BLASTX nr result
ID: Cimicifuga21_contig00003250
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00003250
(1817 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communi... 518 0.0
ref|XP_003546456.1| PREDICTED: WD-40 repeat-containing protein M... 511 0.0
ref|XP_003533752.1| PREDICTED: WD-40 repeat-containing protein M... 511 0.0
gb|AAX47182.1| FVE [Pisum sativum] 514 0.0
ref|XP_004158447.1| PREDICTED: WD-40 repeat-containing protein M... 510 0.0
>ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communis]
gi|223546569|gb|EEF48067.1| WD-repeat protein, putative
[Ricinus communis]
Length = 503
Score = 518 bits (1334), Expect(3) = 0.0
Identities = 251/314 (79%), Positives = 269/314 (85%), Gaps = 6/314 (1%)
Frame = +1
Query: 241 AAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVESQP 420
AAEHI+QFNEEARSPFVKK+KTIIHPGEVNRIRELPQNS+IVATHTD PDVLIWDVE+QP
Sbjct: 125 AAEHIAQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIVATHTDGPDVLIWDVEAQP 184
Query: 421 NRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIHDHISASAT 600
NRHAVLGA +SRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSI DHI+ASAT
Sbjct: 185 NRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITASAT 244
Query: 601 DXXXXXXXXXXXXXXXXXXXXXXXXX------PRGIYQGHDDTVEDVQFCPSSAQEFCSV 762
D PRGIYQGH+DTVEDV FCPSSAQEFCSV
Sbjct: 245 DPATAKSPGSGGSIIKRAGEGNDRAAESPSVGPRGIYQGHEDTVEDVTFCPSSAQEFCSV 304
Query: 763 GDDSCLILWDARAGTSPAVKVEKAHNADLHCVDWNPNDENLILTGSADNSVRMFDRRNLT 942
GDDSCLILWDAR G+SPAVKVEKAHNADLHCVDWNP+D NLI+TGSADNSVRMFDRRNLT
Sbjct: 305 GDDSCLILWDARIGSSPAVKVEKAHNADLHCVDWNPHDNNLIITGSADNSVRMFDRRNLT 364
Query: 943 SGGVGAPIYKFEGHKAAVLCVQWSPDKSTVFGSAAEDGLLNVWDHEKIGKKKDRVGTRMP 1122
S GVG P+YKFEGHKAAVLCVQWSPDKS+VFGS+AEDGLLN+WD++K+GKK +R TR P
Sbjct: 365 SNGVGTPVYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVGKKTER-ATRAP 423
Query: 1123 NSPPGLFFQHGGHR 1164
NSP GLFFQH GHR
Sbjct: 424 NSPAGLFFQHAGHR 437
Score = 120 bits (302), Expect(3) = 0.0
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = +2
Query: 2 NHNLVWPSLSCRWGPQLEKATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA 172
NHNLVWPSLSCRWGPQLE+ATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA
Sbjct: 70 NHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA 126
Score = 80.9 bits (198), Expect(3) = 0.0
Identities = 35/43 (81%), Positives = 42/43 (97%)
Frame = +3
Query: 1272 ESTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKSHILTCSSKS 1400
++TGGGGTLQIWRMSDLIYRPE+EVLAELEKFKSH++ C+SK+
Sbjct: 461 DTTGGGGTLQIWRMSDLIYRPEDEVLAELEKFKSHVIECTSKA 503
>ref|XP_003546456.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max]
Length = 508
Score = 511 bits (1317), Expect(3) = 0.0
Identities = 247/311 (79%), Positives = 270/311 (86%), Gaps = 3/311 (0%)
Frame = +1
Query: 241 AAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVESQP 420
AAEHISQFNEEARSPFVKK+KTIIHPGEVNRIRELPQNSKIVATHTDSPDVL+WDVESQP
Sbjct: 131 AAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLVWDVESQP 190
Query: 421 NRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIHDHISASAT 600
NRHAVLGA +SRPDLILTGHQDNAEFALAMCPTEP+VLSGGKDK+VVLWSI DHI+++AT
Sbjct: 191 NRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKTVVLWSIEDHITSAAT 250
Query: 601 DXXXXXXXXXXXXXXXXXXXXXXXXX---PRGIYQGHDDTVEDVQFCPSSAQEFCSVGDD 771
D PRGIY GH+DTVEDV FCPSSAQEFCSVGDD
Sbjct: 251 DSKSGGSIIKQNSKSGEGNDKTADGPTVGPRGIYCGHEDTVEDVTFCPSSAQEFCSVGDD 310
Query: 772 SCLILWDARAGTSPAVKVEKAHNADLHCVDWNPNDENLILTGSADNSVRMFDRRNLTSGG 951
SCLILWDAR G+SP VKVEKAHNADLHCVDWNP+D+NLILTGSADNSVRMFDRRNLT+ G
Sbjct: 311 SCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLTTNG 370
Query: 952 VGAPIYKFEGHKAAVLCVQWSPDKSTVFGSAAEDGLLNVWDHEKIGKKKDRVGTRMPNSP 1131
VG+PI+KFEGHKAAVLCVQWSPDKS+VFGS+AEDGLLN+WD+EK+GKK +R G + +SP
Sbjct: 371 VGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERTGKSI-SSP 429
Query: 1132 PGLFFQHGGHR 1164
PGLFFQH GHR
Sbjct: 430 PGLFFQHAGHR 440
Score = 120 bits (302), Expect(3) = 0.0
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = +2
Query: 2 NHNLVWPSLSCRWGPQLEKATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA 172
NHNLVWPSLSCRWGPQLE+ATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA
Sbjct: 76 NHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA 132
Score = 83.2 bits (204), Expect(3) = 0.0
Identities = 37/43 (86%), Positives = 42/43 (97%)
Frame = +3
Query: 1272 ESTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKSHILTCSSKS 1400
ESTGGGGTLQIWRMSDLIYRPE+EVLAELEKFKSH++ C+SK+
Sbjct: 464 ESTGGGGTLQIWRMSDLIYRPEDEVLAELEKFKSHVVACASKT 506
>ref|XP_003533752.1| PREDICTED: WD-40 repeat-containing protein MSI4-like isoform 1
[Glycine max]
Length = 513
Score = 511 bits (1315), Expect(3) = 0.0
Identities = 247/311 (79%), Positives = 270/311 (86%), Gaps = 3/311 (0%)
Frame = +1
Query: 241 AAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVESQP 420
AAEHISQFNEEARSPFVKK+KTIIHPGEVNRIRELPQNSKIVATHTDSPDVL+WDVESQP
Sbjct: 136 AAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLVWDVESQP 195
Query: 421 NRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIHDHISASAT 600
NRHAVLGA +SRPDLILTGHQDNAEFALAMCPTEP+VLSGGKDK+VVLWSI DHI+++AT
Sbjct: 196 NRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKTVVLWSIEDHITSAAT 255
Query: 601 DXXXXXXXXXXXXXXXXXXXXXXXXX---PRGIYQGHDDTVEDVQFCPSSAQEFCSVGDD 771
D PRGIY GH+DTVEDV FCPSSAQEFCSVGDD
Sbjct: 256 DSKSGGSIIKQNSKSGEGNDKTADGPTVGPRGIYCGHEDTVEDVAFCPSSAQEFCSVGDD 315
Query: 772 SCLILWDARAGTSPAVKVEKAHNADLHCVDWNPNDENLILTGSADNSVRMFDRRNLTSGG 951
SCLILWDAR G+SP VKVEKAHNADLHCVDWNP+D+NLILTGSADNSVRMFDRRNLT+ G
Sbjct: 316 SCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLTTNG 375
Query: 952 VGAPIYKFEGHKAAVLCVQWSPDKSTVFGSAAEDGLLNVWDHEKIGKKKDRVGTRMPNSP 1131
VG+PI+KFEGHKAAVLCVQWSPDKS+VFGS+AEDGLLN+WD+EK+GKK +R G + +SP
Sbjct: 376 VGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERSGKSI-SSP 434
Query: 1132 PGLFFQHGGHR 1164
PGLFFQH GHR
Sbjct: 435 PGLFFQHAGHR 445
Score = 120 bits (302), Expect(3) = 0.0
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = +2
Query: 2 NHNLVWPSLSCRWGPQLEKATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA 172
NHNLVWPSLSCRWGPQLE+ATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA
Sbjct: 81 NHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA 137
Score = 83.2 bits (204), Expect(3) = 0.0
Identities = 37/43 (86%), Positives = 42/43 (97%)
Frame = +3
Query: 1272 ESTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKSHILTCSSKS 1400
ESTGGGGTLQIWRMSDLIYRPE+EVLAELEKFKSH++ C+SK+
Sbjct: 469 ESTGGGGTLQIWRMSDLIYRPEDEVLAELEKFKSHVVACASKT 511
>gb|AAX47182.1| FVE [Pisum sativum]
Length = 515
Score = 514 bits (1324), Expect(3) = 0.0
Identities = 248/310 (80%), Positives = 269/310 (86%), Gaps = 2/310 (0%)
Frame = +1
Query: 241 AAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVESQP 420
AAEHISQFNEEARSPFVKK+KTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVESQP
Sbjct: 139 AAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVESQP 198
Query: 421 NRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIHDHISASAT 600
NRHAVLGA +SRPDLILTGHQDNAEFALAMCPTEP+VLSGGKDK+VVLWSI DH++++AT
Sbjct: 199 NRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKTVVLWSIEDHVTSAAT 258
Query: 601 DXXXXXXXXXXXXXXXXXXXXXXXXX--PRGIYQGHDDTVEDVQFCPSSAQEFCSVGDDS 774
D PRGIY GHDDTVEDV FCPSSAQEFCSVGDDS
Sbjct: 259 DKSGGSIIKPNSKSGEGNDKTVDSPSVGPRGIYSGHDDTVEDVAFCPSSAQEFCSVGDDS 318
Query: 775 CLILWDARAGTSPAVKVEKAHNADLHCVDWNPNDENLILTGSADNSVRMFDRRNLTSGGV 954
CLILWDAR G+SP VKVEKAHNADLHCVDWNP+D+NLILTGSADNSVR+FDRRNLTS GV
Sbjct: 319 CLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRLFDRRNLTSNGV 378
Query: 955 GAPIYKFEGHKAAVLCVQWSPDKSTVFGSAAEDGLLNVWDHEKIGKKKDRVGTRMPNSPP 1134
G+PI+KFE HKAAVLCVQWSPDKS+VFGS+AEDGLLN+WD+EK+GKK +R G + NSPP
Sbjct: 379 GSPIHKFEAHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERAGKTI-NSPP 437
Query: 1135 GLFFQHGGHR 1164
GLFFQH GHR
Sbjct: 438 GLFFQHAGHR 447
Score = 117 bits (294), Expect(3) = 0.0
Identities = 55/57 (96%), Positives = 56/57 (98%)
Frame = +2
Query: 2 NHNLVWPSLSCRWGPQLEKATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA 172
NHNLVWPSLSCRWGPQLE+ATYKNRQRLYLSEQTDGSVPNTLVIANCEVVK RVAAA
Sbjct: 84 NHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKTRVAAA 140
Score = 81.6 bits (200), Expect(3) = 0.0
Identities = 36/45 (80%), Positives = 43/45 (95%)
Frame = +3
Query: 1272 ESTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKSHILTCSSKS*T 1406
ESTGGGGTLQIWRMSDL+YRPE+EVLAELEKFKSH++ C++K+ T
Sbjct: 471 ESTGGGGTLQIWRMSDLLYRPEDEVLAELEKFKSHVVACAAKTDT 515
>ref|XP_004158447.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Cucumis
sativus]
Length = 518
Score = 510 bits (1313), Expect(3) = 0.0
Identities = 244/314 (77%), Positives = 269/314 (85%), Gaps = 6/314 (1%)
Frame = +1
Query: 241 AAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVESQP 420
AAEHISQFNEEARSPFVKK+KTIIHPGEVNRIRELPQNS+IVATHTDSPDVLIWDVE+QP
Sbjct: 140 AAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIVATHTDSPDVLIWDVEAQP 199
Query: 421 NRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIHDHISASAT 600
NRHAVLGA +SRPDLILTGHQ+NAEFALAMCPTEP+VLSGGKDK VVLWSI DHI+ SAT
Sbjct: 200 NRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLWSIQDHITTSAT 259
Query: 601 DXXXXXXXXXXXXXXXXXXXXXXXXX------PRGIYQGHDDTVEDVQFCPSSAQEFCSV 762
D PRG+Y GH+DTVEDV FCPS+AQEFCSV
Sbjct: 260 DAGASKSPGSGGSIIKKPGEANDKASDGPSIGPRGVYHGHEDTVEDVTFCPSNAQEFCSV 319
Query: 763 GDDSCLILWDARAGTSPAVKVEKAHNADLHCVDWNPNDENLILTGSADNSVRMFDRRNLT 942
GDDSCLILWDAR G+SPAVKVEKAHNADLHCVDWNP+D+NLI+TGSADNS+R+FDRRNLT
Sbjct: 320 GDDSCLILWDARTGSSPAVKVEKAHNADLHCVDWNPHDDNLIITGSADNSIRLFDRRNLT 379
Query: 943 SGGVGAPIYKFEGHKAAVLCVQWSPDKSTVFGSAAEDGLLNVWDHEKIGKKKDRVGTRMP 1122
S GVG+PIYKFEGHKAAVLCVQWSPDKS+VFGS+AEDGLLN+WD++K+GKK +R TR P
Sbjct: 380 SNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVGKKTER-ATRTP 438
Query: 1123 NSPPGLFFQHGGHR 1164
+PPGLFFQH GHR
Sbjct: 439 AAPPGLFFQHAGHR 452
Score = 120 bits (302), Expect(3) = 0.0
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = +2
Query: 2 NHNLVWPSLSCRWGPQLEKATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA 172
NHNLVWPSLSCRWGPQLE+ATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA
Sbjct: 85 NHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA 141
Score = 80.5 bits (197), Expect(3) = 0.0
Identities = 35/42 (83%), Positives = 41/42 (97%)
Frame = +3
Query: 1272 ESTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKSHILTCSSK 1397
++TGGGGTLQIWRMSDLIYRPEEEVLAELEKFKSH++ C++K
Sbjct: 476 DTTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKSHVIECAAK 517