BLASTX nr result

ID: Cimicifuga21_contig00003181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003181
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD63133.1| senescence-associated protein [Vitis quinquangula...   367   3e-99
emb|CAN83511.1| hypothetical protein VITISV_035079 [Vitis vinifera]   367   4e-99
ref|XP_002271684.1| PREDICTED: uncharacterized protein LOC100243...   362   1e-97
gb|ACF06508.1| senescence-associated protein [Elaeis guineensis]      359   6e-97
gb|ABK23290.1| unknown [Picea sitchensis]                             359   6e-97

>gb|AFD63133.1| senescence-associated protein [Vitis quinquangularis]
          Length = 272

 Score =  367 bits (942), Expect = 3e-99
 Identities = 175/273 (64%), Positives = 201/273 (73%), Gaps = 2/273 (0%)
 Frame = +1

Query: 94  MVRISNNLVGILNFVTFLLSIPILGGGIWLSTRASTDCEKFLEKPIIALGVFLLLVSLAG 273
           M R+SNNLVGILNF+TFLLS+PILG GIWLS RASTDCEKFLEKP+IALGVFL++VSLAG
Sbjct: 1   MFRLSNNLVGILNFITFLLSVPILGAGIWLSHRASTDCEKFLEKPVIALGVFLMVVSLAG 60

Query: 274 LIGACCRISXXXXXXXXXXXXXXXXXXXXTIFAFVVTNKGAGKVVSQRGYKEYKLGDYSN 453
           LIGACCR+S                    TIFAFVVTNKGAG+V+S +GYKEY+LGDYSN
Sbjct: 61  LIGACCRVSWLLWVYLLVMFLLIVLLFCFTIFAFVVTNKGAGEVLSGKGYKEYRLGDYSN 120

Query: 454 WLQKRVNNDKNWKKIRSCLEDSKVCKKLADDVVNENFDSYVKNSLSPLQAGCCNPPTECE 633
           WLQKRVNN KNW +I+SCL+D KVC+ L+ D V E  + +    LSP+Q+GCC P  +C 
Sbjct: 121 WLQKRVNNTKNWNRIKSCLQDGKVCQSLSQDKVGETVEQFYAEQLSPIQSGCCKPSNDCG 180

Query: 634 FTYRNATIWDKPVTAINSTNEDCVTWTNDN--LCFDCGSCKAGVLANLKRDWKKVAVVNX 807
           FTY   T W     A  STN DC +W ND   LCF+C +CKAGVL NLKRDWKKVA++N 
Sbjct: 181 FTYVTPTNWTS-TNAATSTNSDCSSWNNDPSILCFNCQACKAGVLDNLKRDWKKVAIINI 239

Query: 808 XXXXXXXXVYSIGCCAFRNNREDNAYPRWKGYP 906
                   VYSIGCCAFRNNREDNA PRWK YP
Sbjct: 240 IFLVFLIIVYSIGCCAFRNNREDNAQPRWKPYP 272


>emb|CAN83511.1| hypothetical protein VITISV_035079 [Vitis vinifera]
          Length = 272

 Score =  367 bits (941), Expect = 4e-99
 Identities = 175/273 (64%), Positives = 201/273 (73%), Gaps = 2/273 (0%)
 Frame = +1

Query: 94  MVRISNNLVGILNFVTFLLSIPILGGGIWLSTRASTDCEKFLEKPIIALGVFLLLVSLAG 273
           M R+SNNLVGILNF+TFLLS+PILG GIWLS RASTDCEKFLEKP+IALGVFL++VSLAG
Sbjct: 1   MFRLSNNLVGILNFITFLLSVPILGAGIWLSHRASTDCEKFLEKPVIALGVFLMVVSLAG 60

Query: 274 LIGACCRISXXXXXXXXXXXXXXXXXXXXTIFAFVVTNKGAGKVVSQRGYKEYKLGDYSN 453
           LIGACCR+S                    TIFAFVVTNKGAG+V+S +GYKEY+LGDYSN
Sbjct: 61  LIGACCRVSWLLWVYLLVMFLLIVLLFCFTIFAFVVTNKGAGEVLSGKGYKEYRLGDYSN 120

Query: 454 WLQKRVNNDKNWKKIRSCLEDSKVCKKLADDVVNENFDSYVKNSLSPLQAGCCNPPTECE 633
           WLQKRVNN KNW +I+SCL+D KVC+ L+ D V E    +    LSP+Q+GCC P  +C 
Sbjct: 121 WLQKRVNNTKNWNRIKSCLQDGKVCQSLSQDKVGETVQQFYAEQLSPIQSGCCKPSNDCG 180

Query: 634 FTYRNATIWDKPVTAINSTNEDCVTWTND--NLCFDCGSCKAGVLANLKRDWKKVAVVNX 807
           FTY   T W+    A  STN DC +W ND   LCF+C +CKAGVL NLKRDWKKVA++N 
Sbjct: 181 FTYVTPTYWN-TTNAPASTNSDCSSWNNDPNTLCFNCQACKAGVLDNLKRDWKKVAIINI 239

Query: 808 XXXXXXXXVYSIGCCAFRNNREDNAYPRWKGYP 906
                   VYSIGCCAFRNNREDNA PRWK YP
Sbjct: 240 IFLVFLIIVYSIGCCAFRNNREDNAQPRWKPYP 272


>ref|XP_002271684.1| PREDICTED: uncharacterized protein LOC100243286 [Vitis vinifera]
          Length = 272

 Score =  362 bits (928), Expect = 1e-97
 Identities = 173/273 (63%), Positives = 198/273 (72%), Gaps = 2/273 (0%)
 Frame = +1

Query: 94  MVRISNNLVGILNFVTFLLSIPILGGGIWLSTRASTDCEKFLEKPIIALGVFLLLVSLAG 273
           M R+SNNLVGILNF+TFLLS+PILG GIWLS RASTDCEKFLEKP+IALGVFL++VSLAG
Sbjct: 1   MFRLSNNLVGILNFITFLLSVPILGAGIWLSHRASTDCEKFLEKPVIALGVFLMVVSLAG 60

Query: 274 LIGACCRISXXXXXXXXXXXXXXXXXXXXTIFAFVVTNKGAGKVVSQRGYKEYKLGDYSN 453
           LIGACCR+S                    TIFAFVVTNKGAG+V+S +GYKEY+LGDYSN
Sbjct: 61  LIGACCRVSWLLWVYLLVMFLLIVLLFCFTIFAFVVTNKGAGEVLSGKGYKEYRLGDYSN 120

Query: 454 WLQKRVNNDKNWKKIRSCLEDSKVCKKLADDVVNENFDSYVKNSLSPLQAGCCNPPTECE 633
           WLQKRVNN KNW +I+SCL+D KVC+ L+ D V E    +    LSP+Q+GCC P  +C 
Sbjct: 121 WLQKRVNNTKNWNRIKSCLQDGKVCQSLSQDKVGETVQQFYAEQLSPIQSGCCKPSNDCG 180

Query: 634 FTYRNATIWDKPVTAINSTNEDCVTWTNDN--LCFDCGSCKAGVLANLKRDWKKVAVVNX 807
           FTY   T W     A   TN DC  W N+   LCF+C +CKAGVL NLKRDWKKVA++N 
Sbjct: 181 FTYVTPTNWTS-TNAATYTNSDCSLWNNEPSILCFNCQACKAGVLDNLKRDWKKVAIINI 239

Query: 808 XXXXXXXXVYSIGCCAFRNNREDNAYPRWKGYP 906
                   VYSIGCCAFRNNREDNA PRWK YP
Sbjct: 240 IFLVFLIIVYSIGCCAFRNNREDNAQPRWKPYP 272


>gb|ACF06508.1| senescence-associated protein [Elaeis guineensis]
          Length = 270

 Score =  359 bits (922), Expect = 6e-97
 Identities = 167/273 (61%), Positives = 206/273 (75%), Gaps = 2/273 (0%)
 Frame = +1

Query: 94  MVRISNNLVGILNFVTFLLSIPILGGGIWLSTRASTDCEKFLEKPIIALGVFLLLVSLAG 273
           M R+SNNL+GILNF+TFLLSIPI+GGGIWL+TR STDCEKFL+ P+IA+GVFL++VSLAG
Sbjct: 1   MFRVSNNLIGILNFLTFLLSIPIVGGGIWLATRGSTDCEKFLQGPVIAVGVFLMVVSLAG 60

Query: 274 LIGACCRISXXXXXXXXXXXXXXXXXXXXTIFAFVVTNKGAGKVVSQRGYKEYKLGDYSN 453
           L+GACCR++                    T+FAFVVTNKGAG+VVS RGYKEY+LGDYSN
Sbjct: 61  LVGACCRVTWLLWVYLFVMFLLIVLLFCFTVFAFVVTNKGAGEVVSNRGYKEYRLGDYSN 120

Query: 454 WLQKRVNNDKNWKKIRSCLEDSKVCKKLADDVVNENFDSYVKNSLSPLQAGCCNPPTECE 633
           WLQKRVNN K W +I+SC++DSKVC+ L +   N+ F  +  ++LSP+Q+GCC PPTEC 
Sbjct: 121 WLQKRVNNSKTWARIQSCIQDSKVCQSLQEK--NQTFQQFANDNLSPIQSGCCKPPTECN 178

Query: 634 FTYRNATIWDKPVTAINSTNEDCVTWTNDN--LCFDCGSCKAGVLANLKRDWKKVAVVNX 807
           FTY++ T W K  T  NS+N DC  W N+   LC++C SCKAGVLAN+K DWKKVA++N 
Sbjct: 179 FTYQSETSWAKS-TISNSSNPDCNAWDNNPSILCYNCQSCKAGVLANIKNDWKKVAIINI 237

Query: 808 XXXXXXXXVYSIGCCAFRNNREDNAYPRWKGYP 906
                   VYSIGCCAFRNNR D+AY  WKG+P
Sbjct: 238 IVLVFLIVVYSIGCCAFRNNRRDDAYGGWKGHP 270


>gb|ABK23290.1| unknown [Picea sitchensis]
          Length = 269

 Score =  359 bits (922), Expect = 6e-97
 Identities = 170/273 (62%), Positives = 205/273 (75%), Gaps = 2/273 (0%)
 Frame = +1

Query: 94  MVRISNNLVGILNFVTFLLSIPILGGGIWLSTRASTDCEKFLEKPIIALGVFLLLVSLAG 273
           MVR SNN++GILNF+TF+LSIPILGGGIWL+ RASTDCEKFLEKP+IA+GVFL++VS+AG
Sbjct: 1   MVRFSNNVIGILNFITFVLSIPILGGGIWLANRASTDCEKFLEKPVIAIGVFLMVVSIAG 60

Query: 274 LIGACCRISXXXXXXXXXXXXXXXXXXXXTIFAFVVTNKGAGKVVSQRGYKEYKLGDYSN 453
           LIGACCR+S                    T+FAFVVTNKG G+VVS RGYKEY+LGDYSN
Sbjct: 61  LIGACCRVSWLLWVYLLAMFLLIVLLFCFTVFAFVVTNKGVGEVVSNRGYKEYRLGDYSN 120

Query: 454 WLQKRVNNDKNWKKIRSCLEDSKVCKKLADDVVNENFDSYVKNSLSPLQAGCCNPPTECE 633
           WLQKRV N  NWK+IRSC+ D+KVCK LAD+ VN+  D++ K +LSP+Q+GCC PPT C 
Sbjct: 121 WLQKRVENTANWKRIRSCIIDAKVCKSLADESVNKAADAFYKENLSPIQSGCCKPPTSCG 180

Query: 634 FTYRNATIWDKPVTAINSTNEDCVTWTN--DNLCFDCGSCKAGVLANLKRDWKKVAVVNX 807
           FTY +  +W+   TA +++N DC +W N    LC+DC SCKAGVL NLK DW+KVA VN 
Sbjct: 181 FTYVSPIMWNG--TATDTSNTDCNSWNNTQSQLCYDCNSCKAGVLQNLKHDWRKVAAVNI 238

Query: 808 XXXXXXXXVYSIGCCAFRNNREDNAYPRWKGYP 906
                   VYS+GCCAFRNNR DN+Y   KGYP
Sbjct: 239 VMLIFLVIVYSVGCCAFRNNRHDNSY--GKGYP 269


Top