BLASTX nr result

ID: Cimicifuga21_contig00003201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003201
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324415.1| predicted protein [Populus trichocarpa] gi|2...    92   1e-16
ref|XP_003629641.1| hypothetical protein MTR_8g083450 [Medicago ...    75   2e-11
ref|XP_003534195.1| PREDICTED: uncharacterized protein LOC100306...    70   3e-10
ref|XP_003528940.1| PREDICTED: uncharacterized protein LOC100798...    70   4e-10
ref|XP_003530613.1| PREDICTED: uncharacterized protein LOC100500...    65   1e-08

>ref|XP_002324415.1| predicted protein [Populus trichocarpa] gi|222865849|gb|EEF02980.1|
           predicted protein [Populus trichocarpa]
          Length = 83

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 49/83 (59%), Positives = 61/83 (73%), Gaps = 7/83 (8%)
 Frame = +3

Query: 165 MPSPGTIDVATSPKAGKGEP----AMNSPKGQCLCSPTTHDGSFRCRFHRSVASTW--MT 326
           M S G + ++TSP++G GE     A +SPKGQCLCSPTTH GSFRCR HR+  S+   M 
Sbjct: 1   MASHGKLSISTSPESGNGERSSAVASSSPKGQCLCSPTTHQGSFRCRLHRAPRSSAAPMM 60

Query: 327 KRSKSMPP-NRSTAVSPKSVQST 392
           KRSKSMPP +  T++SPKSV+ST
Sbjct: 61  KRSKSMPPKDAPTSLSPKSVEST 83


>ref|XP_003629641.1| hypothetical protein MTR_8g083450 [Medicago truncatula]
           gi|357521029|ref|XP_003630803.1| hypothetical protein
           MTR_8g103590 [Medicago truncatula]
           gi|355523663|gb|AET04117.1| hypothetical protein
           MTR_8g083450 [Medicago truncatula]
           gi|355524825|gb|AET05279.1| hypothetical protein
           MTR_8g103590 [Medicago truncatula]
          Length = 102

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 9/77 (11%)
 Frame = +3

Query: 183 IDVATSPKAGKG---EPAMNSPKGQCLCSPTTHDGSFRCRFHR------SVASTWMTKRS 335
           +  ++SPK+  G   + A + PKG+CLCSPTTH+GSFRCRFHR      S    WM KR+
Sbjct: 27  VSTSSSPKSDSGIGGDAAASFPKGRCLCSPTTHEGSFRCRFHRSGSFSSSAPPPWM-KRT 85

Query: 336 KSMPPNRSTAVSPKSVQ 386
           KSMPPN + +V   S Q
Sbjct: 86  KSMPPNHNKSVVSVSPQ 102


>ref|XP_003534195.1| PREDICTED: uncharacterized protein LOC100306261 [Glycine max]
           gi|255628035|gb|ACU14362.1| unknown [Glycine max]
          Length = 82

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 39/64 (60%), Positives = 46/64 (71%), Gaps = 8/64 (12%)
 Frame = +3

Query: 189 VATSPKA----GKGEPAMNS-PKGQCLCSPTTHDGSFRCRFHRSVAST---WMTKRSKSM 344
           V+TSPK+    G G  A+ S PKGQCLCSPTTH+GSFRCR HR   ++   WM KRSKSM
Sbjct: 12  VSTSPKSDSGSGGGGGAVGSLPKGQCLCSPTTHEGSFRCRLHRGPTASPTNWM-KRSKSM 70

Query: 345 PPNR 356
           P N+
Sbjct: 71  PANK 74


>ref|XP_003528940.1| PREDICTED: uncharacterized protein LOC100798389 [Glycine max]
          Length = 80

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 37/62 (59%), Positives = 44/62 (70%), Gaps = 6/62 (9%)
 Frame = +3

Query: 189 VATSPKA---GKGEPAMNSPKGQCLCSPTTHDGSFRCRFHR---SVASTWMTKRSKSMPP 350
           V+TSPK+   G G    + PKGQCLCSPTTH+GSFRCR HR   +  + WM KRSKSMP 
Sbjct: 12  VSTSPKSDSGGGGGGTGSLPKGQCLCSPTTHEGSFRCRLHRGHTASPANWM-KRSKSMPA 70

Query: 351 NR 356
           N+
Sbjct: 71  NK 72


>ref|XP_003530613.1| PREDICTED: uncharacterized protein LOC100500563 [Glycine max]
           gi|255630637|gb|ACU15678.1| unknown [Glycine max]
          Length = 69

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 5/56 (8%)
 Frame = +3

Query: 189 VATSPKAGKGEPAMNSPKGQCLCSPTTHDGSFRCRFHRSVAS-----TWMTKRSKS 341
           V+  P++  G    +SPKGQCLCSPTTH+GSFRCRFHRS  +     +WM KRS +
Sbjct: 14  VSVIPESDSGNGTTSSPKGQCLCSPTTHEGSFRCRFHRSATASSSPPSWM-KRSNN 68


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