BLASTX nr result

ID: Cimicifuga21_contig00003259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003259
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 iso...   102   1e-39
ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 iso...   102   1e-39
ref|XP_002318160.1| predicted protein [Populus trichocarpa] gi|2...    96   1e-37
dbj|BAG68298.1| serine palmitoyltransferase [Nicotiana benthamiana]    96   1e-37
dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana...    96   1e-37

>ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 isoform 2 [Vitis vinifera]
           gi|297734488|emb|CBI15735.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score =  102 bits (254), Expect(2) = 1e-39
 Identities = 54/73 (73%), Positives = 57/73 (78%)
 Frame = -3

Query: 672 ECLRQNXXXXXXXXXXXPLLLARARICISASHTKEDLIKGLEVISRVGDLVGIKYFPAEP 493
           ECL+QN           PLLLARARICISASHT+EDLIKGLEVISRVGDLV IKYFPAEP
Sbjct: 441 ECLKQNVAVVTVAFPATPLLLARARICISASHTREDLIKGLEVISRVGDLVAIKYFPAEP 500

Query: 492 KKPDQEVGRVKLE 454
           +K   E GRVKLE
Sbjct: 501 RKQQLEEGRVKLE 513



 Score = 87.8 bits (216), Expect(2) = 1e-39
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -1

Query: 860 RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNV 735
           RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL+QNV
Sbjct: 406 RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNV 447


>ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 isoform 1 [Vitis vinifera]
          Length = 489

 Score =  102 bits (254), Expect(2) = 1e-39
 Identities = 54/73 (73%), Positives = 57/73 (78%)
 Frame = -3

Query: 672 ECLRQNXXXXXXXXXXXPLLLARARICISASHTKEDLIKGLEVISRVGDLVGIKYFPAEP 493
           ECL+QN           PLLLARARICISASHT+EDLIKGLEVISRVGDLV IKYFPAEP
Sbjct: 417 ECLKQNVAVVTVAFPATPLLLARARICISASHTREDLIKGLEVISRVGDLVAIKYFPAEP 476

Query: 492 KKPDQEVGRVKLE 454
           +K   E GRVKLE
Sbjct: 477 RKQQLEEGRVKLE 489



 Score = 87.8 bits (216), Expect(2) = 1e-39
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -1

Query: 860 RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNV 735
           RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL+QNV
Sbjct: 382 RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNV 423


>ref|XP_002318160.1| predicted protein [Populus trichocarpa] gi|222858833|gb|EEE96380.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score = 95.9 bits (237), Expect(2) = 1e-37
 Identities = 51/73 (69%), Positives = 55/73 (75%)
 Frame = -3

Query: 672 ECLRQNXXXXXXXXXXXPLLLARARICISASHTKEDLIKGLEVISRVGDLVGIKYFPAEP 493
           ECL+QN           PLLLARARICISASHTKEDL+K LEVIS+VGDLVGIKYFPAE 
Sbjct: 417 ECLKQNVAVVTVAFPATPLLLARARICISASHTKEDLLKALEVISQVGDLVGIKYFPAES 476

Query: 492 KKPDQEVGRVKLE 454
            K  QE G +KLE
Sbjct: 477 DKQHQEPGALKLE 489



 Score = 87.8 bits (216), Expect(2) = 1e-37
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -1

Query: 860 RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNV 735
           RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL+QNV
Sbjct: 382 RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNV 423


>dbj|BAG68298.1| serine palmitoyltransferase [Nicotiana benthamiana]
          Length = 489

 Score = 95.9 bits (237), Expect(2) = 1e-37
 Identities = 51/73 (69%), Positives = 55/73 (75%)
 Frame = -3

Query: 672 ECLRQNXXXXXXXXXXXPLLLARARICISASHTKEDLIKGLEVISRVGDLVGIKYFPAEP 493
           ECL+QN           PLLLARARICISA+H++EDL K LEVISRVGDLVGIKYFPAEP
Sbjct: 417 ECLKQNVAVVIVGFPATPLLLARARICISAAHSREDLNKALEVISRVGDLVGIKYFPAEP 476

Query: 492 KKPDQEVGRVKLE 454
           KK   E  RVKLE
Sbjct: 477 KKQQLEENRVKLE 489



 Score = 87.8 bits (216), Expect(2) = 1e-37
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -1

Query: 860 RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNV 735
           RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL+QNV
Sbjct: 382 RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNV 423


>dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana tabacum]
           gi|159506876|gb|ABW97709.1| serine palmitoyltransferase
           long chain base subunit [Nicotiana benthamiana]
          Length = 489

 Score = 95.9 bits (237), Expect(2) = 1e-37
 Identities = 51/73 (69%), Positives = 55/73 (75%)
 Frame = -3

Query: 672 ECLRQNXXXXXXXXXXXPLLLARARICISASHTKEDLIKGLEVISRVGDLVGIKYFPAEP 493
           ECL+QN           PLLLARARICISA+H++EDL K LEVISRVGDLVGIKYFPAEP
Sbjct: 417 ECLKQNVAVVIVGFPATPLLLARARICISAAHSREDLNKALEVISRVGDLVGIKYFPAEP 476

Query: 492 KKPDQEVGRVKLE 454
           KK   E  RVKLE
Sbjct: 477 KKQQLEENRVKLE 489



 Score = 87.8 bits (216), Expect(2) = 1e-37
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -1

Query: 860 RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNV 735
           RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL+QNV
Sbjct: 382 RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNV 423


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