BLASTX nr result

ID: Cimicifuga21_contig00003220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003220
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271554.1| PREDICTED: uncharacterized protein LOC100259...    75   7e-12
emb|CAN66724.1| hypothetical protein VITISV_022331 [Vitis vinifera]    75   7e-12
ref|NP_001237566.1| uncharacterized protein LOC100306614 [Glycin...    69   5e-10
gb|AFK47963.1| unknown [Lotus japonicus]                               66   4e-09
tpg|DAA43111.1| TPA: hypothetical protein ZEAMMB73_115308, parti...    56   6e-06

>ref|XP_002271554.1| PREDICTED: uncharacterized protein LOC100259569 [Vitis vinifera]
           gi|297741212|emb|CBI32163.3| unnamed protein product
           [Vitis vinifera]
          Length = 120

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 50/118 (42%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
 Frame = -2

Query: 521 PTTQF-SLGFKTSIPKPTLISTISTSKFSTNVLSHTSSFRLVDVGGLQLRKSRHTVFASP 345
           P TQ  +LGF  +I  P L      S F    LS   +  L     L++R+    VFAS 
Sbjct: 12  PQTQLLNLGFHRAISSPQLPPV---SNFPCTPLSSRFNNEL----RLRVRQRMAVVFASN 64

Query: 344 TEGDIAKKKSGGSETDGAGAPGPPFLTILAGFIVLLFIFWIIGSIVMWLVGLIVNVPP 171
           T   +     G S+ + + A GPPFLTILAG ++ L +FW++GSIVMWL GLIV  PP
Sbjct: 65  TVYPVG----GDSKKEKSDAQGPPFLTILAGLLLFLLVFWLLGSIVMWLFGLIVKSPP 118


>emb|CAN66724.1| hypothetical protein VITISV_022331 [Vitis vinifera]
          Length = 890

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 50/118 (42%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
 Frame = -2

Query: 521  PTTQF-SLGFKTSIPKPTLISTISTSKFSTNVLSHTSSFRLVDVGGLQLRKSRHTVFASP 345
            P TQ  +LGF  +I  P L      S F    LS   +  L     L++R+    VFAS 
Sbjct: 782  PQTQLLNLGFHRAISSPQLPPV---SNFPCTPLSSRFNNEL----RLRVRQRMAVVFASN 834

Query: 344  TEGDIAKKKSGGSETDGAGAPGPPFLTILAGFIVLLFIFWIIGSIVMWLVGLIVNVPP 171
            T   +     G S+ + + A GPPFLTILAG ++ L +FW++GSIVMWL GLIV  PP
Sbjct: 835  TVYPVG----GDSKKEKSDAQGPPFLTILAGLLLFLLVFWLLGSIVMWLFGLIVKSPP 888


>ref|NP_001237566.1| uncharacterized protein LOC100306614 [Glycine max]
           gi|255629079|gb|ACU14884.1| unknown [Glycine max]
          Length = 123

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 52/129 (40%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
 Frame = -2

Query: 533 SPSLPTTQFSLGFKTSIPKPTLISTISTSKFSTNVLSHTSSFRLVDVGGLQLRKSRHTVF 354
           S + P    +LGF    P P    +I+  KFS +    +S+ R      L + +   TVF
Sbjct: 7   SHAAPQPHLTLGF----PSPPQFLSIAAPKFSPS----SSTIRCKGFSRLIVNQRLVTVF 58

Query: 353 A---------SPTEGDIAKKKSGGSETDGAGAPGPPFLTILAGFIVLLFIFWIIGSIVMW 201
           A         SPTEG      S  +ET  A A GPP LTILAGF VL  + W I SI+ W
Sbjct: 59  ATNPNSVGEKSPTEG------SDVNETSNA-AQGPPLLTILAGFFVLFVVCWSIWSIITW 111

Query: 200 LVGLIVNVP 174
           L+ LIVNVP
Sbjct: 112 LISLIVNVP 120


>gb|AFK47963.1| unknown [Lotus japonicus]
          Length = 130

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 55/139 (39%), Positives = 66/139 (47%)
 Frame = -2

Query: 587 GISALPSNKIHSVMATTLSPSLPTTQFSLGFKTSIPKPTLISTISTSKFSTNVLSHTSSF 408
           G S+ P  +IHS     LSPS  T +  +  +  I +  L S  +T+  S          
Sbjct: 25  GFSSTP--QIHSTPILKLSPSSSTLRCKVSRRLQINQK-LWSVPATNPNS---------- 71

Query: 407 RLVDVGGLQLRKSRHTVFASPTEGDIAKKKSGGSETDGAGAPGPPFLTILAGFIVLLFIF 228
               VGG            SP EG   K      ET  AG  GPPFLTILAG  V L I 
Sbjct: 72  ----VGG-----------KSPNEGSDVK------ETSNAGQ-GPPFLTILAGLAVFLLIT 109

Query: 227 WIIGSIVMWLVGLIVNVPP 171
           W IGSIV+WL+ LIVN+PP
Sbjct: 110 WFIGSIVVWLLSLIVNLPP 128


>tpg|DAA43111.1| TPA: hypothetical protein ZEAMMB73_115308, partial [Zea mays]
          Length = 104

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = -2

Query: 371 SRHTVFASPTEGDIAKKKSGGSETDGAGAP-GPPFLTILAGFIVLLFIFWIIGSIVMWLV 195
           +R  +FAS        + S  S  DG+ +P GPP LTILAG  V L + W++GS+V W+V
Sbjct: 43  NRQALFASG-------RGSPSSSDDGSSSPDGPPVLTILAGVTVFLLVLWVVGSVVTWIV 95

Query: 194 GLI 186
           GL+
Sbjct: 96  GLV 98


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