BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003103
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]    73   2e-20
ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-20
ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containi...    64   9e-20
ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat...    64   9e-20
gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossyp...    70   1e-19

>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score = 72.8 bits (177), Expect(2) = 2e-20
 Identities = 31/44 (70%), Positives = 39/44 (88%)
 Frame = -2

Query: 351 VWGALLSACRVYHNVEIGEIAAEHLFEMEPEKAGNYVLLANIYA 220
           VWGALLS+CRV++NV +GE+AAE LFE+EP   GNY+LL+NIYA
Sbjct: 557 VWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYA 600



 Score = 51.2 bits (121), Expect(2) = 2e-20
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
 Frame = -1

Query: 208 WKEVAVVRSLVKSSGTKKEPRCSWIEIGGRTHQLLIGN-VHDHLLDII--IQVLYGDLVA 38
           W EV  VR ++K+ G +K P CSWIE+  + H LL G+  H  +  II  +  L  ++  
Sbjct: 605 WNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKK 664

Query: 37  EGYYPSI 17
            GY+P I
Sbjct: 665 LGYFPEI 671


>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score = 72.8 bits (177), Expect(2) = 2e-20
 Identities = 31/44 (70%), Positives = 39/44 (88%)
 Frame = -2

Query: 351 VWGALLSACRVYHNVEIGEIAAEHLFEMEPEKAGNYVLLANIYA 220
           VWGALLS+CRV++NV +GE+AAE LFE+EP   GNY+LL+NIYA
Sbjct: 557 VWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYA 600



 Score = 51.2 bits (121), Expect(2) = 2e-20
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
 Frame = -1

Query: 208 WKEVAVVRSLVKSSGTKKEPRCSWIEIGGRTHQLLIGN-VHDHLLDII--IQVLYGDLVA 38
           W EV  VR ++K+ G +K P CSWIE+  + H LL G+  H  +  II  +  L  ++  
Sbjct: 605 WNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKK 664

Query: 37  EGYYPSI 17
            GY+P I
Sbjct: 665 LGYFPEI 671


>ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score = 63.9 bits (154), Expect(2) = 9e-20
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = -2

Query: 351 VWGALLSACRVYHNVEIGEIAAEHLFEMEPEKAGNYVLLANIYAKA 214
           +WG+LL+ACR + N+E+ E AA  LF +EPE  GNYVLL+N+YA+A
Sbjct: 478 IWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEA 523



 Score = 57.8 bits (138), Expect(2) = 9e-20
 Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = -1

Query: 211 KWKEVAVVRSLVKSSGTKKEPRCSWIEIGGRTHQLLIGNV-HDHLLDI--IIQVLYGDLV 41
           +W+EV  +R++VKS GTKK P CSWIEI G+ H  L G+  H    +I   ++ L   + 
Sbjct: 525 RWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMK 584

Query: 40  AEGYYPSIEH 11
           A GY+P   +
Sbjct: 585 AAGYFPDTSY 594


>ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score = 63.9 bits (154), Expect(2) = 9e-20
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = -2

Query: 351 VWGALLSACRVYHNVEIGEIAAEHLFEMEPEKAGNYVLLANIYAKA 214
           +WG+LL+ACR + N+E+ E AA  LF +EPE  GNYVLL+N+YA+A
Sbjct: 441 IWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEA 486



 Score = 57.8 bits (138), Expect(2) = 9e-20
 Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = -1

Query: 211 KWKEVAVVRSLVKSSGTKKEPRCSWIEIGGRTHQLLIGNV-HDHLLDI--IIQVLYGDLV 41
           +W+EV  +R++VKS GTKK P CSWIEI G+ H  L G+  H    +I   ++ L   + 
Sbjct: 488 RWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMK 547

Query: 40  AEGYYPSIEH 11
           A GY+P   +
Sbjct: 548 AAGYFPDTSY 557


>gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score = 70.5 bits (171), Expect(2) = 1e-19
 Identities = 29/47 (61%), Positives = 38/47 (80%)
 Frame = -2

Query: 351 VWGALLSACRVYHNVEIGEIAAEHLFEMEPEKAGNYVLLANIYAKAQ 211
           +WGALL  CR+YH++E+ E  AE +FE+EPE  G YVLLANIYA+A+
Sbjct: 465 IWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAE 511



 Score = 50.4 bits (119), Expect(2) = 1e-19
 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
 Frame = -1

Query: 211 KWKEVAVVRSLVKSSGTKKEPRCSWIEIGGRTHQLLIGN----VHDHLLDIIIQVLYGDL 44
           KW+EV  +R  +   G +K P CSWIEI GR +  + GN     H   ++ +++ +   +
Sbjct: 512 KWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKM 571

Query: 43  VAEGYYPSIEH 11
             EGY+P  ++
Sbjct: 572 KEEGYFPKTKY 582