BLASTX nr result

ID: Cimicifuga21_contig00003159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003159
         (1311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282339.1| PREDICTED: probable rhamnose biosynthetic en...   555   e-156
ref|XP_002509687.1| NAD dependent epimerase/dehydratase, putativ...   553   e-155
gb|ACJ11713.1| UDP-L-rhamnose synthase [Gossypium hirsutum]           544   e-152
ref|XP_002299567.1| predicted protein [Populus trichocarpa] gi|1...   543   e-152
ref|XP_002303557.1| predicted protein [Populus trichocarpa] gi|1...   541   e-151

>ref|XP_002282339.1| PREDICTED: probable rhamnose biosynthetic enzyme 1 [Vitis vinifera]
          Length = 302

 Score =  555 bits (1430), Expect = e-156
 Identities = 264/298 (88%), Positives = 287/298 (96%)
 Frame = -2

Query: 1214 MGFVSNGSAASDKPLKFLIYGRTGWIGGLLGKLCEAQGIDYTYGSGRLQNRNSLITDLES 1035
            MGF +NG+AASD+ LKFLIYGRTGWIGGLLGKLCEAQG++Y+YGSGRL+NR SL  DL S
Sbjct: 1    MGFPANGAAASDRKLKFLIYGRTGWIGGLLGKLCEAQGLEYSYGSGRLENRASLEADLAS 60

Query: 1034 VQPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFE 855
            V+PTHVFNAAGVTGRPNVDWCESHKVETIRTNV GTLTLADVCR+KGL+LINYATGCIFE
Sbjct: 61   VKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADVCREKGLVLINYATGCIFE 120

Query: 854  YDEKHPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPR 675
            YD  HPLGSG+GFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDL+NPR
Sbjct: 121  YDANHPLGSGVGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPR 180

Query: 674  NFITKISKYEKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILEMYKE 495
            NFITKI++YEKVV+IPNSMTILDELLPIS+EMAKRNLTGIWNFTNPGVVSHNEILEMY++
Sbjct: 181  NFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRD 240

Query: 494  YIEPNFTWKNFTLEEQAKVIVAPRSNNEMDGAKLKKEFPELLSIKESLIQYVFKPNQK 321
            YI+PNF WKNFTLEEQAKVIVAPRSNNE+D +KLKKEFPEL+SIKESLI+YVFKPNQK
Sbjct: 241  YIDPNFAWKNFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLIKYVFKPNQK 298


>ref|XP_002509687.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
            gi|223549586|gb|EEF51074.1| NAD dependent
            epimerase/dehydratase, putative [Ricinus communis]
          Length = 302

 Score =  553 bits (1425), Expect = e-155
 Identities = 262/299 (87%), Positives = 283/299 (94%)
 Frame = -2

Query: 1214 MGFVSNGSAASDKPLKFLIYGRTGWIGGLLGKLCEAQGIDYTYGSGRLQNRNSLITDLES 1035
            MGF SNG+  + KP KFLIYGRTGWIGGLLGKLCE+QGIDYTYG+GRL+NR SL  D+ S
Sbjct: 1    MGFQSNGATDNKKPYKFLIYGRTGWIGGLLGKLCESQGIDYTYGNGRLENRVSLENDIAS 60

Query: 1034 VQPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFE 855
            + PTHVFNAAGVTGRPNVDWCESHKVETIRTNV GTLTLADVCR+KGL+LINYATGCIFE
Sbjct: 61   INPTHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADVCREKGLVLINYATGCIFE 120

Query: 854  YDEKHPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPR 675
            YD+KHPLGSGIGFKEEDTPNFIGSFYSKTKAMVE+LLKNYENVCTLRVRMPISSDL NPR
Sbjct: 121  YDDKHPLGSGIGFKEEDTPNFIGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLANPR 180

Query: 674  NFITKISKYEKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILEMYKE 495
            NFITKI++YEKVVDIPNSMTILDELLPIS+EMAKRNLTGIWNFTNPGVVSHNEILEMY++
Sbjct: 181  NFITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRD 240

Query: 494  YIEPNFTWKNFTLEEQAKVIVAPRSNNEMDGAKLKKEFPELLSIKESLIQYVFKPNQKT 318
            Y++PNFTWKNFTLEEQAKVIVAPRSNNE+D  KL KEFPE+L IKESLI+YVFKPNQKT
Sbjct: 241  YVDPNFTWKNFTLEEQAKVIVAPRSNNELDATKLSKEFPEMLPIKESLIKYVFKPNQKT 299


>gb|ACJ11713.1| UDP-L-rhamnose synthase [Gossypium hirsutum]
          Length = 300

 Score =  544 bits (1401), Expect = e-152
 Identities = 262/299 (87%), Positives = 284/299 (94%)
 Frame = -2

Query: 1214 MGFVSNGSAASDKPLKFLIYGRTGWIGGLLGKLCEAQGIDYTYGSGRLQNRNSLITDLES 1035
            MGF +NGS  SDKPLKFLIYGRTGWIGGLLGKLCE+QGIDY YGSGRL+NR SL +D+ +
Sbjct: 1    MGFPANGS--SDKPLKFLIYGRTGWIGGLLGKLCESQGIDYEYGSGRLENRISLESDIAN 58

Query: 1034 VQPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFE 855
            V+PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFE
Sbjct: 59   VKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFE 118

Query: 854  YDEKHPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPR 675
            YDE H +G+GIGFKEEDTPNFIGSFYSKTKAMVE+LLKNYENVCTLRVRMPISSDL NPR
Sbjct: 119  YDEAHQIGTGIGFKEEDTPNFIGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLANPR 178

Query: 674  NFITKISKYEKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILEMYKE 495
            NFITKI++Y+KVV+IPNSMTILDELLPIS+EM KRNLTGIWNFTNPGVVSHNEILEMY++
Sbjct: 179  NFITKITRYDKVVNIPNSMTILDELLPISIEMGKRNLTGIWNFTNPGVVSHNEILEMYRD 238

Query: 494  YIEPNFTWKNFTLEEQAKVIVAPRSNNEMDGAKLKKEFPELLSIKESLIQYVFKPNQKT 318
            YI+PNFTWKNF LEEQAKVIVAPRSNNE+D  KLK EFPELLSIKESLI+YVF+PN+KT
Sbjct: 239  YIDPNFTWKNFNLEEQAKVIVAPRSNNELDATKLKTEFPELLSIKESLIKYVFEPNKKT 297


>ref|XP_002299567.1| predicted protein [Populus trichocarpa] gi|118484571|gb|ABK94159.1|
            unknown [Populus trichocarpa] gi|222846825|gb|EEE84372.1|
            predicted protein [Populus trichocarpa]
          Length = 302

 Score =  543 bits (1400), Expect = e-152
 Identities = 262/299 (87%), Positives = 283/299 (94%)
 Frame = -2

Query: 1214 MGFVSNGSAASDKPLKFLIYGRTGWIGGLLGKLCEAQGIDYTYGSGRLQNRNSLITDLES 1035
            MGF S+   AS K LKFLIYGRTGWIGGLLGKLC++QGID+TYGSGRL+NR SL  DL +
Sbjct: 1    MGFESSNGTASPKLLKFLIYGRTGWIGGLLGKLCQSQGIDFTYGSGRLENRPSLEADLVA 60

Query: 1034 VQPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFE 855
            V PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLAD+CR+KGL+LINYATGCIFE
Sbjct: 61   VNPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADLCREKGLVLINYATGCIFE 120

Query: 854  YDEKHPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPR 675
            YD  HPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLL+NYENVCTLRVRMPISSDL NPR
Sbjct: 121  YDSSHPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLRNYENVCTLRVRMPISSDLANPR 180

Query: 674  NFITKISKYEKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILEMYKE 495
            NFITKI++YEKVVDIPNSMTILDELLPIS+EMAKRNLTGI+NFTNPGVVSHNEILEMY++
Sbjct: 181  NFITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRD 240

Query: 494  YIEPNFTWKNFTLEEQAKVIVAPRSNNEMDGAKLKKEFPELLSIKESLIQYVFKPNQKT 318
            YI+P+FTWKNFTLEEQAKVIVAPRSNNE+D AKLK+EFPELL IKESLI+YVFKPNQKT
Sbjct: 241  YIDPDFTWKNFTLEEQAKVIVAPRSNNELDTAKLKQEFPELLPIKESLIKYVFKPNQKT 299


>ref|XP_002303557.1| predicted protein [Populus trichocarpa] gi|118484773|gb|ABK94255.1|
            unknown [Populus trichocarpa] gi|222840989|gb|EEE78536.1|
            predicted protein [Populus trichocarpa]
          Length = 302

 Score =  541 bits (1393), Expect = e-151
 Identities = 259/299 (86%), Positives = 281/299 (93%)
 Frame = -2

Query: 1214 MGFVSNGSAASDKPLKFLIYGRTGWIGGLLGKLCEAQGIDYTYGSGRLQNRNSLITDLES 1035
            MGF ++   AS KPLKFLIYGRTGWIGGLLGKLC++QGID+TYGSGRL+NR SL  D+ +
Sbjct: 1    MGFETSNGTASTKPLKFLIYGRTGWIGGLLGKLCQSQGIDFTYGSGRLENRPSLEADVAA 60

Query: 1034 VQPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFE 855
            V PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCR+KGL+LINYATGCIFE
Sbjct: 61   VNPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCREKGLVLINYATGCIFE 120

Query: 854  YDEKHPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPR 675
            YD  HPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLL+NYENVCTLRVRMPIS DL NPR
Sbjct: 121  YDSSHPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLRNYENVCTLRVRMPISCDLANPR 180

Query: 674  NFITKISKYEKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILEMYKE 495
            NFITKI++YEKVV+IPNSMTILDELLPIS+EMAKRNLTGI+NFTNPGVVSHNEILEMY++
Sbjct: 181  NFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRD 240

Query: 494  YIEPNFTWKNFTLEEQAKVIVAPRSNNEMDGAKLKKEFPELLSIKESLIQYVFKPNQKT 318
            YI+P FTWKNFTLEEQAKVIVAPRSNNE+D  KLK+EFPELL IKESLI+YVFKPNQKT
Sbjct: 241  YIDPKFTWKNFTLEEQAKVIVAPRSNNELDTVKLKQEFPELLPIKESLIKYVFKPNQKT 299


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