BLASTX nr result

ID: Cimicifuga21_contig00003175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003175
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307616.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002300812.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002520966.1| RNA binding protein, putative [Ricinus commu...    82   6e-14
ref|XP_002463742.1| hypothetical protein SORBIDRAFT_01g005220 [S...    81   1e-13
gb|EAY92179.1| hypothetical protein OsI_13894 [Oryza sativa Indi...    81   1e-13

>ref|XP_002307616.1| predicted protein [Populus trichocarpa] gi|222857065|gb|EEE94612.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/51 (88%), Positives = 49/51 (96%)
 Frame = -1

Query: 316 HAYRLTMRALYASGPLSWEQESLLTNLRLSLHISNEEHLLHLKQLLSAQVL 164
           HAYR T++ALYASGPLSWEQESLLTNLRLSLHIS+EEHLLHL+QLLS QVL
Sbjct: 329 HAYRSTVQALYASGPLSWEQESLLTNLRLSLHISDEEHLLHLRQLLSTQVL 379


>ref|XP_002300812.1| predicted protein [Populus trichocarpa] gi|222842538|gb|EEE80085.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/54 (85%), Positives = 51/54 (94%)
 Frame = -1

Query: 316 HAYRLTMRALYASGPLSWEQESLLTNLRLSLHISNEEHLLHLKQLLSAQVL*SS 155
           HAYR T++ALYASGPLSWEQESLLTNLRLSL+IS+EEHLLHL+QLLS QVL SS
Sbjct: 333 HAYRSTVQALYASGPLSWEQESLLTNLRLSLNISDEEHLLHLRQLLSTQVLQSS 386


>ref|XP_002520966.1| RNA binding protein, putative [Ricinus communis]
           gi|223539803|gb|EEF41383.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = -1

Query: 313 AYRLTMRALYASGPLSWEQESLLTNLRLSLHISNEEHLLHLKQLLS 176
           AY+ T+RALYASGPLSWEQESLLTNLRLSLHIS+EEHLL LK LLS
Sbjct: 337 AYKSTVRALYASGPLSWEQESLLTNLRLSLHISDEEHLLQLKHLLS 382


>ref|XP_002463742.1| hypothetical protein SORBIDRAFT_01g005220 [Sorghum bicolor]
           gi|241917596|gb|EER90740.1| hypothetical protein
           SORBIDRAFT_01g005220 [Sorghum bicolor]
          Length = 307

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/47 (82%), Positives = 45/47 (95%)
 Frame = -1

Query: 313 AYRLTMRALYASGPLSWEQESLLTNLRLSLHISNEEHLLHLKQLLSA 173
           AYR TMRALYASGPL+WEQE+LLTNLRLSL+ISNEEHLL L++LLS+
Sbjct: 261 AYRSTMRALYASGPLTWEQEALLTNLRLSLNISNEEHLLQLRRLLSS 307


>gb|EAY92179.1| hypothetical protein OsI_13894 [Oryza sativa Indica Group]
          Length = 817

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/48 (81%), Positives = 46/48 (95%)
 Frame = -1

Query: 313 AYRLTMRALYASGPLSWEQESLLTNLRLSLHISNEEHLLHLKQLLSAQ 170
           AY+ TMRALYASGPL+WEQESLLTNLRLSL+ISNEEHLL L++LLS++
Sbjct: 770 AYQSTMRALYASGPLTWEQESLLTNLRLSLNISNEEHLLQLRRLLSSR 817


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