BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003236
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU19393.1| unknown [Glycine max]                                  105   6e-33
ref|NP_001239621.1| uncharacterized protein LOC100808705 [Glycin...   105   6e-33
gb|ABK23152.1| unknown [Picea sitchensis] gi|116792247|gb|ABK262...   107   6e-33
ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [...   107   1e-32
ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis...   107   1e-32

>gb|ACU19393.1| unknown [Glycine max]
          Length = 236

 Score =  105 bits (263), Expect(2) = 6e-33
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -3

Query: 617 SMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKVMLDWDPKGKQGP 462
           SMKFKDGYMISSGQPV +YIDSAVRHVLLRQGVLGIKVK+MLDWDPKGKQGP
Sbjct: 149 SMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP 200



 Score = 60.8 bits (146), Expect(2) = 6e-33
 Identities = 28/40 (70%), Positives = 34/40 (85%), Gaps = 2/40 (5%)
 Frame = -2

Query: 408 PKGKQGPTTPLPDLVTIHTPKDEDDFIRLPVV--NEIEVI 295
           PKGKQGP TPLPDLVTIHTPK+E+++ R P V  N+IEV+
Sbjct: 194 PKGKQGPKTPLPDLVTIHTPKEEEEYNRPPAVLANDIEVV 233


>ref|NP_001239621.1| uncharacterized protein LOC100808705 [Glycine max]
           gi|255641130|gb|ACU20843.1| unknown [Glycine max]
          Length = 236

 Score =  105 bits (263), Expect(2) = 6e-33
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -3

Query: 617 SMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKVMLDWDPKGKQGP 462
           SMKFKDGYMISSGQPV +YIDSAVRHVLLRQGVLGIKVK+MLDWDPKGKQGP
Sbjct: 149 SMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP 200



 Score = 60.8 bits (146), Expect(2) = 6e-33
 Identities = 28/40 (70%), Positives = 34/40 (85%), Gaps = 2/40 (5%)
 Frame = -2

Query: 408 PKGKQGPTTPLPDLVTIHTPKDEDDFIRLPVV--NEIEVI 295
           PKGKQGP TPLPDLVTIHTPK+E+++ R P V  N+IEV+
Sbjct: 194 PKGKQGPKTPLPDLVTIHTPKEEEEYNRPPAVLANDIEVV 233


>gb|ABK23152.1| unknown [Picea sitchensis] gi|116792247|gb|ABK26290.1| unknown
           [Picea sitchensis]
          Length = 233

 Score =  107 bits (267), Expect(2) = 6e-33
 Identities = 50/52 (96%), Positives = 51/52 (98%)
 Frame = -3

Query: 617 SMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKVMLDWDPKGKQGP 462
           SMKFKDGYMISSGQPVNEYID AVRHVLLRQGVLGIKVK+MLDWDPKGKQGP
Sbjct: 149 SMKFKDGYMISSGQPVNEYIDRAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP 200



 Score = 59.3 bits (142), Expect(2) = 6e-33
 Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
 Frame = -2

Query: 408 PKGKQGPTTPLPDLVTIHTPKDEDDFIRLPVV-NEIEVI 295
           PKGKQGPT PLPD VTI+TPKDE+DF   P V NE+E++
Sbjct: 194 PKGKQGPTKPLPDFVTIYTPKDEEDFSSKPSVGNEVEIL 232


>ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
           gi|449521735|ref|XP_004167885.1| PREDICTED: 40S
           ribosomal protein S3-3-like [Cucumis sativus]
          Length = 236

 Score =  107 bits (266), Expect(2) = 1e-32
 Identities = 50/52 (96%), Positives = 51/52 (98%)
 Frame = -3

Query: 617 SMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKVMLDWDPKGKQGP 462
           SMKFKDGYMISSGQPV EYIDSAVRHVLLRQGVLGIKVK+MLDWDPKGKQGP
Sbjct: 149 SMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP 200



 Score = 58.5 bits (140), Expect(2) = 1e-32
 Identities = 29/40 (72%), Positives = 32/40 (80%), Gaps = 3/40 (7%)
 Frame = -2

Query: 408 PKGKQGPTTPLPDLVTIHTPKDEDDFIRLPVV---NEIEV 298
           PKGKQGP TPLPDLVTIH+PK+E+DFIR   V    EIEV
Sbjct: 194 PKGKQGPPTPLPDLVTIHSPKEEEDFIRPVAVIPTTEIEV 233


>ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
           gi|297743020|emb|CBI35887.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  107 bits (266), Expect(2) = 1e-32
 Identities = 50/52 (96%), Positives = 51/52 (98%)
 Frame = -3

Query: 617 SMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKVMLDWDPKGKQGP 462
           SMKFKDGYMISSGQPV EYIDSAVRHVLLRQGVLGIKVK+MLDWDPKGKQGP
Sbjct: 149 SMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP 200



 Score = 58.5 bits (140), Expect(2) = 1e-32
 Identities = 26/38 (68%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
 Frame = -2

Query: 408 PKGKQGPTTPLPDLVTIHTPKDEDDFIRLPV-VNEIEV 298
           PKGKQGP TPLPDLVTIHTPK+E++++R P+   +IEV
Sbjct: 194 PKGKQGPKTPLPDLVTIHTPKEEEEYLRPPIPAADIEV 231