BLASTX nr result

ID: Cimicifuga21_contig00003162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003162
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273700.1| PREDICTED: reticulon-like protein B12 [Vitis...   273   7e-71
ref|XP_003520935.1| PREDICTED: reticulon-like protein B12-like [...   248   1e-63
ref|XP_004137740.1| PREDICTED: reticulon-like protein B12-like [...   248   2e-63
ref|XP_003516933.1| PREDICTED: reticulon-like protein B12-like [...   246   5e-63
ref|XP_002323551.1| predicted protein [Populus trichocarpa] gi|2...   243   6e-62

>ref|XP_002273700.1| PREDICTED: reticulon-like protein B12 [Vitis vinifera]
           gi|297740256|emb|CBI30438.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score =  273 bits (697), Expect = 7e-71
 Identities = 133/207 (64%), Positives = 164/207 (79%)
 Frame = +3

Query: 204 SVDRLFYRERTVHQILGEGFIADVMLWRRKDLTVGILMVTLASWVVFEKSGYTXXXXXXX 383
           S DRLF R+RTVHQILG G +ADVMLWR+K+LTVGIL+VTLA+WVVFE SGYT       
Sbjct: 3   SSDRLFNRQRTVHQILGGGLVADVMLWRQKNLTVGILLVTLAAWVVFELSGYTLLSLVSS 62

Query: 384 XXXXXXXXXXXWAKSAEILSRPPPPLPDLQLSEEVVNEAAAFVRSHVNALLSVSQDICLG 563
                      WAKSA IL+RP PPLP+L LSEE+VNE AAF+R+  N LL VSQDI LG
Sbjct: 63  VFLLLVSILFLWAKSAAILNRPAPPLPNLYLSEEIVNEVAAFIRTRTNTLLQVSQDIALG 122

Query: 564 KDSKLFFKVAACMWVTSFVGGWTDFVTLGYTSLLFLLTVPAIYEKYEDQVDRYVIVAYRE 743
           KDS++FFKVAA +W+ S VGG TDF+TLGY SL+ +LTVPA+YE+YED +DRYV++ YR+
Sbjct: 123 KDSRMFFKVAAYLWLISVVGGLTDFLTLGYISLVIVLTVPALYERYEDYIDRYVMMGYRK 182

Query: 744 LKRLYVRLDQECLSKIRNLILEKRKLS 824
           L+ LY++LD+EC+SK++  ILEKRKLS
Sbjct: 183 LQLLYMKLDEECISKVQKWILEKRKLS 209


>ref|XP_003520935.1| PREDICTED: reticulon-like protein B12-like [Glycine max]
          Length = 209

 Score =  248 bits (634), Expect = 1e-63
 Identities = 120/207 (57%), Positives = 157/207 (75%)
 Frame = +3

Query: 204 SVDRLFYRERTVHQILGEGFIADVMLWRRKDLTVGILMVTLASWVVFEKSGYTXXXXXXX 383
           S DRLF R+R++H+ILG G +AD++LWRRK+LTVGIL+VTLA WVVFE+SGYT       
Sbjct: 3   SSDRLFNRQRSLHEILGGGQVADLILWRRKNLTVGILLVTLAVWVVFERSGYTLLSLVSN 62

Query: 384 XXXXXXXXXXXWAKSAEILSRPPPPLPDLQLSEEVVNEAAAFVRSHVNALLSVSQDICLG 563
                      WAKSA IL+RP PPLP L LSEE+ NE   F+R+ VN LLSVSQDI LG
Sbjct: 63  VLLLLIVILFLWAKSAAILNRPAPPLPQLHLSEEMANEVKTFIRTRVNDLLSVSQDIALG 122

Query: 564 KDSKLFFKVAACMWVTSFVGGWTDFVTLGYTSLLFLLTVPAIYEKYEDQVDRYVIVAYRE 743
           KDS+LF KVAA +W+ S +GG TDF+TL YTSL  +LTVPAIYE+YED +D+Y++  YR+
Sbjct: 123 KDSRLFLKVAAYLWIISIIGGLTDFLTLAYTSLFIVLTVPAIYERYEDYIDKYILKGYRK 182

Query: 744 LKRLYVRLDQECLSKIRNLILEKRKLS 824
           L  L+++++++ ++K+ N ILEK+KLS
Sbjct: 183 LCLLHLKINEQYVNKVHNWILEKKKLS 209


>ref|XP_004137740.1| PREDICTED: reticulon-like protein B12-like [Cucumis sativus]
           gi|449483434|ref|XP_004156590.1| PREDICTED:
           reticulon-like protein B12-like [Cucumis sativus]
          Length = 209

 Score =  248 bits (632), Expect = 2e-63
 Identities = 118/207 (57%), Positives = 157/207 (75%)
 Frame = +3

Query: 204 SVDRLFYRERTVHQILGEGFIADVMLWRRKDLTVGILMVTLASWVVFEKSGYTXXXXXXX 383
           S DRLF ++RT+H+I+G G +ADV+LWRRK+LT+GIL++TLA+W+VFE+ GYT       
Sbjct: 3   SSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLISS 62

Query: 384 XXXXXXXXXXXWAKSAEILSRPPPPLPDLQLSEEVVNEAAAFVRSHVNALLSVSQDICLG 563
                      WAKSA IL+RP PPLP+L LSE++VNEAA+F+RS VNA LSV+QDI +G
Sbjct: 63  VLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIAMG 122

Query: 564 KDSKLFFKVAACMWVTSFVGGWTDFVTLGYTSLLFLLTVPAIYEKYEDQVDRYVIVAYRE 743
           KD +LFFKVAAC+W+ S + G TD +TL YTSLL +LT+PA+YEKYED VDR+ I+ Y++
Sbjct: 123 KDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMYKK 182

Query: 744 LKRLYVRLDQECLSKIRNLILEKRKLS 824
           L + YV+LD+  +   +  ILEK KLS
Sbjct: 183 LYQFYVKLDEMRVLTYQQWILEKEKLS 209


>ref|XP_003516933.1| PREDICTED: reticulon-like protein B12-like [Glycine max]
          Length = 209

 Score =  246 bits (629), Expect = 5e-63
 Identities = 122/207 (58%), Positives = 156/207 (75%)
 Frame = +3

Query: 204 SVDRLFYRERTVHQILGEGFIADVMLWRRKDLTVGILMVTLASWVVFEKSGYTXXXXXXX 383
           S DRLF R+R +H+ILG G +AD++LWRRK+LTVGIL+VTL  WVVFE+SGYT       
Sbjct: 3   SFDRLFNRQRGLHEILGGGQVADLILWRRKNLTVGILLVTLGVWVVFERSGYTLLSLISN 62

Query: 384 XXXXXXXXXXXWAKSAEILSRPPPPLPDLQLSEEVVNEAAAFVRSHVNALLSVSQDICLG 563
                      WAKSA+IL+RP PPLP L+LSEE+ NEA  F+ + VN LLSVSQDI LG
Sbjct: 63  VLLLLIVILFLWAKSADILNRPAPPLPQLRLSEEMANEAKTFICTRVNDLLSVSQDIALG 122

Query: 564 KDSKLFFKVAACMWVTSFVGGWTDFVTLGYTSLLFLLTVPAIYEKYEDQVDRYVIVAYRE 743
           KDS+LF KVAA +W+ S +GG TDF+TL YTSLL +LTVPAIYE+YED +D Y++  YR+
Sbjct: 123 KDSRLFLKVAAYLWLISIIGGLTDFLTLAYTSLLLVLTVPAIYERYEDYIDMYILKGYRK 182

Query: 744 LKRLYVRLDQECLSKIRNLILEKRKLS 824
           L  L+V++++  +SK+ N ILEK+KLS
Sbjct: 183 LCLLHVKINEGYVSKVHNWILEKKKLS 209


>ref|XP_002323551.1| predicted protein [Populus trichocarpa] gi|222868181|gb|EEF05312.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  243 bits (620), Expect = 6e-62
 Identities = 116/207 (56%), Positives = 156/207 (75%)
 Frame = +3

Query: 204 SVDRLFYRERTVHQILGEGFIADVMLWRRKDLTVGILMVTLASWVVFEKSGYTXXXXXXX 383
           S  RLF R+RTVH+I G GF+ADV+LWR+ ++T+GIL+VTL+SWVVFE+SGYT       
Sbjct: 3   SSSRLFNRQRTVHEIFGGGFVADVILWRQMNITIGILLVTLSSWVVFERSGYTLLSLVSS 62

Query: 384 XXXXXXXXXXXWAKSAEILSRPPPPLPDLQLSEEVVNEAAAFVRSHVNALLSVSQDICLG 563
                      WAKSA IL+RP PPLP L LSEE V E A+ +R+ +NALLS+SQDI LG
Sbjct: 63  VLLLLAVILFLWAKSAAILNRPAPPLPRLHLSEETVTEVASLIRTRLNALLSISQDIALG 122

Query: 564 KDSKLFFKVAACMWVTSFVGGWTDFVTLGYTSLLFLLTVPAIYEKYEDQVDRYVIVAYRE 743
           KD+KLF KVAA + + S VGG TDF+TLGY SLL +LT+PA+YE+YED +DRY  + +++
Sbjct: 123 KDTKLFLKVAAYLLLISVVGGLTDFLTLGYASLLIVLTIPALYERYEDYIDRYAEMVFKK 182

Query: 744 LKRLYVRLDQECLSKIRNLILEKRKLS 824
             +LY+++D EC+ +++N ILE++KLS
Sbjct: 183 SHQLYLKVDVECIGRVQNWILERQKLS 209


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