BLASTX nr result

ID: Cimicifuga21_contig00003068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003068
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532192.1| conserved hypothetical protein [Ricinus comm...   158   2e-36
ref|XP_002310299.1| predicted protein [Populus trichocarpa] gi|2...   149   5e-34
ref|XP_002327764.1| predicted protein [Populus trichocarpa] gi|2...   149   5e-34
ref|XP_002335272.1| predicted protein [Populus trichocarpa] gi|2...   144   2e-32
ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [V...   144   3e-32

>ref|XP_002532192.1| conserved hypothetical protein [Ricinus communis]
           gi|223528124|gb|EEF30195.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 461

 Score =  158 bits (399), Expect = 2e-36
 Identities = 93/208 (44%), Positives = 127/208 (61%), Gaps = 4/208 (1%)
 Frame = +3

Query: 144 DKVQQLPPALDRSAGSSSFCCISRVPGNLVEINNKAYKPEIVSLGPYHYGVAGDHLKMFE 323
           DK+ ++P  L+++AG SS CCI RVP +L +IN KAY+P IVS+GPYH+G   D  +M E
Sbjct: 38  DKISKMPKLLNKTAGKSS-CCIFRVPKSLAQINEKAYQPHIVSIGPYHHG--NDQFQMIE 94

Query: 324 EHKWQYLHTHVTRQNQYMAFHLGEQEQLNRDDLEPYLSHILGLEDEIRQSYSENINLDSD 503
           EHKW++L   +TR          + + ++ DD   +   I   E+EIR+ YSENI   S 
Sbjct: 95  EHKWRFLGAVLTRT---------KAKDISLDD---FFKAIAPKEEEIRECYSENIGYSSH 142

Query: 504 ELAKMMLLDGFFIIEVL----RMVSDDDYDSIFTNQWIIPLLMRDLIKLENQIPFFVLER 671
           +L +MM+LDG FIIE+L    R+V     D IF   W+   LMRDL++LENQIPFFVLE 
Sbjct: 143 QLIEMMILDGCFIIELLCIVARLVQTHLDDPIFNMAWMFSFLMRDLLRLENQIPFFVLES 202

Query: 672 IFFLLEELTGNFFHVRLDHLARKVFERA 755
           +F L+         V LD  +R + E A
Sbjct: 203 LFGLVS--------VTLDDSSRSLTELA 222


>ref|XP_002310299.1| predicted protein [Populus trichocarpa] gi|222853202|gb|EEE90749.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  149 bits (377), Expect = 5e-34
 Identities = 84/176 (47%), Positives = 110/176 (62%), Gaps = 4/176 (2%)
 Frame = +3

Query: 162 PPALDRSAGSSSFCCISRVPGNLVEINNKAYKPEIVSLGPYHYGVAGDHLKMFEEHKWQY 341
           PP L   A ++S CCI +VP   ++IN K+Y+P IVS+GPYH+G A  HL+M EEHKW Y
Sbjct: 8   PPRLLTKAAANSSCCIFKVPQRFIDINGKSYQPHIVSIGPYHHGEA--HLRMIEEHKWGY 65

Query: 342 LHTHVTRQNQYMAFHLGEQEQLNRDDLEPYLSHILGLEDEIRQSYSENINLDSDELAKMM 521
           L + ++R             Q N  DLE  L  I  LE + R+ YS+ I+LD+ E  +MM
Sbjct: 66  LGSMLSR------------TQNNGLDLEVLLRAIQPLEMKARECYSQIIHLDTCEFVEMM 113

Query: 522 LLDGFFIIEVLRMVSD----DDYDSIFTNQWIIPLLMRDLIKLENQIPFFVLERIF 677
           +LDG FIIE+ R V +    +  D I T  WIIP   RDL++LENQIPFFVLE +F
Sbjct: 114 VLDGVFIIELFRKVGEIVGFEADDPIVTMAWIIPFFYRDLLRLENQIPFFVLECLF 169


>ref|XP_002327764.1| predicted protein [Populus trichocarpa] gi|222836849|gb|EEE75242.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  149 bits (377), Expect = 5e-34
 Identities = 82/177 (46%), Positives = 113/177 (63%), Gaps = 5/177 (2%)
 Frame = +3

Query: 162 PPALDRSAGSSSFCCISRVPGNLVEINNKAYKPEIVSLGPYHYGVAGDHLKMFEEHKWQY 341
           PP L   A ++S CCI +VP   ++IN K+Y+P +VS+GPYH+G   +HLKM EEHKW+Y
Sbjct: 8   PPKLLTKAAANSSCCIFKVPQRFIDINGKSYQPHVVSIGPYHHG--EEHLKMIEEHKWRY 65

Query: 342 LHTHVTR-QNQYMAFHLGEQEQLNRDDLEPYLSHILGLEDEIRQSYSENINLDSDELAKM 518
           L + ++R QN+ +             DLE  L  I  LE + R+ YS+ I+ D+DE  +M
Sbjct: 66  LGSILSRTQNKGL-------------DLEVLLKAIQPLEKKARECYSQIIHFDTDEFIEM 112

Query: 519 MLLDGFFIIEVLRMVSD----DDYDSIFTNQWIIPLLMRDLIKLENQIPFFVLERIF 677
           M++DG FIIE+ R V +    +  D I T  WIIP   RDL++LENQIPFFVLE +F
Sbjct: 113 MVVDGCFIIELFRKVGNVVEFEVDDPIVTMAWIIPFFYRDLLRLENQIPFFVLECLF 169


>ref|XP_002335272.1| predicted protein [Populus trichocarpa] gi|222833186|gb|EEE71663.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score =  144 bits (363), Expect = 2e-32
 Identities = 94/226 (41%), Positives = 119/226 (52%), Gaps = 4/226 (1%)
 Frame = +3

Query: 147 KVQQLPPALDRSAGSSSFCCISRVPGNLVEINNKAYKPEIVSLGPYHYGVAGDHLKMFEE 326
           K + LP  L +SAG SS CCI RVP +LVEIN KAY P IVS+GPYH+G    HLKM EE
Sbjct: 40  KTKLLPKLLKKSAGKSS-CCIFRVPQSLVEINKKAYHPHIVSIGPYHHGKV--HLKMIEE 96

Query: 327 HKWQYLHTHVTRQNQYMAFHLGEQEQLNRDDLEPYLSHILGLEDEIRQSYSENINLDSDE 506
           HKW++L   + R  Q+               +  +   I  +E++IR  YSE I     E
Sbjct: 97  HKWRFLGGVLARTQQHGI------------GINDFFKAIAPIEEKIRDCYSETIECSRQE 144

Query: 507 LAKMMLLDGFFIIEVL----RMVSDDDYDSIFTNQWIIPLLMRDLIKLENQIPFFVLERI 674
             +MM+LDG FIIE+      +V  D  D IF    +   +MRDL+KLENQIPFFVLE +
Sbjct: 145 FIEMMVLDGCFIIELFCIIGGIVQRDIDDPIFNMTLMFFFIMRDLLKLENQIPFFVLETL 204

Query: 675 FFLLEELTGNFFHVRLDHLARKVFERAFGIPYVATPSQPDFKPFHL 812
           F      +       L  LA K F+ A   P        D +  HL
Sbjct: 205 FETSILSSRKQIVSSLTELALKFFDHAAERPPEVLRRYKDIRGEHL 250


>ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 442

 Score =  144 bits (362), Expect = 3e-32
 Identities = 81/186 (43%), Positives = 114/186 (61%), Gaps = 4/186 (2%)
 Frame = +3

Query: 138 MMDKVQQLPPALDRSAGSSSFCCISRVPGNLVEINNKAYKPEIVSLGPYHYGVAGDHLKM 317
           M  K+ + P  L +SAG SS CCI RVP  LVEIN+++Y+P I+S+GPYH G    HLKM
Sbjct: 24  MQQKISEEPRLLRKSAGRSS-CCIFRVPRTLVEINSRSYQPHIISIGPYHRG--EPHLKM 80

Query: 318 FEEHKWQYLHTHVTRQNQYMAFHLGEQEQLNRDDLEPYLSHILGLEDEIRQSYSENINLD 497
            EEHKW YL + + R  ++    LG         L+ YL  +  LE E R+ YSE I+LD
Sbjct: 81  IEEHKWLYLGSLIARTQRH---GLG---------LQDYLRALQPLEMEARECYSEIIHLD 128

Query: 498 SDELAKMMLLDGFFIIEVLRMVSD----DDYDSIFTNQWIIPLLMRDLIKLENQIPFFVL 665
           + +  +M++LDG FII+  R +      +  D + +  W+    +RDL+ LENQ+PFFVL
Sbjct: 129 THDFLEMLVLDGCFIIDFFRKIGKMHPFEPDDPLVSMSWVFSFFLRDLLLLENQLPFFVL 188

Query: 666 ERIFFL 683
           +R+F L
Sbjct: 189 QRLFDL 194


Top