BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003072
         (1978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   328   2e-87
ref|XP_004165340.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   325   4e-86
ref|XP_002283980.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   325   4e-86
ref|XP_003530912.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   321   4e-85
ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|2...   320   7e-85

>ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
          Length = 336

 Score =  328 bits (842), Expect = 2e-87
 Identities = 172/341 (50%), Positives = 224/341 (65%), Gaps = 22/341 (6%)
 Frame = +2

Query: 155  LQHCLV----TQTTHSSPLTKISLFINRATTTRII-------REQSDD-------RQN-D 277
            L H L+      TT + PLT+ +  +  +   R +          SDD       R+N  
Sbjct: 11   LNHSLLRYPTVSTTFTIPLTRYTTRLISSDRHRPLLADCAEDHSDSDDFSRRSFIRENCS 70

Query: 278  WAKPVIIVDVVWNLAFVLVSIVLLFSTFRECPSTPLRIWIGGYALQCVLHVGFVYVEHXX 457
            ++ P++++DVVWNLAFVLVS+V+LFSTFRE PSTPLR+WI GY LQC+LHVGFV+ E+  
Sbjct: 71   YSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVGFVFFEY-- 128

Query: 458  XXXXXXXXXXEDEENLLNGSSESHGT--SIATRLESMNTIVSFVWWMIGFYWIVVGGQAL 631
                        + ++ +   E      SI  RLESMNT+ S VWW+ GFYWIV+GGQAL
Sbjct: 129  ------------QRSMAHHGFEDRTAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGGQAL 176

Query: 632  LQDAPRLYSLTVVFLAFDVFFAIFCVVLVCLIGIAVFCCLPCIIVVLYSMVVREGASEED 811
            LQD+PRLY LTVVFLAFD+FF +FC+ + C+I  ++ CC+P I+   Y+M  REGASEED
Sbjct: 177  LQDSPRLYWLTVVFLAFDLFFILFCIGMACVIFFSLCCCIP-IVAFAYAMTTREGASEED 235

Query: 812  IRVLPRYKFRQIIEPQVSDMDWKQEVVMEME-SAGDSISEISLLPEDSQCCICLSKYVDG 988
            IR LP+Y FRQ +    +    ++ +   +E      I E++L PEDS+CCICLS+Y DG
Sbjct: 236  IRTLPKYTFRQAVLGTFNLGKEREPIGSTVELDNSHRIKELALHPEDSECCICLSRYEDG 295

Query: 989  VELHSLPCNHHFHCGCIAKWLRINAKCPLCKKNVLGDDDLV 1111
             EL++LPCNHHFHCGCIAKWLRINA CPLCK N+   D LV
Sbjct: 296  TELYTLPCNHHFHCGCIAKWLRINATCPLCKSNIRQGDTLV 336


>ref|XP_004165340.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin protein ligase RIE1-like
            [Cucumis sativus]
          Length = 264

 Score =  325 bits (832), Expect = 4e-86
 Identities = 157/278 (56%), Positives = 199/278 (71%), Gaps = 3/278 (1%)
 Frame = +2

Query: 287  PVIIVDVVWNLAFVLVSIVLLFSTFRECPSTPLRIWIGGYALQCVLHVGFVYVEHXXXXX 466
            P++++DVVWNLAFVLVS+V+LFSTFRE PSTPLR+WI GY LQC+LHVGFV+ E+     
Sbjct: 2    PILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVGFVFFEY----- 56

Query: 467  XXXXXXXEDEENLLNGSSESHGT--SIATRLESMNTIVSFVWWMIGFYWIVVGGQALLQD 640
                     + ++ +   E      SI  RLESMNT+ S VWW+ GFYWIV+GGQALLQD
Sbjct: 57   ---------QRSMAHHGFEDRTAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGGQALLQD 107

Query: 641  APRLYSLTVVFLAFDVFFAIFCVVLVCLIGIAVFCCLPCIIVVLYSMVVREGASEEDIRV 820
            +PRLY LTVVFLAFD+FF +FC+ + C+   ++ CC+P I+   Y+M  REGASEEDIR 
Sbjct: 108  SPRLYWLTVVFLAFDLFFILFCIGMACVXFFSLCCCIP-IVAFAYAMTTREGASEEDIRT 166

Query: 821  LPRYKFRQIIEPQVSDMDWKQEVVMEME-SAGDSISEISLLPEDSQCCICLSKYVDGVEL 997
            LP+Y FRQ +    +    ++ +   +E      I E++L PEDS+CCICLS+Y DG EL
Sbjct: 167  LPKYTFRQAVLGTFNLGKEREPIGSTVELDNSHRIKELALHPEDSECCICLSRYEDGTEL 226

Query: 998  HSLPCNHHFHCGCIAKWLRINAKCPLCKKNVLGDDDLV 1111
            ++LPCNHHFHCGCIAKWLRINA CPLCK N+   D LV
Sbjct: 227  YTLPCNHHFHCGCIAKWLRINATCPLCKSNIRQGDTLV 264


>ref|XP_002283980.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
            vinifera]
          Length = 331

 Score =  325 bits (832), Expect = 4e-86
 Identities = 160/296 (54%), Positives = 207/296 (69%), Gaps = 9/296 (3%)
 Frame = +2

Query: 251  EQSDDRQ--------NDWAKPVIIVDVVWNLAFVLVSIVLLFSTFRECPSTPLRIWIGGY 406
            E  DDR          D++KP++++DV+WNLAFV VS+V+L STF+E PS PLR+WI GY
Sbjct: 54   EDYDDRHMSDGGGGGGDFSKPIVVLDVIWNLAFVSVSMVVLLSTFQERPSRPLRVWIFGY 113

Query: 407  ALQCVLHVGFVYVEHXXXXXXXXXXXXEDEENLLNGSSESHGTSIATRLESMNTIVSFVW 586
            ALQC+LHVGFV  +                    NG+ + H +SI  RLESMNT+ S VW
Sbjct: 114  ALQCLLHVGFVCFQFRRR----------------NGNEDRH-SSIVKRLESMNTMFSSVW 156

Query: 587  WMIGFYWIVVGGQALLQDAPRLYSLTVVFLAFDVFFAIFCVVLVCLIGIAVFCCLPCIIV 766
            W+ GF WI+ GGQ L+QD+PRLY L VVFLAFDVFF +FC+ + C+   A+FCC+P +  
Sbjct: 157  WVFGFCWILAGGQVLMQDSPRLYWLAVVFLAFDVFFMMFCIGMACIFFFALFCCIP-LAA 215

Query: 767  VLYSMVVREGASEEDIRVLPRYKFRQIIEPQVSDMDWKQEVVMEME-SAGDSISEISLLP 943
            + Y+M +REGASE+DIR+LPRY+F      +  D D KQ +   +E  +  SIS+++L P
Sbjct: 216  IAYAMKIREGASEDDIRLLPRYRFCDASLVRKVDDDKKQALEAAVELGSSSSISDLALHP 275

Query: 944  EDSQCCICLSKYVDGVELHSLPCNHHFHCGCIAKWLRINAKCPLCKKNVLGDDDLV 1111
            EDS+CCICLS+YVDG EL+ LPCNHHFHCGCI++WLRINA CPLCK N+L  D LV
Sbjct: 276  EDSECCICLSRYVDGAELYILPCNHHFHCGCISRWLRINATCPLCKFNILRGDMLV 331


>ref|XP_003530912.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 360

 Score =  321 bits (823), Expect = 4e-85
 Identities = 155/332 (46%), Positives = 220/332 (66%), Gaps = 17/332 (5%)
 Frame = +2

Query: 167  LVTQTTHSSPLTKISLFINRATTTRIIREQS----DDRQNDW--AKPVIIVDVVWNLAFV 328
            L+ +   ++ L  ++L + R   + ++RE +    ++R+ DW  +KPV+ +D+ WN+AFV
Sbjct: 15   LLPRPDAAARLPVLALLLGRRGHSVMVRETAARELEERRADWTYSKPVVALDMTWNMAFV 74

Query: 329  LVSIVLLFSTFRECPSTPLRIWIGGYALQCVLHVGFVYVEHXXXXXXXXXXXX------- 487
            +VS V+L  T +E P+TP+R WI GYALQC+LHV  V++E+                   
Sbjct: 75   VVSAVMLACTVKENPNTPIRWWICGYALQCLLHVALVWLEYRRRNDAPGDEDSAANLDYD 134

Query: 488  ---EDEENLLNGSSESHGTSIATRLESMNTIVSFVWWMIGFYWIVVGGQALLQDAPRLYS 658
               + +E+ +  S  S  T    R  S+NT++S +WWM+GFYW+V GG  LLQDAPRLY 
Sbjct: 135  DVNDSDEDDVGTSGSSSSTGFTKRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLYW 194

Query: 659  LTVVFLAFDVFFAIFCVVLVCLIGIAVFCCLPCIIVVLYSMVVREGASEEDIRVLPRYKF 838
            LTVVFLAFDVFFAIFCVVL CLIGIA+ CCLPCII +LY++  +EGASE D+ +LP+Y+F
Sbjct: 195  LTVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASESDLSILPKYRF 254

Query: 839  RQIIEPQVSDMDWKQEVVMEMESAGDSISEISLLPEDSQCCICLSKYVDGVELHSLPCNH 1018
            + +   +         ++    S G S++E +L PED++CCIC+S Y DG ELH LPCNH
Sbjct: 255  QMLSNEETPGEGGGGSMIPMETSNGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNH 314

Query: 1019 HFHCGCIAKWLRINAKCPLCKKNVL-GDDDLV 1111
            HFH  CI KWL++NA CPLCK N+L G++ ++
Sbjct: 315  HFHSTCIVKWLKMNATCPLCKYNILKGNEQII 346


>ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|222852284|gb|EEE89831.1|
            predicted protein [Populus trichocarpa]
          Length = 351

 Score =  320 bits (821), Expect = 7e-85
 Identities = 164/327 (50%), Positives = 218/327 (66%), Gaps = 22/327 (6%)
 Frame = +2

Query: 179  TTHSSPLTKISLFINRATTTR----IIREQS----DDRQNDW--AKPVIIVDVVWNLAFV 328
            T+ +S  T +S  + RAT  R    ++RE +    D+R+ DW  +KPV+ +D++WN AFV
Sbjct: 20   TSPTSRQTTLSALLGRATGRRGPSMLVRETAARELDERRADWGYSKPVVSLDMMWNAAFV 79

Query: 329  LVSIVLLFSTFRECPSTPLRIWIGGYALQCVLHVGFVYVEHXXXXXXXXXXXXE-----D 493
            +VS+ +L  T +E P+TP+RIWI GYALQC++HV  V++E+                  +
Sbjct: 80   VVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLEYRRRNTRRERDIESQQQSTE 139

Query: 494  EENLLNGSSE-------SHGTSIATRLESMNTIVSFVWWMIGFYWIVVGGQALLQDAPRL 652
            EEN+     E       S  +S+  R ES+NT+VSF+WWM+GFYW+V GG  LLQ+AP L
Sbjct: 140  EENVPESDEEDDRASFISPRSSVTKRCESVNTMVSFLWWMVGFYWVVSGGDVLLQNAPHL 199

Query: 653  YSLTVVFLAFDVFFAIFCVVLVCLIGIAVFCCLPCIIVVLYSMVVREGASEEDIRVLPRY 832
            Y L VVFLAFDVFFAIFCVVL CLIGIA+ CCLPCII +LY++  +EGASE D+  LP+Y
Sbjct: 200  YWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLIQLPKY 259

Query: 833  KFRQIIEPQVSDMDWKQEVVMEMESAGDSISEISLLPEDSQCCICLSKYVDGVELHSLPC 1012
            KF+ I   +   ++  + V +E  S       I LLPED++CCICLS Y DG ELH+LPC
Sbjct: 260  KFQMIRNEEKPGIEAGKMVPVETSSRFLGTERI-LLPEDAECCICLSPYEDGAELHALPC 318

Query: 1013 NHHFHCGCIAKWLRINAKCPLCKKNVL 1093
            NHHFH  CI KWL++NA CPLCK N+L
Sbjct: 319  NHHFHATCIVKWLKMNATCPLCKFNIL 345