BLASTX nr result

ID: Cimicifuga21_contig00003057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003057
         (1703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282818.2| PREDICTED: uncharacterized protein LOC100260...   625   e-176
emb|CBI20489.3| unnamed protein product [Vitis vinifera]              617   e-174
emb|CAN83989.1| hypothetical protein VITISV_039126 [Vitis vinifera]   612   e-172
ref|XP_003607708.1| C2H2 zinc finger protein [Medicago truncatul...   605   e-171
gb|AFK40972.1| unknown [Medicago truncatula]                          605   e-170

>ref|XP_002282818.2| PREDICTED: uncharacterized protein LOC100260605 [Vitis vinifera]
          Length = 483

 Score =  625 bits (1612), Expect = e-176
 Identities = 318/438 (72%), Positives = 351/438 (80%), Gaps = 5/438 (1%)
 Frame = -3

Query: 1425 REKTTKGEEMPTVWMSLKKSLHCKSEPADVHDP-SRNNLSSILTKKTGRSGCSRSISNLR 1249
            ++K  KG+ MPTVW+SL++SLHCKSEP+DVHDP +R  LS+ILTKK  RSGCSRSI+NL+
Sbjct: 46   KKKENKGKNMPTVWLSLRRSLHCKSEPSDVHDPKARRQLSTILTKKPCRSGCSRSIANLK 105

Query: 1248 DVIHGSKRHLEKQPICSPRSIGSSELINPIAHEVILSDSRCELKITGFXXXXXXXXXXXX 1069
            DVIHGSKRH+EK P CSPRSIGSSE +NPI HEVILS+SRCELKITGF            
Sbjct: 106  DVIHGSKRHMEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFQEGGGGGGG 165

Query: 1068 XXXXXXXXXXXXXXXXXXXTM---HPSNSPFRSSATPPRKSPSPLSRNKSSRFGSSATFG 898
                                    HP+   F+S +TPPRKSP  LS  + S FG S  FG
Sbjct: 166  GGVGTGGGSTFVGTLRPGTPGPGGHPTMHYFKSPSTPPRKSPFLLSDREGSGFGGSTIFG 225

Query: 897  DGGG-VSSNLKASYAVYSSMPSLVTCPKCGEQFGKWEAAEAHHLSKHAVTELVEGDSSRK 721
             G G + SN +AS    S+  S VTC KCGEQF KWEA E HHLSKHAVTELVEGDSSRK
Sbjct: 226  GGSGAIHSNNRASLDTDSNGTSAVTCHKCGEQFSKWEAVETHHLSKHAVTELVEGDSSRK 285

Query: 720  IVEIICRTSWLKSENNIARIERVLKVHNMQKTLARFEEYREMVKNKASKLPKKHSRCLAD 541
            IVEIICRTSWLKSEN+  RIERVLKVHNMQKTL RFEEYREMVK KASKLPKKH RCLAD
Sbjct: 286  IVEIICRTSWLKSENHCGRIERVLKVHNMQKTLGRFEEYREMVKTKASKLPKKHPRCLAD 345

Query: 540  GNELLRFYGTTLVCSLGMNGSSNLCISEKCSVCRIIRHGFSTKKELKDGIGVFTTSTSGR 361
            GNELLRFYGTT+ C+LG+NGSSNLCIS+KC VCRIIRHGFS KKELK GIGVFTTSTSGR
Sbjct: 346  GNELLRFYGTTMTCALGVNGSSNLCISDKCCVCRIIRHGFSAKKELKGGIGVFTTSTSGR 405

Query: 360  AFESVELYEENPSLRKALIVCRVIAGRVHRPLENIQELAGQSGFDSLAGKVGLYSNIEEL 181
            AFES+E+Y+E+PS+RKALIVCRVIAGRVHRPLENIQ++AGQSGFDSLAGKVGLYSNIEEL
Sbjct: 406  AFESIEVYDEDPSIRKALIVCRVIAGRVHRPLENIQDMAGQSGFDSLAGKVGLYSNIEEL 465

Query: 180  YLLNSRALLPCFVVICKP 127
            YLLN RALLPCFVVICKP
Sbjct: 466  YLLNPRALLPCFVVICKP 483


>emb|CBI20489.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  617 bits (1591), Expect = e-174
 Identities = 314/426 (73%), Positives = 344/426 (80%), Gaps = 2/426 (0%)
 Frame = -3

Query: 1398 MPTVWMSLKKSLHCKSEPADVHDP-SRNNLSSILTKKTGRSGCSRSISNLRDVIHGSKRH 1222
            MPTVW+SL++SLHCKSEP+DVHDP +R  LS+ILTKK  RSGCSRSI+NL+DVIHGSKRH
Sbjct: 1    MPTVWLSLRRSLHCKSEPSDVHDPKARRQLSTILTKKPCRSGCSRSIANLKDVIHGSKRH 60

Query: 1221 LEKQPICSPRSIGSSELINPIAHEVILSDSRCELKITGFXXXXXXXXXXXXXXXXXXXXX 1042
            +EK P CSPRSIGSSE +NPI HEVILS+SRCELKITG                      
Sbjct: 61   MEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITG---------------------- 98

Query: 1041 XXXXXXXXXXTMHPSNSPFRSSATPPRKSPSPLSRNKSSRFGSSATFGDGGG-VSSNLKA 865
                        HP+   F+S +TPPRKSP  LS  + S FG S  FG G G + SN +A
Sbjct: 99   ------------HPTMHYFKSPSTPPRKSPFLLSDREGSGFGGSTIFGGGSGAIHSNNRA 146

Query: 864  SYAVYSSMPSLVTCPKCGEQFGKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLK 685
            S    S+  S VTC KCGEQF KWEA E HHLSKHAVTELVEGDSSRKIVEIICRTSWLK
Sbjct: 147  SLDTDSNGTSAVTCHKCGEQFSKWEAVETHHLSKHAVTELVEGDSSRKIVEIICRTSWLK 206

Query: 684  SENNIARIERVLKVHNMQKTLARFEEYREMVKNKASKLPKKHSRCLADGNELLRFYGTTL 505
            SEN+  RIERVLKVHNMQKTL RFEEYREMVK KASKLPKKH RCLADGNELLRFYGTT+
Sbjct: 207  SENHCGRIERVLKVHNMQKTLGRFEEYREMVKTKASKLPKKHPRCLADGNELLRFYGTTM 266

Query: 504  VCSLGMNGSSNLCISEKCSVCRIIRHGFSTKKELKDGIGVFTTSTSGRAFESVELYEENP 325
             C+LG+NGSSNLCIS+KC VCRIIRHGFS KKELK GIGVFTTSTSGRAFES+E+Y+E+P
Sbjct: 267  TCALGVNGSSNLCISDKCCVCRIIRHGFSAKKELKGGIGVFTTSTSGRAFESIEVYDEDP 326

Query: 324  SLRKALIVCRVIAGRVHRPLENIQELAGQSGFDSLAGKVGLYSNIEELYLLNSRALLPCF 145
            S+RKALIVCRVIAGRVHRPLENIQ++AGQSGFDSLAGKVGLYSNIEELYLLN RALLPCF
Sbjct: 327  SIRKALIVCRVIAGRVHRPLENIQDMAGQSGFDSLAGKVGLYSNIEELYLLNPRALLPCF 386

Query: 144  VVICKP 127
            VVICKP
Sbjct: 387  VVICKP 392


>emb|CAN83989.1| hypothetical protein VITISV_039126 [Vitis vinifera]
          Length = 429

 Score =  612 bits (1577), Expect = e-172
 Identities = 312/429 (72%), Positives = 343/429 (79%), Gaps = 5/429 (1%)
 Frame = -3

Query: 1398 MPTVWMSLKKSLHCKSEPADVHDP-SRNNLSSILTKKTGRSGCSRSISNLRDVIHGSKRH 1222
            MPTVW+SL++SLHCKSEP+DVHDP +R  LS+ILTKK  RSGCSRSI+NL+DVIHGSKRH
Sbjct: 1    MPTVWLSLRRSLHCKSEPSDVHDPKARRQLSTILTKKPCRSGCSRSIANLKDVIHGSKRH 60

Query: 1221 LEKQPICSPRSIGSSELINPIAHEVILSDSRCELKITGFXXXXXXXXXXXXXXXXXXXXX 1042
            +EK P CSPRSIGSSE +NPI HEVILS+SRCELKITGF                     
Sbjct: 61   MEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFQEGGGGGGGGGVGTGGGS 120

Query: 1041 XXXXXXXXXXTM---HPSNSPFRSSATPPRKSPSPLSRNKSSRFGSSATFGDGGG-VSSN 874
                           HP+   F+S +TPPRKSP  LS  + S FG S  FG G G + SN
Sbjct: 121  TFVGTLRPGTPGPGGHPTMHYFKSPSTPPRKSPFLLSDREGSGFGGSXIFGGGSGAIHSN 180

Query: 873  LKASYAVYSSMPSLVTCPKCGEQFGKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTS 694
             +AS    S+  S VTC KCGEQF KWEA E HHLSKHAVTELVEGDSSRKIVEIICRTS
Sbjct: 181  NRASLDTDSNGASAVTCHKCGEQFSKWEAVETHHLSKHAVTELVEGDSSRKIVEIICRTS 240

Query: 693  WLKSENNIARIERVLKVHNMQKTLARFEEYREMVKNKASKLPKKHSRCLADGNELLRFYG 514
            WLKSEN+  R+ RVLKVHNMQKTL RFEEYREMVK KAS LPKKH RCLADGNELLRFYG
Sbjct: 241  WLKSENHCGRMXRVLKVHNMQKTLGRFEEYREMVKTKASXLPKKHPRCLADGNELLRFYG 300

Query: 513  TTLVCSLGMNGSSNLCISEKCSVCRIIRHGFSTKKELKDGIGVFTTSTSGRAFESVELYE 334
            TT+ C+LG+NGSSNLCIS+KC VCRIIRHGFS KKELK GIGVFTTSTSGRAFES+E+Y+
Sbjct: 301  TTMTCALGVNGSSNLCISDKCCVCRIIRHGFSAKKELKGGIGVFTTSTSGRAFESIEVYD 360

Query: 333  ENPSLRKALIVCRVIAGRVHRPLENIQELAGQSGFDSLAGKVGLYSNIEELYLLNSRALL 154
            E+PS+RKALIVCRVIAGRVHRPLENIQ++AGQSGFDSLAGKVGLYSNIEELYLLN RALL
Sbjct: 361  EDPSIRKALIVCRVIAGRVHRPLENIQDMAGQSGFDSLAGKVGLYSNIEELYLLNPRALL 420

Query: 153  PCFVVICKP 127
            PCFVVICKP
Sbjct: 421  PCFVVICKP 429


>ref|XP_003607708.1| C2H2 zinc finger protein [Medicago truncatula]
            gi|358345288|ref|XP_003636713.1| C2H2 zinc finger protein
            [Medicago truncatula] gi|355502648|gb|AES83851.1| C2H2
            zinc finger protein [Medicago truncatula]
            gi|355508763|gb|AES89905.1| C2H2 zinc finger protein
            [Medicago truncatula]
          Length = 437

 Score =  605 bits (1561), Expect = e-171
 Identities = 319/443 (72%), Positives = 346/443 (78%), Gaps = 10/443 (2%)
 Frame = -3

Query: 1428 YREKTTKGEEMPTVWMSLKKSLHCKSEPADVHDP-SRNNLSSILTKKTG--RSGCSRSIS 1258
            Y+EKT KG  MPTVW SLKKSLHCKSEP+DVHDP +R +LS+ILTKK G  RSGCSRSI+
Sbjct: 2    YKEKTKKGN-MPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKKGGGGRSGCSRSIA 60

Query: 1257 NLRDVIHGSKRHLEKQPICSPRSIGSSELINPIAHEVILSDSRCELKITGFXXXXXXXXX 1078
            NL+DVIHGSKRH+EK P CSPRSIGSSE +NPI HEVILS+SRCELKITGF         
Sbjct: 61   NLKDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFQEGINGGGN 120

Query: 1077 XXXXXXXXXXXXXXXXXXXXXXT-------MHPSNSPFRSSATPPRKSPSPLSRNKSSRF 919
                                          MH  N  FR+S+TPPRKSP  LS   +   
Sbjct: 121  NASGGSSSGGSSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEGSNG-- 178

Query: 918  GSSATFGDGGGVSSNLKASYAVYSSMPSLVTCPKCGEQFGKWEAAEAHHLSKHAVTELVE 739
                 F  GGGV S+ + S    S+  S VTC KCGEQF KWEAAEAHHLSKHAVTELVE
Sbjct: 179  -----FHGGGGVHSSNRMSLETDSNGSSTVTCHKCGEQFNKWEAAEAHHLSKHAVTELVE 233

Query: 738  GDSSRKIVEIICRTSWLKSENNIARIERVLKVHNMQKTLARFEEYREMVKNKASKLPKKH 559
            GDSSRKIVEIICRTSWLKSEN+  RIERVLKVHNMQKTLARFEEYREMVK KASKL KKH
Sbjct: 234  GDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKH 293

Query: 558  SRCLADGNELLRFYGTTLVCSLGMNGSSNLCISEKCSVCRIIRHGFSTKKELKDGIGVFT 379
             RCLADGNELLRFYGTT+ CSLG+NGSS+LC+SEKC VCRIIR GFS KKELK GIGVFT
Sbjct: 294  PRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRSGFSAKKELKGGIGVFT 353

Query: 378  TSTSGRAFESVELYEENPSLRKALIVCRVIAGRVHRPLENIQELAGQSGFDSLAGKVGLY 199
            TSTSGRAFES+E+++  PSLRKALIVCRVIAGRVHRPLENIQE+A Q+GFDSLAGKVGLY
Sbjct: 354  TSTSGRAFESIEIFDNEPSLRKALIVCRVIAGRVHRPLENIQEMASQTGFDSLAGKVGLY 413

Query: 198  SNIEELYLLNSRALLPCFVVICK 130
            SNIEELYLLN RALLPCFVVICK
Sbjct: 414  SNIEELYLLNPRALLPCFVVICK 436


>gb|AFK40972.1| unknown [Medicago truncatula]
          Length = 437

 Score =  605 bits (1559), Expect = e-170
 Identities = 319/443 (72%), Positives = 346/443 (78%), Gaps = 10/443 (2%)
 Frame = -3

Query: 1428 YREKTTKGEEMPTVWMSLKKSLHCKSEPADVHDP-SRNNLSSILTKKTG--RSGCSRSIS 1258
            Y+EKT KG  MPTVW SLKKSLHCKSEP+DVHDP +R +LS+ILTKK G  RSGCSRSI+
Sbjct: 2    YKEKTKKGN-MPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKKGGGGRSGCSRSIA 60

Query: 1257 NLRDVIHGSKRHLEKQPICSPRSIGSSELINPIAHEVILSDSRCELKITGFXXXXXXXXX 1078
            NL+DVIHGSKRH+EK P CSPRSIGSSE +NPI HEVILS+SRCELKITGF         
Sbjct: 61   NLKDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFQEGINGGGN 120

Query: 1077 XXXXXXXXXXXXXXXXXXXXXXT-------MHPSNSPFRSSATPPRKSPSPLSRNKSSRF 919
                                          MH  N  FR+S+TPPRKSP  LS   +   
Sbjct: 121  NASGGSSSGGSSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEGSNG-- 178

Query: 918  GSSATFGDGGGVSSNLKASYAVYSSMPSLVTCPKCGEQFGKWEAAEAHHLSKHAVTELVE 739
                 F  GGGV S+ + S    S+  S VTC KCGEQF KWEAAEAHHLSKHAVTELVE
Sbjct: 179  -----FHGGGGVHSSNRMSLETDSNGSSTVTCHKCGEQFNKWEAAEAHHLSKHAVTELVE 233

Query: 738  GDSSRKIVEIICRTSWLKSENNIARIERVLKVHNMQKTLARFEEYREMVKNKASKLPKKH 559
            GDSSRKIVEIICRTSWLKSEN+  RIERVLKVHNMQKTLARFEEYREMVK KASKL KKH
Sbjct: 234  GDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKH 293

Query: 558  SRCLADGNELLRFYGTTLVCSLGMNGSSNLCISEKCSVCRIIRHGFSTKKELKDGIGVFT 379
             RCLADGNELLRFYGTT+ CSLG+NGSS+LC+SEKC VCRIIR GFS KKELK GIGVFT
Sbjct: 294  PRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCWVCRIIRSGFSAKKELKGGIGVFT 353

Query: 378  TSTSGRAFESVELYEENPSLRKALIVCRVIAGRVHRPLENIQELAGQSGFDSLAGKVGLY 199
            TSTSGRAFES+E+++  PSLRKALIVCRVIAGRVHRPLENIQE+A Q+GFDSLAGKVGLY
Sbjct: 354  TSTSGRAFESIEIFDNEPSLRKALIVCRVIAGRVHRPLENIQEMASQTGFDSLAGKVGLY 413

Query: 198  SNIEELYLLNSRALLPCFVVICK 130
            SNIEELYLLN RALLPCFVVICK
Sbjct: 414  SNIEELYLLNPRALLPCFVVICK 436


Top