BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003194
         (1130 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron sp...   387   e-105
ref|XP_002305823.1| predicted protein [Populus trichocarpa] gi|2...   386   e-105
ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus c...   364   2e-98
ref|NP_001239818.1| uncharacterized protein LOC100804132 [Glycin...   354   3e-95
ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron sp...   352   1e-94

>ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
           CRS2, chloroplastic [Vitis vinifera]
           gi|296087264|emb|CBI33638.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  387 bits (995), Expect = e-105
 Identities = 186/247 (75%), Positives = 214/247 (86%), Gaps = 1/247 (0%)
 Frame = +2

Query: 125 MLHSVSAPNTFINVPPCRSFH-LRRRRLVTTKLCVAAASLPDVDAVKVEYTPWLIVGLGN 301
           ML++VS P+T I+      +H  RRRRL   +LCV+A SLPD + +KVEYTPWLIVGLGN
Sbjct: 1   MLYAVSGPSTSISCRRSLDYHGFRRRRLAPARLCVSA-SLPDANGIKVEYTPWLIVGLGN 59

Query: 302 PGNKYHGTRHNIGFEMIDRISQAQSIKLNTIQSKALMGIGGIGEVPVLLAKSQAYMNYSG 481
           PGNKYHGTRHN+GFEMIDRISQ + I LNTIQSKAL+GIG IGEVP+LLAK QAYMN+SG
Sbjct: 60  PGNKYHGTRHNVGFEMIDRISQEEGILLNTIQSKALIGIGSIGEVPILLAKPQAYMNFSG 119

Query: 482 ESVGPLAAYYQVPLRQILLIYDEMSLPNGVMRVQPKGGHGHHNGVKSVIDHLDGCRAFPR 661
           ESVGPLAAYYQVPLR IL++YDEM+LPNGV+R+ P+GGHG+HNG+K+V+ HLDGCR FPR
Sbjct: 120 ESVGPLAAYYQVPLRHILVVYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGHLDGCREFPR 179

Query: 662 LCIGIGNPPGTMDMKAYLLQKFSAEERKQVDVALEQGVEAVRNLVLKGFDDGITKFNLGQ 841
           LCIGIGNPPGTMDMKAYLLQKFS EERKQ+D A EQG+ AVRNLVL GF+   T+FNLGQ
Sbjct: 180 LCIGIGNPPGTMDMKAYLLQKFSFEERKQIDAAQEQGIGAVRNLVLNGFNHSTTRFNLGQ 239

Query: 842 KYKYHKV 862
           KYKYHKV
Sbjct: 240 KYKYHKV 246


>ref|XP_002305823.1| predicted protein [Populus trichocarpa] gi|222848787|gb|EEE86334.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  386 bits (991), Expect = e-105
 Identities = 187/247 (75%), Positives = 216/247 (87%), Gaps = 1/247 (0%)
 Frame = +2

Query: 125 MLHSVSAPNTFINVPPCRSFHLRRRRLVTTKLCVAAASLPD-VDAVKVEYTPWLIVGLGN 301
           ML++VS P T I+ P    FH  RR LV+ +LCV A SLPD  + VKVEYTPWLIVGLGN
Sbjct: 1   MLYAVSTPRTCISCPRSSRFH--RRNLVSVRLCVRA-SLPDNANGVKVEYTPWLIVGLGN 57

Query: 302 PGNKYHGTRHNIGFEMIDRISQAQSIKLNTIQSKALMGIGGIGEVPVLLAKSQAYMNYSG 481
           PG KYHGTRHN+GFEMIDRI+QA+ + +NTIQSKAL+GIG IGEVP+LLAK QAYMN+SG
Sbjct: 58  PGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKPQAYMNFSG 117

Query: 482 ESVGPLAAYYQVPLRQILLIYDEMSLPNGVMRVQPKGGHGHHNGVKSVIDHLDGCRAFPR 661
           ESVGPLAA+Y++PLR ILLIYDEM+LPNG++RVQPKGGHGHHNGVKSV+DHLDGCR FPR
Sbjct: 118 ESVGPLAAHYKIPLRHILLIYDEMNLPNGILRVQPKGGHGHHNGVKSVMDHLDGCREFPR 177

Query: 662 LCIGIGNPPGTMDMKAYLLQKFSAEERKQVDVALEQGVEAVRNLVLKGFDDGITKFNLGQ 841
           LCIGIGNPPGTMDMKA+LLQKFS  ER+Q+D +LEQGVEA+R L+L GF + IT+FNLGQ
Sbjct: 178 LCIGIGNPPGTMDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFTNKITRFNLGQ 237

Query: 842 KYKYHKV 862
           KYKYHKV
Sbjct: 238 KYKYHKV 244


>ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
           gi|223544111|gb|EEF45636.1| peptidyl-tRNA hydrolase,
           putative [Ricinus communis]
          Length = 253

 Score =  364 bits (935), Expect = 2e-98
 Identities = 180/256 (70%), Positives = 213/256 (83%), Gaps = 10/256 (3%)
 Frame = +2

Query: 125 MLHSVSAPNTFINVPPCRSFHLRRRRLVTTKLCVAAASLPDVD--AVKVEYTPWLIVGLG 298
           ML++VS PNT I+ P  R+   R R L +T+L +   SLP+      K+EYTPWLIVGLG
Sbjct: 1   MLYAVSTPNTCISCP--RNSFFRPRHLASTRLSIRV-SLPENGNGVAKIEYTPWLIVGLG 57

Query: 299 NPGNKYHGTRHNI--------GFEMIDRISQAQSIKLNTIQSKALMGIGGIGEVPVLLAK 454
           NPGNKYHGTRHN+        GFEMID+I++A+++ +NTIQSKAL+GIG I EVP+LL K
Sbjct: 58  NPGNKYHGTRHNVTNASLDLVGFEMIDKIAKAEAVAMNTIQSKALIGIGCIKEVPILLVK 117

Query: 455 SQAYMNYSGESVGPLAAYYQVPLRQILLIYDEMSLPNGVMRVQPKGGHGHHNGVKSVIDH 634
            QAYMN+SGESVGPLAA+YQVPLR ILLIYDEMSLPNGVMR+QPKGGHGHHNGVKSV++H
Sbjct: 118 PQAYMNFSGESVGPLAAHYQVPLRHILLIYDEMSLPNGVMRLQPKGGHGHHNGVKSVMEH 177

Query: 635 LDGCRAFPRLCIGIGNPPGTMDMKAYLLQKFSAEERKQVDVALEQGVEAVRNLVLKGFDD 814
           LDGCR FPRLCIGIGNPPGTMDM+A+LLQKFS+ ER+Q+D AL QG++AVR LVL GF+ 
Sbjct: 178 LDGCREFPRLCIGIGNPPGTMDMRAFLLQKFSSTEREQIDAALGQGIDAVRTLVLSGFNQ 237

Query: 815 GITKFNLGQKYKYHKV 862
            IT+FNLGQKYKYHKV
Sbjct: 238 NITRFNLGQKYKYHKV 253


>ref|NP_001239818.1| uncharacterized protein LOC100804132 [Glycine max]
           gi|255645504|gb|ACU23247.1| unknown [Glycine max]
          Length = 244

 Score =  354 bits (908), Expect = 3e-95
 Identities = 167/246 (67%), Positives = 201/246 (81%)
 Frame = +2

Query: 125 MLHSVSAPNTFINVPPCRSFHLRRRRLVTTKLCVAAASLPDVDAVKVEYTPWLIVGLGNP 304
           MLH+VSAP+  ++ P   + H     +  T   V  +     +  KVEYTPWLI+GLGNP
Sbjct: 1   MLHAVSAPSFCLSYPG--NLHYPPSSVQKTCFSVRCSVSQTKNGAKVEYTPWLIIGLGNP 58

Query: 305 GNKYHGTRHNIGFEMIDRISQAQSIKLNTIQSKALMGIGGIGEVPVLLAKSQAYMNYSGE 484
           GNKYHGTRHN+GFE+ID +S+A+ I++NTIQSKAL+GIG IGEVP+LLAK Q YMN+SGE
Sbjct: 59  GNKYHGTRHNVGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAKPQTYMNFSGE 118

Query: 485 SVGPLAAYYQVPLRQILLIYDEMSLPNGVMRVQPKGGHGHHNGVKSVIDHLDGCRAFPRL 664
           SVGPLAAYYQVPLR ILL++DE SLPNGV+R+QPKGGHGHHNG+K+V+ HLDGC AFPRL
Sbjct: 119 SVGPLAAYYQVPLRHILLVFDETSLPNGVLRLQPKGGHGHHNGLKNVMGHLDGCSAFPRL 178

Query: 665 CIGIGNPPGTMDMKAYLLQKFSAEERKQVDVALEQGVEAVRNLVLKGFDDGITKFNLGQK 844
            +GIGNPPGTMD++AYLLQKFS EERKQ+D +LEQ V AVR +VL GFD  + +FNLGQK
Sbjct: 179 AVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFDQHVNRFNLGQK 238

Query: 845 YKYHKV 862
           YKYHKV
Sbjct: 239 YKYHKV 244


>ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
           CRS2-B, chloroplastic-like [Cucumis sativus]
           gi|449519774|ref|XP_004166909.1| PREDICTED:
           chloroplastic group IIB intron splicing facilitator
           CRS2-B, chloroplastic-like [Cucumis sativus]
          Length = 249

 Score =  352 bits (903), Expect = 1e-94
 Identities = 170/222 (76%), Positives = 193/222 (86%), Gaps = 2/222 (0%)
 Frame = +2

Query: 203 LVTTKLCVAAASLPDVDA--VKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDRISQAQS 376
           LV+T+L V A+S PD D+  +KVEYTPWLIVGLGNPGNKYHGTRHN+GFEMID I+QAQ 
Sbjct: 29  LVSTRLSVRASS-PDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQG 87

Query: 377 IKLNTIQSKALMGIGGIGEVPVLLAKSQAYMNYSGESVGPLAAYYQVPLRQILLIYDEMS 556
           I +NTIQSKAL+GIG IGEVP+LLAK Q YMN+ GESVGPLAA+YQ+PLR +LL YDEM+
Sbjct: 88  ILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMN 147

Query: 557 LPNGVMRVQPKGGHGHHNGVKSVIDHLDGCRAFPRLCIGIGNPPGTMDMKAYLLQKFSAE 736
           LPNGV+R+QPK GHGHHNGVKSV+ HLDG R FPRLCIGIGNPPGTMDMKA+LLQKFS+ 
Sbjct: 148 LPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSV 207

Query: 737 ERKQVDVALEQGVEAVRNLVLKGFDDGITKFNLGQKYKYHKV 862
           ERKQ+D ALEQGVEAVR L L GF   + +FNL QKYKYHKV
Sbjct: 208 ERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 249