate dehydratase [Medicago trun...   607   e-174
ref|XP_003545044.1| PREDICTED: 3-isopropylmalate dehydratase-lik...   607   e-174

>ref|XP_002528344.1| 3-isopropylmalate dehydratase, putative [Ricinus communis]
            gi|223532212|gb|EEF34016.1| 3-isopropylmalate
            dehydratase, putative [Ricinus communis]
          Length = 510

 Score =  621 bits (1601), Expect(2) = e-178
 Identities = 298/338 (88%), Positives = 321/338 (94%)
 Frame = -1

Query: 1223 CRNASSKKVVAVMAPTQSQRPPSTTGSVKTGMTMTEKILARASERSQLVPGENVWVNIDV 1044
            C+ + SKKVV+VMAP QS+R P+TTGSVKT MTMTEKILARASE+SQL PGENVWVN+DV
Sbjct: 37   CKKSISKKVVSVMAPQQSERTPATTGSVKTAMTMTEKILARASEKSQLSPGENVWVNVDV 96

Query: 1043 LMTHDVCGPGTIGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCTEQ 864
            LMTHDVCGPG+IGIFK+EFG+NA VWDREKIVIIPDHYIFT+DERANRNVDILRDFC EQ
Sbjct: 97   LMTHDVCGPGSIGIFKREFGQNATVWDREKIVIIPDHYIFTTDERANRNVDILRDFCQEQ 156

Query: 863  NIKYFYDIKDLGNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGI 684
            N+KYFYDIKDL NFK NPDYKGVCHVALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGI
Sbjct: 157  NVKYFYDIKDLSNFKVNPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGI 216

Query: 683  GNTDAGFVMGAGKLLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEITVAGATYKSMEFV 504
            GNTDAGFV+G GKLLLKVPPTLRFV+DGEMPDYLLAKDLILQIIGEI+V+GATYKSMEFV
Sbjct: 217  GNTDAGFVLGTGKLLLKVPPTLRFVMDGEMPDYLLAKDLILQIIGEISVSGATYKSMEFV 276

Query: 503  GSAVEKLSMEERMTLCNMVVEAGGKNGVVPADSTTYKYLEGKTSVEFEPVYSDDKARFLS 324
            G+ VE L+MEERMTLCNMVVEAGGKNGV+P+DSTT+KYLE KTSV FEPVYSD+KARFLS
Sbjct: 277  GTTVESLNMEERMTLCNMVVEAGGKNGVIPSDSTTFKYLEDKTSVPFEPVYSDEKARFLS 336

Query: 323  EYRFDVSKLEPLVAKPHSPDNRALARECKDVKIDRVYM 210
            EYRFDVSKLEPLVAKPHSPDN ALARECKDVKIDRVY+
Sbjct: 337  EYRFDVSKLEPLVAKPHSPDNCALARECKDVKIDRVYI 374



 Score = 33.1 bits (74), Expect(2) = e-178
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -2

Query: 214 TCTGGRTEDFHAAAKVSQAS 155
           +CTGG+TEDF AAAKV  AS
Sbjct: 376 SCTGGKTEDFMAAAKVFLAS 395


>emb|CBI31237.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  618 bits (1594), Expect(2) = e-177
 Identities = 296/337 (87%), Positives = 320/337 (94%)
 Frame = -1

Query: 1220 RNASSKKVVAVMAPTQSQRPPSTTGSVKTGMTMTEKILARASERSQLVPGENVWVNIDVL 1041
            +  +S+K+V+VMAP QS R PSTTGSVKT MTMTEKILARAS++ QL PGENVWV++D+L
Sbjct: 36   KRRNSRKIVSVMAPQQSPRSPSTTGSVKTAMTMTEKILARASQKPQLSPGENVWVDVDIL 95

Query: 1040 MTHDVCGPGTIGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCTEQN 861
            MTHDVCGPG+ GIFKKEFG+NAKVWDREKIVIIPDHYIFT+DERANRNVDILRDFCTEQN
Sbjct: 96   MTHDVCGPGSFGIFKKEFGQNAKVWDREKIVIIPDHYIFTNDERANRNVDILRDFCTEQN 155

Query: 860  IKYFYDIKDLGNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIG 681
            IKYFYDIKDLGNFK NPDYKGVCHVALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGIG
Sbjct: 156  IKYFYDIKDLGNFKVNPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIG 215

Query: 680  NTDAGFVMGAGKLLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEITVAGATYKSMEFVG 501
            NTDAGFV+G GK+LLKVPPTLRFV+DGEMPDYLLAKDLILQIIGEI+V+GATYKSMEFVG
Sbjct: 216  NTDAGFVLGTGKILLKVPPTLRFVMDGEMPDYLLAKDLILQIIGEISVSGATYKSMEFVG 275

Query: 500  SAVEKLSMEERMTLCNMVVEAGGKNGVVPADSTTYKYLEGKTSVEFEPVYSDDKARFLSE 321
            S VE L+MEERMTLCNMVVEAGGKNGVVPADSTT+KYLE KT V +EPVYSD++ARFLSE
Sbjct: 276  STVESLTMEERMTLCNMVVEAGGKNGVVPADSTTHKYLEDKTDVPYEPVYSDEQARFLSE 335

Query: 320  YRFDVSKLEPLVAKPHSPDNRALARECKDVKIDRVYM 210
            YRFDVSKLEPLVAKPHSPDNRALARECKDVKIDRVY+
Sbjct: 336  YRFDVSKLEPLVAKPHSPDNRALARECKDVKIDRVYI 372



 Score = 33.5 bits (75), Expect(2) = e-177
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -2

Query: 214 TCTGGRTEDFHAAAKVSQAS 155
           +CTGG+TEDF AAAKV  AS
Sbjct: 374 SCTGGKTEDFLAAAKVFHAS 393


>ref|XP_002271046.1| PREDICTED: 3-isopropylmalate dehydratase-like [Vitis vinifera]
          Length = 508

 Score =  618 bits (1594), Expect(2) = e-177
 Identities = 296/337 (87%), Positives = 320/337 (94%)
 Frame = -1

Query: 1220 RNASSKKVVAVMAPTQSQRPPSTTGSVKTGMTMTEKILARASERSQLVPGENVWVNIDVL 1041
            +  +S+K+V+VMAP QS R PSTTGSVKT MTMTEKILARAS++ QL PGENVWV++D+L
Sbjct: 36   KRRNSRKIVSVMAPQQSPRSPSTTGSVKTAMTMTEKILARASQKPQLSPGENVWVDVDIL 95

Query: 1040 MTHDVCGPGTIGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCTEQN 861
            MTHDVCGPG+ GIFKKEFG+NAKVWDREKIVIIPDHYIFT+DERANRNVDILRDFCTEQN
Sbjct: 96   MTHDVCGPGSFGIFKKEFGQNAKVWDREKIVIIPDHYIFTNDERANRNVDILRDFCTEQN 155

Query: 860  IKYFYDIKDLGNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIG 681
            IKYFYDIKDLGNFK NPDYKGVCHVALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGIG
Sbjct: 156  IKYFYDIKDLGNFKVNPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIG 215

Query: 680  NTDAGFVMGAGKLLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEITVAGATYKSMEFVG 501
            NTDAGFV+G GK+LLKVPPTLRFV+DGEMPDYLLAKDLILQIIGEI+V+GATYKSMEFVG
Sbjct: 216  NTDAGFVLGTGKILLKVPPTLRFVMDGEMPDYLLAKDLILQIIGEISVSGATYKSMEFVG 275

Query: 500  SAVEKLSMEERMTLCNMVVEAGGKNGVVPADSTTYKYLEGKTSVEFEPVYSDDKARFLSE 321
            S VE L+MEERMTLCNMVVEAGGKNGVVPADSTT+KYLE KT V +EPVYSD++ARFLSE
Sbjct: 276  STVESLTMEERMTLCNMVVEAGGKNGVVPADSTTHKYLEDKTDVPYEPVYSDEQARFLSE 335

Query: 320  YRFDVSKLEPLVAKPHSPDNRALARECKDVKIDRVYM 210
            YRFDVSKLEPLVAKPHSPDNRALARECKDVKIDRVY+
Sbjct: 336  YRFDVSKLEPLVAKPHSPDNRALARECKDVKIDRVYI 372



 Score = 33.5 bits (75), Expect(2) = e-177
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -2

Query: 214 TCTGGRTEDFHAAAKVSQAS 155
           +CTGG+TEDF AAAKV  AS
Sbjct: 374 SCTGGKTEDFLAAAKVFHAS 393


>ref|XP_003590190.1| 3-isopropylmalate dehydratase [Medicago truncatula]
            gi|355479238|gb|AES60441.1| 3-isopropylmalate dehydratase
            [Medicago truncatula]
          Length = 505

 Score =  607 bits (1565), Expect(2) = e-174
 Identities = 289/341 (84%), Positives = 319/341 (93%)
 Frame = -1

Query: 1232 QRCCRNASSKKVVAVMAPTQSQRPPSTTGSVKTGMTMTEKILARASERSQLVPGENVWVN 1053
            QRC ++AS +   +V AP Q+QR PS+TGSVKT MTMTEKI+A+ASE+  + PG+N+WV+
Sbjct: 29   QRCHKHASKRITCSVAAPQQTQRQPSSTGSVKTAMTMTEKIMAKASEKGHVTPGDNIWVD 88

Query: 1052 IDVLMTHDVCGPGTIGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 873
            +DVLMTHDVCGPG+IGIFKKEFG++AKVWDREK+VIIPDHYIFTSDERANRNVDILRDFC
Sbjct: 89   VDVLMTHDVCGPGSIGIFKKEFGQDAKVWDREKVVIIPDHYIFTSDERANRNVDILRDFC 148

Query: 872  TEQNIKYFYDIKDLGNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCNAGAFGQFA 693
             EQ+IKYFYDIKDL NFK NPDYKGVCH+ALAQEGHCRPGEVLLGTDSHTC AGAFGQFA
Sbjct: 149  HEQDIKYFYDIKDLSNFKVNPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFA 208

Query: 692  TGIGNTDAGFVMGAGKLLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEITVAGATYKSM 513
            TGIGNTDAGFV+GAGKLLLKVPPTLRFV+DGEMP+YLLAKDLILQIIGEI+VAGATYKSM
Sbjct: 209  TGIGNTDAGFVLGAGKLLLKVPPTLRFVMDGEMPNYLLAKDLILQIIGEISVAGATYKSM 268

Query: 512  EFVGSAVEKLSMEERMTLCNMVVEAGGKNGVVPADSTTYKYLEGKTSVEFEPVYSDDKAR 333
            EFVGS VE L+MEERMTLCNMVVEAGGKNGV+P DS TYKYLEGKTSV +EPVYSD +AR
Sbjct: 269  EFVGSTVESLNMEERMTLCNMVVEAGGKNGVIPPDSITYKYLEGKTSVPYEPVYSDQQAR 328

Query: 332  FLSEYRFDVSKLEPLVAKPHSPDNRALARECKDVKIDRVYM 210
            FLSEYRFDVSKLEPLVAKPHSPDNRALARECKDVKI+RVY+
Sbjct: 329  FLSEYRFDVSKLEPLVAKPHSPDNRALARECKDVKINRVYI 369



 Score = 33.1 bits (74), Expect(2) = e-174
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -2

Query: 214 TCTGGRTEDFHAAAKVSQAS 155
           +CTGG+TEDF AAAKV  AS
Sbjct: 371 SCTGGKTEDFMAAAKVFLAS 390


>ref|XP_003545044.1| PREDICTED: 3-isopropylmalate dehydratase-like [Glycine max]
          Length = 500

 Score =  607 bits (1565), Expect(2) = e-174
 Identities = 295/343 (86%), Positives = 322/343 (93%), Gaps = 2/343 (0%)
 Frame = -1

Query: 1232 QRCCRNASSKKVV--AVMAPTQSQRPPSTTGSVKTGMTMTEKILARASERSQLVPGENVW 1059
            QRC + A  +K++  A+ AP   QR PSTTGSV+T MTMTEKILARASE++QL PG+NVW
Sbjct: 27   QRCFK-AVPRKIIRCAIAAP---QRQPSTTGSVRTAMTMTEKILARASEKAQLTPGDNVW 82

Query: 1058 VNIDVLMTHDVCGPGTIGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRD 879
            VN+D+LMTHDVCGPG+IGIFK+EFGE+AKVWDREK+VIIPDHYIFTSDERANRNVDILRD
Sbjct: 83   VNVDILMTHDVCGPGSIGIFKREFGEDAKVWDREKLVIIPDHYIFTSDERANRNVDILRD 142

Query: 878  FCTEQNIKYFYDIKDLGNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCNAGAFGQ 699
            FC EQNIKYFYDIKDL NFK NPDYKGVCHVALAQEGHCRPGEVLLGTDSHTC AGAFGQ
Sbjct: 143  FCHEQNIKYFYDIKDLSNFKVNPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 202

Query: 698  FATGIGNTDAGFVMGAGKLLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEITVAGATYK 519
            FATGIGNTDAGFV+G GKLLLKVPPTLRFV+DGEMPDYLL+KDLILQIIGEITVAGATYK
Sbjct: 203  FATGIGNTDAGFVLGTGKLLLKVPPTLRFVMDGEMPDYLLSKDLILQIIGEITVAGATYK 262

Query: 518  SMEFVGSAVEKLSMEERMTLCNMVVEAGGKNGVVPADSTTYKYLEGKTSVEFEPVYSDDK 339
            SMEFVG+ VE L+MEERMTLCNMVVEAGGKNGVVPADSTT+KYLEGKTS+ +EPVYSDD+
Sbjct: 263  SMEFVGTTVESLTMEERMTLCNMVVEAGGKNGVVPADSTTFKYLEGKTSLPYEPVYSDDQ 322

Query: 338  ARFLSEYRFDVSKLEPLVAKPHSPDNRALARECKDVKIDRVYM 210
            ARFL+EYRFDVSKLEP+VAKPHSPDNRALARECKDVKIDRVY+
Sbjct: 323  ARFLAEYRFDVSKLEPVVAKPHSPDNRALARECKDVKIDRVYI 365



 Score = 33.1 bits (74), Expect(2) = e-174
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -2

Query: 214 TCTGGRTEDFHAAAKVSQAS 155
           +CTGG+TEDF AAAKV  AS
Sbjct: 367 SCTGGKTEDFMAAAKVFLAS 386


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