BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003190
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ...   418   e-114
emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]   405   e-110
ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP...   403   e-110
ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP...   401   e-109
ref|XP_002316998.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107

>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Vitis vinifera]
          Length = 417

 Score =  418 bits (1074), Expect = e-114
 Identities = 213/292 (72%), Positives = 233/292 (79%)
 Frame = -3

Query: 1205 VIRNKQTGQPESYGFIEFATRAAAERVLQTYNGTPMPNTELNFRLNWATLGSGEKRGDDS 1026
            VIRNKQTGQ E YGFIE ATRAAAER+LQTYNGT MPN+E NFRLNWATLG+GE+R DD+
Sbjct: 121  VIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDT 180

Query: 1025 ADYTIFVGDLAADVTDYTLQETFRVSFPSVRGAKVVTDRLTGRSKGYGFVKFADESEQVR 846
             DYTIFVGDLA+DVTDY LQETFR  +PSV+GAKVVTDR TGRSKGYGFV+F DE EQ+R
Sbjct: 181  PDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLR 240

Query: 845  AMSDMNGMFCSSRPMRIGPATNKKTVGGQQQFPKATYQNTDATQNENDPNNTTIFVGGLD 666
            AM++MNGMFCS+RPMRIGPA  KK VGG QQF KA++QNT   Q E+DPNNTTIFVGGLD
Sbjct: 241  AMNEMNGMFCSTRPMRIGPAATKKPVGG-QQFQKASFQNTQGNQGESDPNNTTIFVGGLD 299

Query: 665  SIVTDDLLRQVFSQFGELVHVKIPVGKRCGFVQFANRACANEALLMLNGTSLGGQNIRLS 486
            S VTDD LRQVFSQ+GELVHVKIPVGKRCGFVQFANRACA +AL  LNGT LG Q+IRLS
Sbjct: 300  SNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLS 359

Query: 485  WGRSPANKQETSAGWVQPQPDPNQWXXXXXXXXXXXXXXXXXXAPPAQDPNM 330
            WGRSP+NK        Q QPD  QW                  APP QDPNM
Sbjct: 360  WGRSPSNK--------QAQPDQAQW--NGGYYGYAQGYEAYGYAPPPQDPNM 401


>emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
          Length = 410

 Score =  405 bits (1041), Expect = e-110
 Identities = 208/292 (71%), Positives = 228/292 (78%)
 Frame = -3

Query: 1205 VIRNKQTGQPESYGFIEFATRAAAERVLQTYNGTPMPNTELNFRLNWATLGSGEKRGDDS 1026
            VIRNKQTGQ E YGFIE ATRAAAER+LQTYNGT MPN+E NFRLNWATLG+GE+R DD+
Sbjct: 106  VIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDT 165

Query: 1025 ADYTIFVGDLAADVTDYTLQETFRVSFPSVRGAKVVTDRLTGRSKGYGFVKFADESEQVR 846
             DYTIFVGDLA+DVTDY LQETFR  +PSV+GAKVVTDR TGRSKGYGFV+F DE EQ+R
Sbjct: 166  PDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLR 225

Query: 845  AMSDMNGMFCSSRPMRIGPATNKKTVGGQQQFPKATYQNTDATQNENDPNNTTIFVGGLD 666
            AM++MNGMFCS+RPMRIGPA  KK VG       A++QNT   Q E+DPNNTTIFVGGLD
Sbjct: 226  AMNEMNGMFCSTRPMRIGPAATKKPVG-------ASFQNTQGXQGESDPNNTTIFVGGLD 278

Query: 665  SIVTDDLLRQVFSQFGELVHVKIPVGKRCGFVQFANRACANEALLMLNGTSLGGQNIRLS 486
            S VTDD LRQVFSQ+GELVHVKIPVGKRCGFVQFANRACA +AL  LNGT LG Q+IRLS
Sbjct: 279  SNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLS 338

Query: 485  WGRSPANKQETSAGWVQPQPDPNQWXXXXXXXXXXXXXXXXXXAPPAQDPNM 330
            WGRSP+NK        Q QPD  QW                  APP QDPNM
Sbjct: 339  WGRSPSNK--------QAQPDQAQW--NGGYYGYAQGYEAYGYAPPPQDPNM 380


>ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis sativus]
            gi|449472157|ref|XP_004153511.1| PREDICTED:
            polyadenylate-binding protein RBP45-like [Cucumis
            sativus]
          Length = 408

 Score =  403 bits (1035), Expect = e-110
 Identities = 209/296 (70%), Positives = 227/296 (76%), Gaps = 4/296 (1%)
 Frame = -3

Query: 1205 VIRNKQTGQPESYGFIEFATRAAAERVLQTYNGTPMPNTELNFRLNWATLGSGEKRGDDS 1026
            VIRNKQTGQ E YGFIEF TR AAERVLQTYNGT MPN   NFRLNWA+  +GEKR DDS
Sbjct: 97   VIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDS 154

Query: 1025 ADYTIFVGDLAADVTDYTLQETFRVSFPSVRGAKVVTDRLTGRSKGYGFVKFADESEQVR 846
             DYTIFVGDLA DVTDY LQETFR  + SV+GAKVV DRLTGR+KGYGFVKF DESEQ+R
Sbjct: 155  PDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIR 214

Query: 845  AMSDMNGMFCSSRPMRIGPATNKKTVGGQQQFPKATYQNTDATQNENDPNNTTIFVGGLD 666
            AM++MNG+ CSSRPMRIGPA NK T  G QQF K +YQN   TQNENDPNNTTIFVG LD
Sbjct: 215  AMTEMNGVHCSSRPMRIGPAANKNT-SGSQQFSKTSYQNPPGTQNENDPNNTTIFVGNLD 273

Query: 665  SIVTDDLLRQVFSQFGELVHVKIPVGKRCGFVQFANRACANEALLMLNGTSLGGQNIRLS 486
            S VTD+ LRQVFSQ+GELVHVKIP GKRCGFVQF++R+CA EAL +LNGT +GGQNIRLS
Sbjct: 274  SNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRILNGTPIGGQNIRLS 333

Query: 485  WGRSPANKQETSAGWVQPQPDPNQW----XXXXXXXXXXXXXXXXXXAPPAQDPNM 330
            WGRSP+NK        QPQ DPNQW                      AP AQDPNM
Sbjct: 334  WGRSPSNK--------QPQADPNQWNGGGGGGGGYYGYGQGYENYSYAPAAQDPNM 381


>ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
            sativus]
          Length = 404

 Score =  401 bits (1030), Expect = e-109
 Identities = 208/292 (71%), Positives = 225/292 (77%)
 Frame = -3

Query: 1205 VIRNKQTGQPESYGFIEFATRAAAERVLQTYNGTPMPNTELNFRLNWATLGSGEKRGDDS 1026
            VIRNKQTGQ E YGFIEF TR AAERVLQTYNGT MPN   NFRLNWA+  +GEKR DDS
Sbjct: 97   VIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDS 154

Query: 1025 ADYTIFVGDLAADVTDYTLQETFRVSFPSVRGAKVVTDRLTGRSKGYGFVKFADESEQVR 846
             DYTIFVGDLA DVTDY LQETFR  + SV+GAKVV DRLTGR+KGYGFVKF DESEQ+R
Sbjct: 155  PDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMR 214

Query: 845  AMSDMNGMFCSSRPMRIGPATNKKTVGGQQQFPKATYQNTDATQNENDPNNTTIFVGGLD 666
            AM++MNG+ CSSRPMRIGPA NK T GGQQ F K +YQN    QNENDPNNTTIFVG LD
Sbjct: 215  AMTEMNGVHCSSRPMRIGPAANKNTSGGQQ-FSKTSYQNPQGAQNENDPNNTTIFVGNLD 273

Query: 665  SIVTDDLLRQVFSQFGELVHVKIPVGKRCGFVQFANRACANEALLMLNGTSLGGQNIRLS 486
            + VTD+ LRQVF Q+GELVHVKIPVGKRCGFVQFA+R CA EAL +LNGT +GGQNIRLS
Sbjct: 274  ANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLS 333

Query: 485  WGRSPANKQETSAGWVQPQPDPNQWXXXXXXXXXXXXXXXXXXAPPAQDPNM 330
            WGRSP+NK        QPQ DPNQW                  AP  QDPNM
Sbjct: 334  WGRSPSNK--------QPQADPNQW-NGGGYYGYGQGYENYSYAPAPQDPNM 376



 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
 Frame = -3

Query: 1016 TIFVGDLAADVTDYTLQETFRVSFPSVRGAKVVTDRLTGRSKGYGFVKFADESEQVRAMS 837
            T+++GDL   + +  +   F  +   V   KV+ ++ TG+S+GYGF++F       R + 
Sbjct: 67   TLWIGDLQYWMDENYIFNCFAHT-GEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQ 125

Query: 836  DMNGMFCSSRPMRIGPATNKKTVGGQQQFPKATYQNTDATQNENDPNNTTIFVGGLDSIV 657
              NG   ++ P             G Q F +  + +    + ++ P + TIFVG L   V
Sbjct: 126  TYNG---TAMP------------NGAQNF-RLNWASAGEKRQDDSP-DYTIFVGDLAGDV 168

Query: 656  TDDLLRQVF-SQFGELVHVKIPVG------KRCGFVQFANRACANEALLMLNGTSLGGQN 498
            TD +L++ F +++  +   K+ +       K  GFV+F + +    A+  +NG     + 
Sbjct: 169  TDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRP 228

Query: 497  IRLSWGRSPANKQETSAG 444
            +R+     PA  + TS G
Sbjct: 229  MRI----GPAANKNTSGG 242


>ref|XP_002316998.1| predicted protein [Populus trichocarpa] gi|222860063|gb|EEE97610.1|
            predicted protein [Populus trichocarpa]
          Length = 403

 Score =  394 bits (1013), Expect = e-107
 Identities = 198/292 (67%), Positives = 222/292 (76%)
 Frame = -3

Query: 1205 VIRNKQTGQPESYGFIEFATRAAAERVLQTYNGTPMPNTELNFRLNWATLGSGEKRGDDS 1026
            VIRNKQTG PE YGFIEF +RAAAER+LQTYNGTPMPN+E  FRLNWATLG+GE+R DD 
Sbjct: 100  VIRNKQTGYPEGYGFIEFVSRAAAERILQTYNGTPMPNSEQAFRLNWATLGAGERRQDDG 159

Query: 1025 ADYTIFVGDLAADVTDYTLQETFRVSFPSVRGAKVVTDRLTGRSKGYGFVKFADESEQVR 846
             D+T+FVGDLAADV DY LQETFR  +PSV+GAKVVTDR+TGRSKGYGF++FADE+EQ R
Sbjct: 160  PDFTVFVGDLAADVNDYLLQETFRNVYPSVKGAKVVTDRVTGRSKGYGFIRFADENEQRR 219

Query: 845  AMSDMNGMFCSSRPMRIGPATNKKTVGGQQQFPKATYQNTDATQNENDPNNTTIFVGGLD 666
            AM +MNG +CS+RPMRIGPA  KK +   QQ+ KATYQN    Q ENDPNNTTIFVG LD
Sbjct: 220  AMVEMNGQYCSTRPMRIGPAATKKPL--TQQYQKATYQNPQGNQGENDPNNTTIFVGALD 277

Query: 665  SIVTDDLLRQVFSQFGELVHVKIPVGKRCGFVQFANRACANEALLMLNGTSLGGQNIRLS 486
              VTDD LR VFS++GELVHVKIP GKRCGFVQFANR  A +AL MLNGT + GQNIRLS
Sbjct: 278  PSVTDDTLRAVFSKYGELVHVKIPAGKRCGFVQFANRTSAEQALSMLNGTQIAGQNIRLS 337

Query: 485  WGRSPANKQETSAGWVQPQPDPNQWXXXXXXXXXXXXXXXXXXAPPAQDPNM 330
            WGRSP+NK        Q QPD +QW                  A   QDPNM
Sbjct: 338  WGRSPSNK--------QVQPDQSQWNGGGYYGYPQGYDAYGYAAAAPQDPNM 381



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 16/232 (6%)
 Frame = -3

Query: 1064 ATLGSGEKRGDDSADYTIFVGDLAADVTDYTLQETFRVSFPSVRGAKVVTDRLTGRSKGY 885
            A  GSG   GD     ++++GDL   + +  L   F  +   V+ AKV+ ++ TG  +GY
Sbjct: 57   AAAGSG---GDGDEIKSLWIGDLQQWMDENYLLSIFSATGEIVQ-AKVIRNKQTGYPEGY 112

Query: 884  GFVKFADESEQVRAMSDMNG--MFCSSRPMRIGPATNKKTVGGQQQFPKATYQNTDATQN 711
            GF++F   +   R +   NG  M  S +  R+    N  T+G  +             + 
Sbjct: 113  GFIEFVSRAAAERILQTYNGTPMPNSEQAFRL----NWATLGAGE-------------RR 155

Query: 710  ENDPNNTTIFVGGLDSIVTDDLLRQVF-SQFGELVHVKIPV------GKRCGFVQFANRA 552
            ++D  + T+FVG L + V D LL++ F + +  +   K+         K  GF++FA+  
Sbjct: 156  QDDGPDFTVFVGDLAADVNDYLLQETFRNVYPSVKGAKVVTDRVTGRSKGYGFIRFADEN 215

Query: 551  CANEALLMLNGTSLGGQNIRL--SWGRSPANKQETSAGWVQPQ-----PDPN 417
                A++ +NG     + +R+  +  + P  +Q   A +  PQ      DPN
Sbjct: 216  EQRRAMVEMNGQYCSTRPMRIGPAATKKPLTQQYQKATYQNPQGNQGENDPN 267