BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003096
         (1917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Sela...    82   6e-17
ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Sela...    82   2e-16
ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-16
ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [S...    83   4e-16
sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large...    83   4e-16

>ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
            gi|300140455|gb|EFJ07178.1| hypothetical protein
            SELMODRAFT_161898 [Selaginella moellendorffii]
          Length = 420

 Score = 82.0 bits (201), Expect(2) = 6e-17
 Identities = 35/63 (55%), Positives = 54/63 (85%)
 Frame = +2

Query: 1397 EAILSVYINEEKSFAILEMRSVELATDAMALDGILFQETALTIRRPGDYNPGLAASLEPA 1576
            +A+++VYIN+EK FA +EMR+VE A++AMALDGI+F+  ++ +RRP DYNP +AA+L P+
Sbjct: 99   DAVVNVYINQEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSMAATLGPS 158

Query: 1577 RPT 1585
            +P+
Sbjct: 159  QPS 161



 Score = 33.5 bits (75), Expect(2) = 6e-17
 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +3

Query: 1263 FAVTRSSLGISGAGRTMIASQPTQ-ATMHARRVYVGCIPEAVHKE 1394
            FA T++SL       TM A   TQ AT HARRVYVG +P   +++
Sbjct: 33   FAGTQASLLFFAGLPTMPAQAMTQQATRHARRVYVGGLPPLANEQ 77


>ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
            gi|300142484|gb|EFJ09184.1| hypothetical protein
            SELMODRAFT_160385 [Selaginella moellendorffii]
          Length = 421

 Score = 82.0 bits (201), Expect(2) = 2e-16
 Identities = 35/63 (55%), Positives = 54/63 (85%)
 Frame = +2

Query: 1397 EAILSVYINEEKSFAILEMRSVELATDAMALDGILFQETALTIRRPGDYNPGLAASLEPA 1576
            +A+++VYIN+EK FA +EMR+VE A++AMALDGI+F+  ++ +RRP DYNP +AA+L P+
Sbjct: 99   DAVVNVYINQEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSMAATLGPS 158

Query: 1577 RPT 1585
            +P+
Sbjct: 159  QPS 161



 Score = 31.6 bits (70), Expect(2) = 2e-16
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +3

Query: 1263 FAVTRSSLGISGAGRTMIASQPTQ-ATMHARRVYVGCIPEAVHKE 1394
            FA T++ L       TM A   TQ AT HARRVYVG +P   +++
Sbjct: 33   FAGTQARLLFFAGLPTMPAQAMTQQATRHARRVYVGGLPPLANEQ 77


>ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|222836904|gb|EEE75297.1|
            predicted protein [Populus trichocarpa]
          Length = 541

 Score = 83.2 bits (204), Expect(2) = 3e-16
 Identities = 39/70 (55%), Positives = 54/70 (77%)
 Frame = +2

Query: 1397 EAILSVYINEEKSFAILEMRSVELATDAMALDGILFQETALTIRRPGDYNPGLAASLEPA 1576
            +A+++VYIN EK FA +EMRSVE A++AMALDGI+F+   + +RRP DYNP LAA+L P+
Sbjct: 239  DAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPS 298

Query: 1577 RPTKLLEQSS 1606
            +P   L  S+
Sbjct: 299  QPNPNLNLSA 308



 Score = 30.0 bits (66), Expect(2) = 3e-16
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 1314 IASQPTQATMHARRVYVGCIPEAVHKE 1394
            + +   QAT HARRVYVG +P   +++
Sbjct: 191  VQAMTQQATRHARRVYVGGLPPTANEQ 217


>ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
            gi|241935829|gb|EES08974.1| hypothetical protein
            SORBIDRAFT_05g026740 [Sorghum bicolor]
          Length = 545

 Score = 82.8 bits (203), Expect(2) = 4e-16
 Identities = 42/80 (52%), Positives = 60/80 (75%), Gaps = 3/80 (3%)
 Frame = +2

Query: 1397 EAILSVYINEEKSFAILEMRSVELATDAMALDGILFQETALTIRRPGDYNPGLAASLEPA 1576
            +A+L+VYIN +K FA +EMRSVE A++AMALDGI+F+   + +RRP DYNP LAA+L P+
Sbjct: 247  DAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPS 306

Query: 1577 RPTKLLEQSS---TSKSTHG 1627
            +P+  L  ++   T+ ST G
Sbjct: 307  QPSPNLNLAAVGLTAGSTGG 326



 Score = 30.0 bits (66), Expect(2) = 4e-16
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +3

Query: 1332 QATMHARRVYVGCIPEAVHKE 1394
            QAT HARRVYVG +P + +++
Sbjct: 205  QATRHARRVYVGGLPPSANEQ 225


>sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large subunit B; AltName: Full=U2
            auxiliary factor 65 kDa subunit B; AltName: Full=U2 small
            nuclear ribonucleoprotein auxiliary factor large subunit
            B; Short=U2 snRNP auxiliary factor large subunit B
            gi|68036764|gb|AAY84880.1| U2AF large subunit [Triticum
            aestivum]
          Length = 543

 Score = 82.8 bits (203), Expect(2) = 4e-16
 Identities = 39/66 (59%), Positives = 53/66 (80%)
 Frame = +2

Query: 1397 EAILSVYINEEKSFAILEMRSVELATDAMALDGILFQETALTIRRPGDYNPGLAASLEPA 1576
            +A+L+VYIN +K FA +EMRSVE A++AMALDGILF+   + +RRP DYNP LAA+L P+
Sbjct: 243  DAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPS 302

Query: 1577 RPTKLL 1594
            +P+  L
Sbjct: 303  QPSSNL 308



 Score = 30.0 bits (66), Expect(2) = 4e-16
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +3

Query: 1332 QATMHARRVYVGCIPEAVHKE 1394
            QAT HARRVYVG +P + +++
Sbjct: 201  QATRHARRVYVGGLPPSANEQ 221