BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003256
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]   353   4e-95
ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein lig...   352   8e-95
ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein lig...   347   2e-93
ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein lig...   347   2e-93
ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. ...   342   5e-92

>emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  353 bits (905), Expect = 4e-95
 Identities = 160/205 (78%), Positives = 182/205 (88%)
 Frame = +3

Query: 3   GWRHTISVSSSGALYTYGWSKYGQLGHGDFEDHLVPHKLEALRHDYISQISGGWRHTMAV 182
           GWRHTISVSSSG LYTYGWSKYGQLGHGDFEDHL PHKLEAL+ + IS+ISGGWRHTMA+
Sbjct: 221 GWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMAL 280

Query: 183 TSDGRLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHTLAVTERNNVFS 362
           TSDG+LYGWGWNKFGQVG GDN+DHCSPVQVKFP+EQKV  ISCGWRHTLAVTER NVFS
Sbjct: 281 TSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFS 340

Query: 363 WGRGTNGQLGHGNSIDRNFPVIIEALSADGSSCQQIQSSKVESLSGKMWISPAERYAIVP 542
           WGRGTNGQLGHG SIDRN P +IE LSADGS  QQI++SKV+  +G++W+SP+ERYA+VP
Sbjct: 341 WGRGTNGQLGHGESIDRNIPKMIEVLSADGSGGQQIETSKVDPSTGRIWVSPSERYAVVP 400

Query: 543 NETVKGQTFRSDVSVPENDIKRIRI 617
           +ET  G    +D SVPE+D+KRIR+
Sbjct: 401 DETGNG----NDASVPESDVKRIRL 421



 Score =  127 bits (319), Expect = 3e-27
 Identities = 58/146 (39%), Positives = 89/146 (60%)
 Frame = +3

Query: 3   GWRHTISVSSSGALYTYGWSKYGQLGHGDFEDHLVPHKLEALRHDYISQISGGWRHTMAV 182
           G  H ++V+  G + ++G ++ GQLG G  ED LVP K++A +   +  ++ G  HT AV
Sbjct: 117 GDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAV 176

Query: 183 TSDGRLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHTLAVTERNNVFS 362
           T DG LYGWGW ++G +G GD  D   P +V      K+ +++CGWRHT++V+    +++
Sbjct: 177 TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYT 236

Query: 363 WGRGTNGQLGHGNSIDRNFPVIIEAL 440
           +G    GQLGHG+  D   P  +EAL
Sbjct: 237 YGWSKYGQLGHGDFEDHLTPHKLEAL 262


>ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera] gi|296082603|emb|CBI21608.3| unnamed protein
           product [Vitis vinifera]
          Length = 445

 Score =  352 bits (902), Expect = 8e-95
 Identities = 162/211 (76%), Positives = 183/211 (86%), Gaps = 6/211 (2%)
 Frame = +3

Query: 3   GWRHTISVSSSGALYTYGWSKYGQLGHGDFEDHLVPHKLEALRHDYISQISGGWRHTMAV 182
           GWRHTISVSSSG LYTYGWSKYGQLGHGDFEDHL PHKLEAL+ + IS+ISGGWRHTMA+
Sbjct: 233 GWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMAL 292

Query: 183 TSDGRLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHTLAVTERNNVFS 362
           TSDG+LYGWGWNKFGQVG GDN+DHCSPVQVKFP+EQKV  ISCGWRHTLAVTER NVFS
Sbjct: 293 TSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFS 352

Query: 363 WGRGTNGQLGHGNSIDRNFPVIIEALSADGSSCQQIQSSKVESLSGKMWISPAERYAIVP 542
           WGRGTNGQLGHG SIDRN P +IE LSADGS  QQI++SKV+  +G++W+SP+ERYA+VP
Sbjct: 353 WGRGTNGQLGHGESIDRNIPKMIEVLSADGSGGQQIETSKVDPSTGRIWVSPSERYAVVP 412

Query: 543 NETVKGQTFRS------DVSVPENDIKRIRI 617
           +ET   QT  S      D SVPE+D+KRIR+
Sbjct: 413 DETGSTQTGVSVKGNGNDASVPESDVKRIRL 443



 Score =  127 bits (319), Expect = 3e-27
 Identities = 58/146 (39%), Positives = 89/146 (60%)
 Frame = +3

Query: 3   GWRHTISVSSSGALYTYGWSKYGQLGHGDFEDHLVPHKLEALRHDYISQISGGWRHTMAV 182
           G  H ++V+  G + ++G ++ GQLG G  ED LVP K++A +   +  ++ G  HT AV
Sbjct: 129 GDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAV 188

Query: 183 TSDGRLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHTLAVTERNNVFS 362
           T DG LYGWGW ++G +G GD  D   P +V      K+ +++CGWRHT++V+    +++
Sbjct: 189 TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYT 248

Query: 363 WGRGTNGQLGHGNSIDRNFPVIIEAL 440
           +G    GQLGHG+  D   P  +EAL
Sbjct: 249 YGWSKYGQLGHGDFEDHLTPHKLEAL 274



 Score =  106 bits (264), Expect = 8e-21
 Identities = 58/146 (39%), Positives = 84/146 (57%), Gaps = 1/146 (0%)
 Frame = +3

Query: 3   GWRHTISVSSSGALYTYGWSKYGQLGHGDFEDHLVPHKLEALRHDYISQISGGWRHTMAV 182
           G  H++++ S   + ++G  + GQLGHGD ED L P  L AL    +  ++ G  HT A 
Sbjct: 24  GASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAY 83

Query: 183 T-SDGRLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHTLAVTERNNVF 359
           + S  ++Y WGW  FG++G G++ D  +P  +K  +  ++ QI+CG  H LAVT    V 
Sbjct: 84  SESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQ 143

Query: 360 SWGRGTNGQLGHGNSIDRNFPVIIEA 437
           SWGR  NGQLG G + D   P  I+A
Sbjct: 144 SWGRNQNGQLGLGTTEDSLVPQKIQA 169



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
 Frame = +3

Query: 150 ISGGWRHTMAVTSDGRLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHT 329
           IS G  H++A+ S   +  WG  + GQ+G GD  D  SP  +   +  +V  ++CG  HT
Sbjct: 21  ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHT 80

Query: 330 LAVTER-NNVFSWGRGTNGQLGHGNSIDRNFPVIIEAL 440
            A +E    V+SWG G  G+LGHGNS D   P  I+AL
Sbjct: 81  TAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKAL 118


>ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  347 bits (890), Expect = 2e-93
 Identities = 159/214 (74%), Positives = 182/214 (85%), Gaps = 9/214 (4%)
 Frame = +3

Query: 3   GWRHTISVSSSGALYTYGWSKYGQLGHGDFEDHLVPHKLEALRHDYISQISGGWRHTMAV 182
           GWRHTISVSS G LYTYGWSKYGQLGHGDFED LVPH+LEALR D ISQISGGWRHTMA+
Sbjct: 89  GWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMAL 148

Query: 183 TSDGRLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHTLAVTERNNVFS 362
           T+DG+LYGWGWNKFGQVGAGDNIDHCSP+Q+KFP +QKV QISCGWRHTLAVT++ NVFS
Sbjct: 149 TTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFS 208

Query: 363 WGRGTNGQLGHGNSIDRNFPVIIEALSADGSSCQQIQSSKVESLSGKMWISPAERYAIVP 542
           WGRGTNGQLGHG S+DRN P+I+EALS DG S QQI+SS ++  SGK W+SP ERYAIVP
Sbjct: 209 WGRGTNGQLGHGESVDRNTPMILEALSVDGCSGQQIESSNIDPSSGKTWVSPTERYAIVP 268

Query: 543 NETVKGQT---------FRSDVSVPENDIKRIRI 617
           +E+V+ Q            SD +VPEND+KR+R+
Sbjct: 269 DESVQVQVQGPSTSVRGNGSDANVPENDVKRLRV 302



 Score =  123 bits (308), Expect = 6e-26
 Identities = 57/136 (41%), Positives = 82/136 (60%)
 Frame = +3

Query: 51  YGWSKYGQLGHGDFEDHLVPHKLEALRHDYISQISGGWRHTMAVTSDGRLYGWGWNKFGQ 230
           +G ++ GQLG G  ED LVP K++A     I  ++ G  HT AVT DG L+GWGW ++G 
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60

Query: 231 VGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHTLAVTERNNVFSWGRGTNGQLGHGNSID 410
           +G GD  D   P +V   +  K+  ++CGWRHT++V+    ++++G    GQLGHG+  D
Sbjct: 61  LGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFED 120

Query: 411 RNFPVIIEALSADGSS 458
           R  P  +EAL  D  S
Sbjct: 121 RLVPHRLEALRGDNIS 136


>ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  347 bits (890), Expect = 2e-93
 Identities = 159/214 (74%), Positives = 182/214 (85%), Gaps = 9/214 (4%)
 Frame = +3

Query: 3   GWRHTISVSSSGALYTYGWSKYGQLGHGDFEDHLVPHKLEALRHDYISQISGGWRHTMAV 182
           GWRHTISVSS G LYTYGWSKYGQLGHGDFED LVPH+LEALR D ISQISGGWRHTMA+
Sbjct: 225 GWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMAL 284

Query: 183 TSDGRLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHTLAVTERNNVFS 362
           T+DG+LYGWGWNKFGQVGAGDNIDHCSP+Q+KFP +QKV QISCGWRHTLAVT++ NVFS
Sbjct: 285 TTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFS 344

Query: 363 WGRGTNGQLGHGNSIDRNFPVIIEALSADGSSCQQIQSSKVESLSGKMWISPAERYAIVP 542
           WGRGTNGQLGHG S+DRN P+I+EALS DG S QQI+SS ++  SGK W+SP ERYAIVP
Sbjct: 345 WGRGTNGQLGHGESVDRNTPMILEALSVDGCSGQQIESSNIDPSSGKTWVSPTERYAIVP 404

Query: 543 NETVKGQT---------FRSDVSVPENDIKRIRI 617
           +E+V+ Q            SD +VPEND+KR+R+
Sbjct: 405 DESVQVQVQGPSTSVRGNGSDANVPENDVKRLRV 438



 Score =  131 bits (329), Expect = 2e-28
 Identities = 61/152 (40%), Positives = 91/152 (59%)
 Frame = +3

Query: 3   GWRHTISVSSSGALYTYGWSKYGQLGHGDFEDHLVPHKLEALRHDYISQISGGWRHTMAV 182
           G  H ++V+  G + ++G ++ GQLG G  ED LVP K++A     I  ++ G  HT AV
Sbjct: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180

Query: 183 TSDGRLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHTLAVTERNNVFS 362
           T DG L+GWGW ++G +G GD  D   P +V   +  K+  ++CGWRHT++V+    +++
Sbjct: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240

Query: 363 WGRGTNGQLGHGNSIDRNFPVIIEALSADGSS 458
           +G    GQLGHG+  DR  P  +EAL  D  S
Sbjct: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNIS 272



 Score =  108 bits (271), Expect = 1e-21
 Identities = 67/183 (36%), Positives = 95/183 (51%), Gaps = 1/183 (0%)
 Frame = +3

Query: 3   GWRHTISVSSSGALYTYGWSKYGQLGHGDFEDHLVPHKLEALRHDYISQISGGWRHTMAV 182
           G  H++++ S   + ++G  + GQLGHGD ED L P +L AL    I  ++ G  HT A 
Sbjct: 16  GASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAY 75

Query: 183 T-SDGRLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHTLAVTERNNVF 359
           + +   +Y WGW  FG++G G++ D  +P  +K  +  K+ QI+CG  H LAVT    V 
Sbjct: 76  SVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQ 135

Query: 360 SWGRGTNGQLGHGNSIDRNFPVIIEALSADGSSCQQIQSSKVESLSGKMWISPAERYAIV 539
           SWGR  NGQLG G + D   P  I+A                E +S KM  + AE  A V
Sbjct: 136 SWGRNQNGQLGLGTTEDSLVPQKIQAF---------------EGISIKMVAAGAEHTAAV 180

Query: 540 PNE 548
             +
Sbjct: 181 TED 183



 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
 Frame = +3

Query: 150 ISGGWRHTMAVTSDGRLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHT 329
           IS G  H++A+ S   +  WG  + GQ+G GD  D  SP Q+   +  ++  ++CG  HT
Sbjct: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 72

Query: 330 LAVT-ERNNVFSWGRGTNGQLGHGNSIDRNFPVIIEAL 440
            A +  R  V+SWG G  G+LGHGNS D   P  I+AL
Sbjct: 73  TAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKAL 110


>ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
           gi|297312414|gb|EFH42838.1| UVB-resistance 8
           [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  342 bits (878), Expect = 5e-92
 Identities = 158/211 (74%), Positives = 182/211 (86%), Gaps = 6/211 (2%)
 Frame = +3

Query: 3   GWRHTISVSSSGALYTYGWSKYGQLGHGDFEDHLVPHKLEALRHDYISQISGGWRHTMAV 182
           GWRHTISVS SGALYTYGWSKYGQLGHGD EDHL+PHKLEAL + +ISQISGGWRHTMA+
Sbjct: 232 GWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL 291

Query: 183 TSDGRLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHTLAVTERNNVFS 362
           TSDG+LYGWGWNKFGQVG G+N+D CSPVQV+FP++QKV Q+SCGWRHTLAVTERNNVF+
Sbjct: 292 TSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFA 351

Query: 363 WGRGTNGQLGHGNSIDRNFPVIIEALSADGSSCQQIQSSKVESLSGKMWISPAERYAIVP 542
           WGRGTNGQLG G S+DRNFP IIEALS DG+S Q I+SS ++  SGK W+SPAERYA+VP
Sbjct: 352 WGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQHIESSNIDPSSGKSWVSPAERYAVVP 411

Query: 543 NETVKGQTFRS------DVSVPENDIKRIRI 617
           +ET  G T  S      D+SVP+ D+KR+RI
Sbjct: 412 DET--GLTDGSNKGNGGDISVPQTDVKRVRI 440



 Score =  131 bits (330), Expect = 2e-28
 Identities = 61/147 (41%), Positives = 91/147 (61%)
 Frame = +3

Query: 3   GWRHTISVSSSGALYTYGWSKYGQLGHGDFEDHLVPHKLEALRHDYISQISGGWRHTMAV 182
           G  H ++V+  G + ++G ++ GQLG GD ED LVP K++A     I  ++ G  HT AV
Sbjct: 128 GDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV 187

Query: 183 TSDGRLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHTLAVTERNNVFS 362
           T DG LYGWGW ++G +G GD  D   P +V     +K++ ++CGWRHT++V+    +++
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 363 WGRGTNGQLGHGNSIDRNFPVIIEALS 443
           +G    GQLGHG+  D   P  +EALS
Sbjct: 248 YGWSKYGQLGHGDLEDHLIPHKLEALS 274



 Score =  109 bits (273), Expect = 7e-22
 Identities = 58/146 (39%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
 Frame = +3

Query: 3   GWRHTISVSSSGALYTYGWSKYGQLGHGDFEDHLVPHKLEALRHDYISQISGGWRHTMAV 182
           G  H++++ S   + ++G  + GQLGHGD ED   P +L AL    I  ++ G  HT+A 
Sbjct: 23  GASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAY 82

Query: 183 TSDG-RLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHTLAVTERNNVF 359
           +  G  +Y WGW  FG++G G++ D  +P+ +K  +  ++ QI+CG  H LAVT    V 
Sbjct: 83  SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQ 142

Query: 360 SWGRGTNGQLGHGNSIDRNFPVIIEA 437
           SWGR  NGQLG G++ D   P  I+A
Sbjct: 143 SWGRNQNGQLGLGDTEDSLVPQKIQA 168



 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
 Frame = +3

Query: 150 ISGGWRHTMAVTSDGRLYGWGWNKFGQVGAGDNIDHCSPVQVKFPNEQKVAQISCGWRHT 329
           IS G  H++A+ S   +  WG  + GQ+G GD  D  SP Q+   +  ++  ++CG  HT
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79

Query: 330 LAVTERN-NVFSWGRGTNGQLGHGNSIDRNFPVIIEAL 440
           +A ++    V+SWG G  G+LGHGNS D   P+ I+AL
Sbjct: 80  VAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKAL 117