BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003153
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38032.3| unnamed protein product [Vitis vinifera]              254   1e-65
ref|XP_003529680.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   249   4e-64
emb|CBI18352.3| unnamed protein product [Vitis vinifera]              246   5e-63
gb|ACN26564.1| unknown [Zea mays] gi|413933312|gb|AFW67863.1| pu...   217   2e-54
ref|XP_003560754.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   217   2e-54

>emb|CBI38032.3| unnamed protein product [Vitis vinifera]
          Length = 797

 Score =  254 bits (650), Expect = 1e-65
 Identities = 154/305 (50%), Positives = 194/305 (63%), Gaps = 66/305 (21%)
 Frame = +2

Query: 23  QNSSSTSAMNRSIR----------ATDTTKPVFLTKAQRQR----QRHEEEKAAGAEQRR 160
           ++ ++ +AM RSI           AT+  KPVFLTKAQR++    +RHEE     AEQ+R
Sbjct: 39  EDDAAAAAMKRSIEEDISTTIVSAATNMKKPVFLTKAQREQLALQRRHEEI----AEQKR 94

Query: 161 RSDQLLPQ--------NQHNSST-KPSY-----------------------------SDR 226
           R++Q L Q        + H +ST KPS                              S+R
Sbjct: 95  RAEQQLLQARSSSGNHSSHAASTNKPSDPSLDSRHHRSSRDRDRDRDRDRDRDRDRDSER 154

Query: 227 LNHKRDREEENQPHKRVRLEKQA------ELDAIRDQYLGATEKPKKRVIKPSDKFRFSF 388
            N  R+REEE +  +R R EK A      EL++I++QYLG+ +KPKKRVIKPS+KFRFSF
Sbjct: 155 RNRDREREEEAKVRERARSEKLADREREKELESIKEQYLGS-KKPKKRVIKPSEKFRFSF 213

Query: 389 DWDNTQDTSRDMNSLYQNTHQXXXXXXXXXXXXMDRREQKKKLA--------VRVDRHWS 544
           DW+NT+DTSRDMNSLYQN H+            MDR +++K+ A        +RVDRHW+
Sbjct: 214 DWENTEDTSRDMNSLYQNPHEAQLLFGRGFRAGMDRPQRQKEQAAELYDTFDMRVDRHWT 273

Query: 545 KKKLEEMNERDWRIFKEDFDISYKGSRIPNPMRSWGESKLTTELLKAVEKVGYKTPSPIQ 724
           +KKLEEM ERDWRIF+EDF+ISYKGS+IP PMRSW ESKL+TELLKAVE+ GYKTPSPIQ
Sbjct: 274 EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWVESKLSTELLKAVERAGYKTPSPIQ 333

Query: 725 MAAIP 739
           MAAIP
Sbjct: 334 MAAIP 338


>ref|XP_003529680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Glycine
           max]
          Length = 701

 Score =  249 bits (636), Expect = 4e-64
 Identities = 143/301 (47%), Positives = 174/301 (57%), Gaps = 79/301 (26%)
 Frame = +2

Query: 74  TTKPVFLTKAQRQRQRHEEEKAAGAEQRRRSDQLLPQNQHNSSTKPSYSDR--------- 226
           T KPVFLTKAQR++   +      A+Q+RR +QLL +N  +   +    DR         
Sbjct: 14  TAKPVFLTKAQREQLALQRRHEDVADQKRRQEQLLSRNHSSDRDRDRERDRDHRDRDRDR 73

Query: 227 ------------------------LNHKRDREEENQPHKRVRLEK------QAELDAIRD 316
                                    N +R+REEE +  +R RLEK      + EL++I++
Sbjct: 74  DRDRDRDRERERERARDRDREAERRNREREREEETRSRERARLEKLVEREREKELESIKE 133

Query: 317 QYLGATEKPKKRVIKPSDKFRFSFDWDNTQDTSRDMNSLYQNTHQXXXXXXXXXXXXMDR 496
           QYLG+ +KPKKRVIKPS+KFRFSFDW+NT+DTSRDMNSLYQN H+            MDR
Sbjct: 134 QYLGS-KKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSLYQNPHEAQLLFGRGFRAGMDR 192

Query: 497 REQKKKLA----------------------------------------VRVDRHWSKKKL 556
           REQKK  A                                        +RVDRHWS+KKL
Sbjct: 193 REQKKLAAKNEKDMRDQIRKKDGIEEKPEEADAQRRKEAAADLYDTFDMRVDRHWSEKKL 252

Query: 557 EEMNERDWRIFKEDFDISYKGSRIPNPMRSWGESKLTTELLKAVEKVGYKTPSPIQMAAI 736
           EEM ERDWRIF+ED++ISYKGS+IP PMRSW ESKLT+ELLKAVEK GYKTPSPIQMAAI
Sbjct: 253 EEMTERDWRIFREDYNISYKGSKIPRPMRSWNESKLTSELLKAVEKAGYKTPSPIQMAAI 312

Query: 737 P 739
           P
Sbjct: 313 P 313


>emb|CBI18352.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  246 bits (627), Expect = 5e-63
 Identities = 135/243 (55%), Positives = 167/243 (68%), Gaps = 23/243 (9%)
 Frame = +2

Query: 80  KPVFLTKAQRQRQRHEEEKAAGAEQRRRSDQLLPQNQHNSST---------KPSYSDRLN 232
           KPVFLTKAQR++   +  +   AEQ+R     L    H SS          +   S+R N
Sbjct: 3   KPVFLTKAQREQLALQRRQEEIAEQKRYPS--LDSRHHRSSRDRDRDRDRDRDRDSERRN 60

Query: 233 HKRDREEENQPHKRVRLEKQAE------LDAIRDQYLGATEKPKKRVIKPSDKFRFSFDW 394
             R+REEE +     RLEK AE      L++I++QYLG+ +KPKKRVIKPS+KFRFSFDW
Sbjct: 61  RDREREEEAKVRGLARLEKLAEREREKELESIKEQYLGS-KKPKKRVIKPSEKFRFSFDW 119

Query: 395 DNTQDTSRDMNSLYQNTHQXXXXXXXXXXXXMDRREQKKKLA--------VRVDRHWSKK 550
           +NT+DTSRDMNSLYQN H+            MDR +++K+ A        +RVDRHW++K
Sbjct: 120 ENTEDTSRDMNSLYQNPHEAQLLFGRGFRAGMDRPQRQKEQAAELYDTFDMRVDRHWTEK 179

Query: 551 KLEEMNERDWRIFKEDFDISYKGSRIPNPMRSWGESKLTTELLKAVEKVGYKTPSPIQMA 730
           KLEEM ERDWRIF+EDF++SYKGS+IP PMRSW ESKL+ ELLKAVE+ GYKTPSPIQMA
Sbjct: 180 KLEEMTERDWRIFREDFNVSYKGSKIPRPMRSWVESKLSPELLKAVERAGYKTPSPIQMA 239

Query: 731 AIP 739
           AIP
Sbjct: 240 AIP 242


>gb|ACN26564.1| unknown [Zea mays] gi|413933312|gb|AFW67863.1| putative DEAD-box
           ATP-dependent RNA helicase family protein [Zea mays]
          Length = 734

 Score =  217 bits (553), Expect = 2e-54
 Identities = 124/261 (47%), Positives = 159/261 (60%), Gaps = 50/261 (19%)
 Frame = +2

Query: 107 RQRQRHEEEKAAGAEQRRRSDQLLPQNQHNSSTKPSYSDRLNHKRDREEENQ----PHKR 274
           R+R+R ++ +    ++ R  D+   +++ +SS +    DR +  RDR+ +        +R
Sbjct: 89  RERRRDDDSRR---DRYRDRDRDRDRDRDDSSRRDRDRDRRDRDRDRDRDRDRDRGDRER 145

Query: 275 VRLEKQAE------LDAIRDQYLGATEKPKKRVIKPSDKFRFSFDWDNTQDTSRDMNSLY 436
            RLEK AE      LDAI++QYLG+ +KPKKRVIKPS+KFRFSFDW+NT+DTSRDMN+LY
Sbjct: 146 DRLEKIAEREREKELDAIKEQYLGS-KKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALY 204

Query: 437 QNTHQXXXXXXXXXXXXMDRREQKKKLAV------------------------------- 523
           Q+ H+            +DRREQKK  AV                               
Sbjct: 205 QSPHEARLLFGRGFLAGIDRREQKKAAAVHEKETRAELRRKAGVEDRPEDDAVDKKKAAA 264

Query: 524 ---------RVDRHWSKKKLEEMNERDWRIFKEDFDISYKGSRIPNPMRSWGESKLTTEL 676
                    RVDRHWS+K LEEM ERDWRIF+EDF+ISYKGSRIP PMR W ESKL TEL
Sbjct: 265 AEIYDAFDMRVDRHWSEKTLEEMTERDWRIFREDFNISYKGSRIPRPMRKWSESKLGTEL 324

Query: 677 LKAVEKVGYKTPSPIQMAAIP 739
           L+A++K GY+ PSPIQMAAIP
Sbjct: 325 LRAIDKAGYEKPSPIQMAAIP 345


>ref|XP_003560754.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
           [Brachypodium distachyon]
           gi|357118015|ref|XP_003560755.1| PREDICTED: DEAD-box
           ATP-dependent RNA helicase 21-like isoform 2
           [Brachypodium distachyon]
          Length = 734

 Score =  217 bits (552), Expect = 2e-54
 Identities = 125/290 (43%), Positives = 167/290 (57%), Gaps = 46/290 (15%)
 Frame = +2

Query: 8   SPTKFQNSSSTSAMNRSIRATDTTKPVFLTKAQRQRQRHEEEKAAGAEQRRRSDQLLPQN 187
           +P +  +SS   A +R  R  D  +     + + + +R +++     ++ R  D+   + 
Sbjct: 58  NPPRDSSSSHREASDRD-RDRDRDRERDRDRDRDRDRRRDDDSRRDRDRDRDRDRDRDEP 116

Query: 188 QHNSSTKPSYSDRLNHKRDREEENQPHKRVRLEKQAE------LDAIRDQYLGATEKPKK 349
                 +    DR +  R+R E ++  ++ RLEK AE      L+AI++QYLG+ +KPKK
Sbjct: 117 SRRDRDRDRDRDREHRDRERGERDKDREKDRLEKMAEREREKELEAIKEQYLGS-KKPKK 175

Query: 350 RVIKPSDKFRFSFDWDNTQDTSRDMNSLYQNTHQXXXXXXXXXXXXMDRREQKKKLAV-- 523
           RVIKPS+KFRFSFDW+NT+DTSRDMN+LYQ  H+            +DRREQKK  AV  
Sbjct: 176 RVIKPSEKFRFSFDWENTEDTSRDMNALYQTPHEARLLYGRGFLAGIDRREQKKAAAVFE 235

Query: 524 --------------------------------------RVDRHWSKKKLEEMNERDWRIF 589
                                                 RVDRHWS+K +EEM ERDWRIF
Sbjct: 236 KETRAEQRRKFGVEDRPEDDVADKKKAAAAEMYDAFDMRVDRHWSEKGIEEMTERDWRIF 295

Query: 590 KEDFDISYKGSRIPNPMRSWGESKLTTELLKAVEKVGYKTPSPIQMAAIP 739
           +EDF+ISYKGSRIP PMR+W ESKL  ELL+A++KVGYK PSPIQMAAIP
Sbjct: 296 REDFNISYKGSRIPRPMRNWPESKLGAELLRAIDKVGYKKPSPIQMAAIP 345