BLASTX nr result

ID: Cimicifuga21_contig00003262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003262
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200799.1| histone H2B [Arabidopsis thaliana] gi|27735192|...   164   7e-39
ref|XP_002864658.1| hypothetical protein ARALYDRAFT_496128 [Arab...   164   9e-39
ref|XP_002862747.1| hypothetical protein ARALYDRAFT_333229 [Arab...   164   9e-39
ref|XP_004143093.1| PREDICTED: probable histone H2B.1-like [Cucu...   163   2e-38
ref|XP_003542467.1| PREDICTED: histone H2B.4 [Glycine max]            163   2e-38

>ref|NP_200799.1| histone H2B [Arabidopsis thaliana]
           gi|27735192|sp|P40283.5|H2B11_ARATH RecName:
           Full=Histone H2B.11; AltName: Full=HTB4
           gi|9757912|dbj|BAB08359.1| unnamed protein product
           [Arabidopsis thaliana] gi|16323079|gb|AAL15274.1|
           AT5g59910/mmn10_130 [Arabidopsis thaliana]
           gi|56236124|gb|AAV84518.1| At5g59910 [Arabidopsis
           thaliana] gi|98960893|gb|ABF58930.1| At5g59910
           [Arabidopsis thaliana] gi|332009867|gb|AED97250.1|
           histone H2B [Arabidopsis thaliana]
          Length = 150

 Score =  164 bits (415), Expect = 7e-39
 Identities = 83/88 (94%), Positives = 87/88 (98%)
 Frame = +3

Query: 3   KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKIAQEASKLARYNKKHTLS 182
           KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEK+AQEASKLARYNKK T++
Sbjct: 57  KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTIT 116

Query: 183 SREIQTAIRLVLPGELAKHAVSEGTKAV 266
           SREIQTA+RLVLPGELAKHAVSEGTKAV
Sbjct: 117 SREIQTAVRLVLPGELAKHAVSEGTKAV 144


>ref|XP_002864658.1| hypothetical protein ARALYDRAFT_496128 [Arabidopsis lyrata subsp.
           lyrata] gi|297310493|gb|EFH40917.1| hypothetical protein
           ARALYDRAFT_496128 [Arabidopsis lyrata subsp. lyrata]
          Length = 145

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/88 (93%), Positives = 87/88 (98%)
 Frame = +3

Query: 3   KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKIAQEASKLARYNKKHTLS 182
           KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEK+AQEASKLARYNKK T++
Sbjct: 54  KKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTIT 113

Query: 183 SREIQTAIRLVLPGELAKHAVSEGTKAV 266
           SREIQTA+RLVLPGELAKHAVSEGTKAV
Sbjct: 114 SREIQTAVRLVLPGELAKHAVSEGTKAV 141


>ref|XP_002862747.1| hypothetical protein ARALYDRAFT_333229 [Arabidopsis lyrata subsp.
           lyrata] gi|297308453|gb|EFH39005.1| hypothetical protein
           ARALYDRAFT_333229 [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/88 (93%), Positives = 87/88 (98%)
 Frame = +3

Query: 3   KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKIAQEASKLARYNKKHTLS 182
           KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEK+AQEASKLARYNKK T++
Sbjct: 44  KKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTIT 103

Query: 183 SREIQTAIRLVLPGELAKHAVSEGTKAV 266
           SREIQTA+RLVLPGELAKHAVSEGTKAV
Sbjct: 104 SREIQTAVRLVLPGELAKHAVSEGTKAV 131


>ref|XP_004143093.1| PREDICTED: probable histone H2B.1-like [Cucumis sativus]
           gi|449508145|ref|XP_004163232.1| PREDICTED: probable
           histone H2B.1-like [Cucumis sativus]
          Length = 152

 Score =  163 bits (412), Expect = 2e-38
 Identities = 82/88 (93%), Positives = 87/88 (98%)
 Frame = +3

Query: 3   KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKIAQEASKLARYNKKHTLS 182
           KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEK+AQE+SKLARYNKK T++
Sbjct: 59  KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTIT 118

Query: 183 SREIQTAIRLVLPGELAKHAVSEGTKAV 266
           SREIQTA+RLVLPGELAKHAVSEGTKAV
Sbjct: 119 SREIQTAVRLVLPGELAKHAVSEGTKAV 146


>ref|XP_003542467.1| PREDICTED: histone H2B.4 [Glycine max]
          Length = 139

 Score =  163 bits (412), Expect = 2e-38
 Identities = 82/88 (93%), Positives = 87/88 (98%)
 Frame = +3

Query: 3   KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKIAQEASKLARYNKKHTLS 182
           KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEK+AQEAS+LARYNKK T++
Sbjct: 46  KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTIT 105

Query: 183 SREIQTAIRLVLPGELAKHAVSEGTKAV 266
           SREIQTA+RLVLPGELAKHAVSEGTKAV
Sbjct: 106 SREIQTAVRLVLPGELAKHAVSEGTKAV 133


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