BLASTX nr result

ID: Cimicifuga21_contig00003215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003215
         (1951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263081.1| PREDICTED: glutamate decarboxylase-like [Vit...   834   0.0  
dbj|BAG16479.1| glutamate decarboxylase isoform1 [Solanum lycope...   811   0.0  
ref|NP_001234041.1| glutamate decarboxylase [Solanum lycopersicu...   811   0.0  
ref|XP_003534114.1| PREDICTED: glutamate decarboxylase-like [Gly...   810   0.0  
gb|AFK34235.1| unknown [Medicago truncatula]                          808   0.0  

>ref|XP_002263081.1| PREDICTED: glutamate decarboxylase-like [Vitis vinifera]
          Length = 505

 Score =  834 bits (2155), Expect = 0.0
 Identities = 408/506 (80%), Positives = 454/506 (89%), Gaps = 2/506 (0%)
 Frame = -3

Query: 1898 MVISTTTHSESDAFLNCTFASRYVRTSLPKFKMPENSIPKEAAYQIISDELMLDGNPRLN 1719
            MVISTT  S+S   L+ TFASRYVR  LPKFKMPE SIPKEAA+QIISDELMLDGNPRLN
Sbjct: 1    MVISTTI-SDSSEHLHATFASRYVRDPLPKFKMPERSIPKEAAFQIISDELMLDGNPRLN 59

Query: 1718 LASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMISHLFNAPVGAHETAV 1539
            LASFVTTWME ECDKL+M+S+NKNYVDMDEYPVTTELQNRCVNMI+HLFNAPVG +ETA+
Sbjct: 60   LASFVTTWMEEECDKLIMASVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPVGENETAI 119

Query: 1538 GVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPCDKPNIVTGANVQVCWEKFARYFEVELK 1359
            GVGTVGSSEAIMLAGLAFKRKWQ KRK+EGKP DKPNIVTGANVQVCWEKFARYFEVELK
Sbjct: 120  GVGTVGSSEAIMLAGLAFKRKWQQKRKSEGKPYDKPNIVTGANVQVCWEKFARYFEVELK 179

Query: 1358 EVKLREGYYIMDPVKAAEMVDENTICVAAILGSTLTGEFEDVKLLNELLVQKNKETGWNT 1179
            EVKLREGYY+MDPVKA EMVDENTICVAAILGSTLTGEFEDVKLLNELL +KN ETGW T
Sbjct: 180  EVKLREGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNTETGWGT 239

Query: 1178 PIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKEDLPEE 999
            PIHVDAASGGFIAPFL+P+LEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK+DLPEE
Sbjct: 240  PIHVDAASGGFIAPFLHPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPEE 299

Query: 998  LIFHINYLGADQPTFTLNFSKGSNQIIAQYYQFIRLGFEGYKDIMQNCAENAKVLKKGIE 819
            LIFHINYLG+DQPTFTLNFSKGS+QIIAQYYQFIRLGFEGYK+IM NC +NA VLK+G+ 
Sbjct: 300  LIFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMTNCMDNANVLKQGLV 359

Query: 818  KLGRFEIVSKDVGVPLLAFTLKDSSQYTVFEIAETLRKFGWIVPAYTMPADAQHIAVLRV 639
            + GRFEIVSKD+GVPL+AF+LKD+S YTVF+I+  LR++GWI+PAYTMP DA+HIAVLRV
Sbjct: 360  ETGRFEIVSKDIGVPLVAFSLKDTSNYTVFDISNNLRRYGWIIPAYTMPPDAEHIAVLRV 419

Query: 638  VIREDFSCSLAERLLKDIEKVLEELDERSSQSSSRTAHVTALMDETKGSEADGHAP--KK 465
            V+REDFS SLAERLL DIEKV+ E+D   S++++R  HV A +DET+  E +G     KK
Sbjct: 420  VVREDFSRSLAERLLSDIEKVMREMDAVQSRATTRATHVIATVDETREGEGEGSEKLNKK 479

Query: 464  SVKLTEKEVANYWKKYVDGKKTSGPC 387
            +V    +E+A YWK+ VD KKTSG C
Sbjct: 480  TVMENREEIAMYWKRVVDRKKTSGVC 505


>dbj|BAG16479.1| glutamate decarboxylase isoform1 [Solanum lycopersicum]
          Length = 502

 Score =  811 bits (2096), Expect = 0.0
 Identities = 394/505 (78%), Positives = 452/505 (89%), Gaps = 1/505 (0%)
 Frame = -3

Query: 1898 MVISTTTHSESDAFLNCTFASRYVRTSLPKFKMPENSIPKEAAYQIISDELMLDGNPRLN 1719
            MV++TT+  +S+  L+CTFASRYV+  LPKFK+P+ S+PKEAAYQI++DELMLDGNPRLN
Sbjct: 1    MVLTTTSIRDSEESLHCTFASRYVQEPLPKFKIPKKSMPKEAAYQIVNDELMLDGNPRLN 60

Query: 1718 LASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMISHLFNAPVGAHETAV 1539
            LASFV+TWMEPECDKL+MSSINKNYVDMDEYPVTTELQNRCVNM++HLF+APVG  ETAV
Sbjct: 61   LASFVSTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMLAHLFHAPVGDDETAV 120

Query: 1538 GVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPCDKPNIVTGANVQVCWEKFARYFEVELK 1359
            GVGTVGSSEAIMLAGLAFKRKWQ+KRKAEGKP DKPNIVTGANVQVCWEKFARYFEVELK
Sbjct: 121  GVGTVGSSEAIMLAGLAFKRKWQSKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELK 180

Query: 1358 EVKLREGYYIMDPVKAAEMVDENTICVAAILGSTLTGEFEDVKLLNELLVQKNKETGWNT 1179
            EVKL+EGYY+MDP KA E+VDENTICVAAILGSTLTGEFEDVKLLNELL +KNKETGW T
Sbjct: 181  EVKLKEGYYVMDPAKAVEIVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGWET 240

Query: 1178 PIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKEDLPEE 999
            PIHVDAASGGFIAPFL+P+LEWDFRLPLVKSINVSGHKYGLVYAGVGWV+WR+KEDLP+E
Sbjct: 241  PIHVDAASGGFIAPFLWPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPDE 300

Query: 998  LIFHINYLGADQPTFTLNFSKGSNQIIAQYYQFIRLGFEGYKDIMQNCAENAKVLKKGIE 819
            L+FHINYLG+DQPTFTLNFSKGS QIIAQYYQ IRLGFEGYKD+M+NC  NAKVL +GI 
Sbjct: 301  LVFHINYLGSDQPTFTLNFSKGSYQIIAQYYQLIRLGFEGYKDVMKNCLSNAKVLTEGIT 360

Query: 818  KLGRFEIVSKDVGVPLLAFTLKDSSQYTVFEIAETLRKFGWIVPAYTMPADAQHIAVLRV 639
            K+GRF+IVSKDVGVP++AF+L+DSS+YTVFE++E LR+FGWIVPAYTMP DA+HIAVLRV
Sbjct: 361  KMGRFDIVSKDVGVPVVAFSLRDSSKYTVFEVSEHLRRFGWIVPAYTMPPDAEHIAVLRV 420

Query: 638  VIREDFSCSLAERLLKDIEKVLEELDERSSQSSSRTAHVTALMDETKGSEADG-HAPKKS 462
            VIREDFS SLAERL+ DIEK+L ELD +  +  ++   VTA  +E +  + DG H     
Sbjct: 421  VIREDFSHSLAERLVSDIEKILSELDTQPPRLPTKAVRVTA--EEVRDDKGDGLHHFHMD 478

Query: 461  VKLTEKEVANYWKKYVDGKKTSGPC 387
               T+K++  +W+K + GKKTSG C
Sbjct: 479  TVETQKDIIKHWRK-IAGKKTSGVC 502


>ref|NP_001234041.1| glutamate decarboxylase [Solanum lycopersicum]
            gi|1706318|sp|P54767.1|DCE_SOLLC RecName: Full=Glutamate
            decarboxylase; Short=GAD; AltName: Full=ERT D1
            gi|995555|emb|CAA56812.1| unnamed protein product
            [Solanum lycopersicum]
          Length = 502

 Score =  811 bits (2095), Expect = 0.0
 Identities = 394/505 (78%), Positives = 452/505 (89%), Gaps = 1/505 (0%)
 Frame = -3

Query: 1898 MVISTTTHSESDAFLNCTFASRYVRTSLPKFKMPENSIPKEAAYQIISDELMLDGNPRLN 1719
            MV++TT+  +S+  L+CTFASRYV+  LPKFKMP+ S+PKEAAYQI++DELMLDGNPRLN
Sbjct: 1    MVLTTTSIRDSEESLHCTFASRYVQEPLPKFKMPKKSMPKEAAYQIVNDELMLDGNPRLN 60

Query: 1718 LASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMISHLFNAPVGAHETAV 1539
            LASFV+TWMEPECDKL+MSSINKNYVDMDEYPVTTELQNRCVNM++HLF+APVG  ETAV
Sbjct: 61   LASFVSTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMLAHLFHAPVGDDETAV 120

Query: 1538 GVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPCDKPNIVTGANVQVCWEKFARYFEVELK 1359
            GVGTVGSSEAIMLAGLAFKRKWQ+KRKAEGKP DKPNIVTGANVQVCWEKFARYFEVELK
Sbjct: 121  GVGTVGSSEAIMLAGLAFKRKWQSKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELK 180

Query: 1358 EVKLREGYYIMDPVKAAEMVDENTICVAAILGSTLTGEFEDVKLLNELLVQKNKETGWNT 1179
            EVKL+EGYY+MDP KA E+VDENTICVAAILGSTLTGEFEDVKLLNELL +KNKETGW T
Sbjct: 181  EVKLKEGYYVMDPAKAVEIVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGWET 240

Query: 1178 PIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKEDLPEE 999
            PIHVDAASGGFIAPFL+P+LEWDFRLPLVKSINVSGHKYGLVYAGVGWV+WR+KEDLP+E
Sbjct: 241  PIHVDAASGGFIAPFLWPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPDE 300

Query: 998  LIFHINYLGADQPTFTLNFSKGSNQIIAQYYQFIRLGFEGYKDIMQNCAENAKVLKKGIE 819
            L+FHINYLG+DQPTFTLNFSKGS QIIAQYYQ IRLGFEGYK++M+NC  NAKVL +GI 
Sbjct: 301  LVFHINYLGSDQPTFTLNFSKGSYQIIAQYYQLIRLGFEGYKNVMKNCLSNAKVLTEGIT 360

Query: 818  KLGRFEIVSKDVGVPLLAFTLKDSSQYTVFEIAETLRKFGWIVPAYTMPADAQHIAVLRV 639
            K+GRF+IVSKDVGVP++AF+L+DSS+YTVFE++E LR+FGWIVPAYTMP DA+HIAVLRV
Sbjct: 361  KMGRFDIVSKDVGVPVVAFSLRDSSKYTVFEVSEHLRRFGWIVPAYTMPPDAEHIAVLRV 420

Query: 638  VIREDFSCSLAERLLKDIEKVLEELDERSSQSSSRTAHVTALMDETKGSEADG-HAPKKS 462
            VIREDFS SLAERL+ DIEK+L ELD +  +  ++   VTA  +E +  + DG H     
Sbjct: 421  VIREDFSHSLAERLVSDIEKILSELDTQPPRLPTKAVRVTA--EEVRDDKGDGLHHFHMD 478

Query: 461  VKLTEKEVANYWKKYVDGKKTSGPC 387
               T+K++  +W+K + GKKTSG C
Sbjct: 479  TVETQKDIIKHWRK-IAGKKTSGVC 502


>ref|XP_003534114.1| PREDICTED: glutamate decarboxylase-like [Glycine max]
          Length = 498

 Score =  810 bits (2091), Expect = 0.0
 Identities = 398/505 (78%), Positives = 446/505 (88%), Gaps = 1/505 (0%)
 Frame = -3

Query: 1898 MVISTTTH-SESDAFLNCTFASRYVRTSLPKFKMPENSIPKEAAYQIISDELMLDGNPRL 1722
            ++ ST TH  E D  LN TFASRYVR  +PKFKMPE SIPK+AA+QII+DELMLDG PRL
Sbjct: 2    VLTSTATHPDEKDQSLNSTFASRYVRDPIPKFKMPEKSIPKDAAFQIINDELMLDGAPRL 61

Query: 1721 NLASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMISHLFNAPVGAHETA 1542
            NLASFVTTWMEPECDKL+M+S+NKNYVDMDEYPVTTELQNRCVN+I++LF+AP+   ETA
Sbjct: 62   NLASFVTTWMEPECDKLIMASLNKNYVDMDEYPVTTELQNRCVNIIANLFHAPISEEETA 121

Query: 1541 VGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPCDKPNIVTGANVQVCWEKFARYFEVEL 1362
            VGVGTVGSSEAIMLAGLAFKRKWQ KRKAEGKP DKPNIVTGANVQVCWEKFARYFEVEL
Sbjct: 122  VGVGTVGSSEAIMLAGLAFKRKWQTKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVEL 181

Query: 1361 KEVKLREGYYIMDPVKAAEMVDENTICVAAILGSTLTGEFEDVKLLNELLVQKNKETGWN 1182
            KEVKL+EGYY+MDP KA EMVDENTICVAAILGST+TGEFEDVKLLNELL +KNKETGW+
Sbjct: 182  KEVKLKEGYYVMDPAKAVEMVDENTICVAAILGSTMTGEFEDVKLLNELLTEKNKETGWD 241

Query: 1181 TPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKEDLPE 1002
            TPIHVDAASGGFIAPFLYP+LEWDFRLPLVKSINVSGHKYGLVY GVGWVVWR+K+DLP+
Sbjct: 242  TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKDDLPD 301

Query: 1001 ELIFHINYLGADQPTFTLNFSKGSNQIIAQYYQFIRLGFEGYKDIMQNCAENAKVLKKGI 822
            EL+FHINYLG+DQPTFTLNFSKGS+QIIAQYYQ IRLGFEGYK+IM+NC ENA+VLK+GI
Sbjct: 302  ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKNIMENCLENARVLKEGI 361

Query: 821  EKLGRFEIVSKDVGVPLLAFTLKDSSQYTVFEIAETLRKFGWIVPAYTMPADAQHIAVLR 642
            E+ GRF I+SKD+GVPL+AF+LKDSSQ+TVFEIA+ LRKFGWIVPAYTMP DAQHIAVLR
Sbjct: 362  ERTGRFNIISKDIGVPLVAFSLKDSSQHTVFEIADHLRKFGWIVPAYTMPPDAQHIAVLR 421

Query: 641  VVIREDFSCSLAERLLKDIEKVLEELDERSSQSSSRTAHVTALMDETKGSEADGHAPKKS 462
            VVIREDFS  LAERL  DIEKV++ LD   S  +++ AH+TA+  ET           KS
Sbjct: 422  VVIREDFSRGLAERLAADIEKVVKLLDTLPSPLTTKVAHITAITSETS-------EKVKS 474

Query: 461  VKLTEKEVANYWKKYVDGKKTSGPC 387
               T+KE+A YWK+ VDGK+  G C
Sbjct: 475  AIETQKEIALYWKRLVDGKRL-GAC 498


>gb|AFK34235.1| unknown [Medicago truncatula]
          Length = 499

 Score =  808 bits (2087), Expect = 0.0
 Identities = 394/506 (77%), Positives = 443/506 (87%), Gaps = 2/506 (0%)
 Frame = -3

Query: 1898 MVISTTTH--SESDAFLNCTFASRYVRTSLPKFKMPENSIPKEAAYQIISDELMLDGNPR 1725
            MVIS+T     E +  + CTFASRYVR  +PKFKMPENSIPK+AAY+II+DELMLDG PR
Sbjct: 1    MVISSTVSHPDEQNESIACTFASRYVREQVPKFKMPENSIPKDAAYRIINDELMLDGKPR 60

Query: 1724 LNLASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMISHLFNAPVGAHET 1545
            LNLASFVTTWMEPECDKL+M S+NKNYVDMDEYPVTTELQNRCVN+I+HLFNAP+G+ ET
Sbjct: 61   LNLASFVTTWMEPECDKLIMDSLNKNYVDMDEYPVTTELQNRCVNIIAHLFNAPIGSEET 120

Query: 1544 AVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPCDKPNIVTGANVQVCWEKFARYFEVE 1365
            AVGVGTVGSSEAIMLAGLAFKRKWQ KRKAEGKP DKPNIVTGANVQVCWE+FARYFEVE
Sbjct: 121  AVGVGTVGSSEAIMLAGLAFKRKWQTKRKAEGKPYDKPNIVTGANVQVCWEQFARYFEVE 180

Query: 1364 LKEVKLREGYYIMDPVKAAEMVDENTICVAAILGSTLTGEFEDVKLLNELLVQKNKETGW 1185
            LKEVKL E YY+MDP+KA EMVDENTICVAAILGSTLTGEFEDVKLLNELL +KNKETGW
Sbjct: 181  LKEVKLTEDYYVMDPLKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGW 240

Query: 1184 NTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKEDLP 1005
            +TPIHVDAASGGF+APFLYP+L WDFRLPLVKSINVSGHKYGLVY G+GWVVWR K DLP
Sbjct: 241  DTPIHVDAASGGFVAPFLYPDLLWDFRLPLVKSINVSGHKYGLVYPGIGWVVWRHKADLP 300

Query: 1004 EELIFHINYLGADQPTFTLNFSKGSNQIIAQYYQFIRLGFEGYKDIMQNCAENAKVLKKG 825
            ++L+FHINYLG+DQPTFTLNFSKGS+QIIAQYYQFIRLGFEGYK++M+NC  N + LK+G
Sbjct: 301  DDLVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNVMENCLANTRTLKEG 360

Query: 824  IEKLGRFEIVSKDVGVPLLAFTLKDSSQYTVFEIAETLRKFGWIVPAYTMPADAQHIAVL 645
            IEK GRF+IVSKD+GVPL+AF+LKDSS++TVFEIA+ LRK+GWIVPAYTMPADA+HIAVL
Sbjct: 361  IEKTGRFKIVSKDIGVPLVAFSLKDSSKHTVFEIADHLRKYGWIVPAYTMPADAKHIAVL 420

Query: 644  RVVIREDFSCSLAERLLKDIEKVLEELDERSSQSSSRTAHVTALMDETKGSEADGHAPKK 465
            RVVIREDFSCSLAERL+ DIEKV+  LD   S  +S+ AHV  +  ET          KK
Sbjct: 421  RVVIREDFSCSLAERLVSDIEKVVNLLDTLPSSINSKDAHVAVIASET------SEEVKK 474

Query: 464  SVKLTEKEVANYWKKYVDGKKTSGPC 387
             +  T+ E+  YWKK VDGK+  G C
Sbjct: 475  DITETQAEILRYWKKLVDGKRV-GAC 499


Top