BLASTX nr result

ID: Cimicifuga21_contig00003117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003117
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46999.1| unknown [Lotus japonicus]                              251   1e-64
ref|XP_002331044.1| predicted protein [Populus trichocarpa] gi|2...   245   1e-62
ref|XP_002532339.1| protein translocase, putative [Ricinus commu...   244   1e-62
ref|XP_004136578.1| PREDICTED: outer envelope pore protein 16-3,...   243   4e-62
ref|NP_001236744.1| uncharacterized protein LOC100499840 [Glycin...   243   4e-62

>gb|AFK46999.1| unknown [Lotus japonicus]
          Length = 162

 Score =  251 bits (642), Expect = 1e-64
 Identities = 121/156 (77%), Positives = 142/156 (91%)
 Frame = -1

Query: 718 MERSELRYLEDDETPIMKTIKGATTGLVAGTIWGTVVATWHDVPRVERSVALPGLIRTLK 539
           ++ +ELRYLE+D++ +MKTIKGATTGLVAGTIWGTVVATW+DVPRVER+VALPGLIRT K
Sbjct: 4   IDPAELRYLENDDSSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTFK 63

Query: 538 MMGSHGLSFAALGGVYIGVEQLVQNYRGKRDFINGTVGAFAAGASVIGFKARSIPTALSA 359
           MMG+HGL+FAA+GGVYIGVEQLVQN+RGKRD +NG VG F AGA+++G+K RSI TALSA
Sbjct: 64  MMGNHGLTFAAIGGVYIGVEQLVQNFRGKRDLVNGAVGGFVAGAAILGYKGRSISTALSA 123

Query: 358 GAALAFTSAVLDIGGQQTKVDVGKEYSAYTTEKRPS 251
           G+ALAFTSAVLD GGQ  K D GKEY+AYTT+KRPS
Sbjct: 124 GSALAFTSAVLDFGGQTMKHDDGKEYAAYTTKKRPS 159


>ref|XP_002331044.1| predicted protein [Populus trichocarpa] gi|222872974|gb|EEF10105.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  245 bits (625), Expect = 1e-62
 Identities = 114/154 (74%), Positives = 139/154 (90%)
 Frame = -1

Query: 718 MERSELRYLEDDETPIMKTIKGATTGLVAGTIWGTVVATWHDVPRVERSVALPGLIRTLK 539
           M+ SE+RYLEDD+TP+MKTIKGAT GLV+GTIWGT+VATWHDVPRVE+SVALPGLIRT+K
Sbjct: 1   MDPSEMRYLEDDDTPMMKTIKGATMGLVSGTIWGTIVATWHDVPRVEKSVALPGLIRTIK 60

Query: 538 MMGSHGLSFAALGGVYIGVEQLVQNYRGKRDFINGTVGAFAAGASVIGFKARSIPTALSA 359
           MMG+HG++FAA+GGVYIGVEQLVQ+YR KRDFING VG F AG++++GFK R+I  A++A
Sbjct: 61  MMGNHGVTFAAIGGVYIGVEQLVQHYRMKRDFINGAVGGFVAGSTILGFKGRNIKNAIAA 120

Query: 358 GAALAFTSAVLDIGGQQTKVDVGKEYSAYTTEKR 257
           GAALA TSA++D GGQ T++D GKEY  YTT+KR
Sbjct: 121 GAALAVTSAIIDAGGQTTRMDTGKEYYPYTTKKR 154


>ref|XP_002532339.1| protein translocase, putative [Ricinus communis]
           gi|223527956|gb|EEF30041.1| protein translocase,
           putative [Ricinus communis]
          Length = 159

 Score =  244 bits (624), Expect = 1e-62
 Identities = 117/154 (75%), Positives = 138/154 (89%)
 Frame = -1

Query: 718 MERSELRYLEDDETPIMKTIKGATTGLVAGTIWGTVVATWHDVPRVERSVALPGLIRTLK 539
           M+ SELRYLED++TP MKTIKGAT GL AGT+WGT+VATWHDVPRVE+ VALPGLIRT+K
Sbjct: 1   MDPSELRYLEDNDTPTMKTIKGATMGLAAGTLWGTIVATWHDVPRVEKHVALPGLIRTVK 60

Query: 538 MMGSHGLSFAALGGVYIGVEQLVQNYRGKRDFINGTVGAFAAGASVIGFKARSIPTALSA 359
           MMG++GL+FAA+GGVYIGVEQL+Q++R KRDF+NGTVG F AGASVIGFK RSI TA+SA
Sbjct: 61  MMGNYGLTFAAIGGVYIGVEQLIQHFRMKRDFVNGTVGGFVAGASVIGFKGRSISTAMSA 120

Query: 358 GAALAFTSAVLDIGGQQTKVDVGKEYSAYTTEKR 257
           GAALA TSA++D GGQ T++D GKEY  YTT+KR
Sbjct: 121 GAALAVTSALIDAGGQTTRIDNGKEYYPYTTKKR 154


>ref|XP_004136578.1| PREDICTED: outer envelope pore protein 16-3,
           chloroplastic/mitochondrial-like [Cucumis sativus]
           gi|449501899|ref|XP_004161489.1| PREDICTED: outer
           envelope pore protein 16-3,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 158

 Score =  243 bits (620), Expect = 4e-62
 Identities = 115/154 (74%), Positives = 139/154 (90%)
 Frame = -1

Query: 718 MERSELRYLEDDETPIMKTIKGATTGLVAGTIWGTVVATWHDVPRVERSVALPGLIRTLK 539
           M+ SE RYLEDD+T +MKTIKGAT G V+GTI+GT+VATWHDVPRVER+VALPGL+RTLK
Sbjct: 1   MDASERRYLEDDDTSLMKTIKGATMGFVSGTIFGTIVATWHDVPRVERNVALPGLVRTLK 60

Query: 538 MMGSHGLSFAALGGVYIGVEQLVQNYRGKRDFINGTVGAFAAGASVIGFKARSIPTALSA 359
           +MG++G++FAA+GGVYIGVEQL+QNYR KRDF+NG VG F AGASV+G+K +SI TALSA
Sbjct: 61  IMGNYGMTFAAIGGVYIGVEQLLQNYRMKRDFVNGAVGGFTAGASVLGYKGKSISTALSA 120

Query: 358 GAALAFTSAVLDIGGQQTKVDVGKEYSAYTTEKR 257
           GAALAFTS+V+DIGGQ T++D GKEY  YTT+KR
Sbjct: 121 GAALAFTSSVIDIGGQTTRIDTGKEYYPYTTKKR 154


>ref|NP_001236744.1| uncharacterized protein LOC100499840 [Glycine max]
           gi|255627053|gb|ACU13871.1| unknown [Glycine max]
          Length = 160

 Score =  243 bits (620), Expect = 4e-62
 Identities = 117/157 (74%), Positives = 139/157 (88%)
 Frame = -1

Query: 718 MERSELRYLEDDETPIMKTIKGATTGLVAGTIWGTVVATWHDVPRVERSVALPGLIRTLK 539
           ++ +E RYLEDD++ +MKTIKGATTGLVAGTIWGTVVATW+DVPRVER+VALPGLIRT K
Sbjct: 2   VDAAERRYLEDDDSSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTFK 61

Query: 538 MMGSHGLSFAALGGVYIGVEQLVQNYRGKRDFINGTVGAFAAGASVIGFKARSIPTALSA 359
           MMG++GL+FAA+GGVYIGVEQLVQNYR KRD +NG VG F AGA+++G++ RSI TALSA
Sbjct: 62  MMGNYGLTFAAIGGVYIGVEQLVQNYRMKRDLVNGAVGGFVAGATILGYRGRSIKTALSA 121

Query: 358 GAALAFTSAVLDIGGQQTKVDVGKEYSAYTTEKRPSS 248
           G+ALAFTSA LD G Q  K D GKEY+AYTT+KRPS+
Sbjct: 122 GSALAFTSAFLDFGDQTIKHDTGKEYAAYTTKKRPST 158


Top