BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003039
         (1441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin...   438   e-120
ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu...   412   e-112
ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|2...   386   e-105
ref|XP_002320490.1| predicted protein [Populus trichocarpa] gi|2...   384   e-104
ref|XP_004143196.1| PREDICTED: zinc finger CCCH domain-containin...   343   8e-92

>ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
            vinifera] gi|297739220|emb|CBI28871.3| unnamed protein
            product [Vitis vinifera]
          Length = 450

 Score =  438 bits (1126), Expect = e-120
 Identities = 221/403 (54%), Positives = 260/403 (64%), Gaps = 48/403 (11%)
 Frame = -3

Query: 1439 EPDCIYYLRTGMCGYGSNCRFNHPAYIVGQLAQYSSELPERPGQPDCQFFLKTGTCKFGA 1260
            EPDCIYYLRTG+CGYGSNCRFNHPAY   Q AQY  ELPER GQPDC +FLKTGTCK+G+
Sbjct: 50   EPDCIYYLRTGLCGYGSNCRFNHPAYSE-QGAQYRGELPERVGQPDCGYFLKTGTCKYGS 108

Query: 1259 TCKYHHSKDKNMAMQVPLNIYGLPMRQDEKSCPYYMRTWSCKFGVACRFHHPQPAGVGTV 1080
            TCKYHH +D++ A  V LNI GLPMRQ+EK C YYMRT  CKFG AC+FHHPQPA  GTV
Sbjct: 109  TCKYHHPRDRHGAGPVSLNIVGLPMRQEEKPCSYYMRTGLCKFGAACKFHHPQPASAGTV 168

Query: 1079 LXXXXXXXXXXXXXXXXXXXXXXXXXGIPTWSLPRAPSIPGLPLQSPQPYMPLILSPSQG 900
            L                         G+P WSLPRAP IPG  +Q PQ YMP++LSPSQG
Sbjct: 169  LPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLPRAPYIPGPRMQGPQTYMPIVLSPSQG 228

Query: 899  ISPAQQRWNTCM-----------------------AESSSAGQVGLLSESVPHYPERPEQ 789
            I PAQ  WNT M                       +ES S+GQV LLS  +PH PERP+Q
Sbjct: 229  IVPAQG-WNTYMGNMSPISSTGILGSNLVYNSRNQSESGSSGQVHLLSSLIPHLPERPDQ 287

Query: 788  PECQYYAKTGRCKYGSDCKYHHPKERLAPLATCDLGPFGLPLRPGQPVCTNYTMYGMCKF 609
            PEC+Y+  TG CKYGSDCKYHHPKER+A LAT  LGP GLPLRPGQ VC++Y +YG+CK+
Sbjct: 288  PECRYFMSTGSCKYGSDCKYHHPKERIAQLATNTLGPLGLPLRPGQAVCSHYNLYGLCKY 347

Query: 608  GSTCKFDHPWTGF--YNYGVSMPALSVVDPALYSNYINSPEPRSLKISPAKSVKLSN--- 444
            G TCKFDHP TG+  YNY +S+P LS++DP+L     NS    S + SP+KS K  +   
Sbjct: 348  GPTCKFDHPLTGYSSYNYCLSLPPLSILDPSLLPYQRNSSTVHSSETSPSKSSKFPDWVQ 407

Query: 443  --------------------PKEATSPRHTTPTSSEHPHDFSE 375
                                P++A S  H++P SSE P D S+
Sbjct: 408  KTESGSTKSQNPDTKAPEGPPEQAGSLLHSSPNSSEPPQDQSD 450



 Score = 78.2 bits (191), Expect = 5e-12
 Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
 Frame = -3

Query: 836 GLLSESVPHYPERPEQPECQYYAKTGRCKYGSDCKYHHPKERLAPLATCDLGP---FGLP 666
           G +  S P YP+RP +P+C YY +TG C YGS+C+++HP       A  + G      LP
Sbjct: 36  GSVGHSSP-YPDRPGEPDCIYYLRTGLCGYGSNCRFNHP-------AYSEQGAQYRGELP 87

Query: 665 LRPGQPVCTNYTMYGMCKFGSTCKFDHP 582
            R GQP C  +   G CK+GSTCK+ HP
Sbjct: 88  ERVGQPDCGYFLKTGTCKYGSTCKYHHP 115


>ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
            gi|223531614|gb|EEF33442.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 456

 Score =  412 bits (1059), Expect = e-112
 Identities = 207/402 (51%), Positives = 260/402 (64%), Gaps = 50/402 (12%)
 Frame = -3

Query: 1439 EPDCIYYLRTGMCGYGSNCRFNHPAYIVGQLAQYSSELPERPGQPDCQFFLKTGTCKFGA 1260
            EPDC+YYLRTG+CGYG+NCRFNHP Y   Q  Q+  ELPER GQPDC ++LKTGTCK+G+
Sbjct: 57   EPDCVYYLRTGLCGYGNNCRFNHPPY-AAQGNQFKEELPERVGQPDCGYYLKTGTCKYGS 115

Query: 1259 TCKYHHSKDKNMAMQVPLNIYGLPMRQDEKSCPYYMRTWSCKFGVACRFHHPQPAGVGTV 1080
            TCKYHH +D+N A  V  NI GLPMRQDEKSCPYYMRT SCKFGVAC+FHHPQPA +GT 
Sbjct: 116  TCKYHHPRDRNGAGPVSFNIVGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPAPLGTG 175

Query: 1079 LXXXXXXXXXXXXXXXXXXXXXXXXXGIPTWSLPRAPSIPGLPLQSPQPYMPLILSPSQG 900
            L                         G+PTWSLPRAP + G  LQ PQ YMP +LSPSQG
Sbjct: 176  LPFTGPAASGPMASSNLPSSGLPYVGGLPTWSLPRAPYVSGPRLQGPQTYMPAVLSPSQG 235

Query: 899  ISPAQQRWNTCM-----------------------AESSSAGQVGLLSESVPHYPERPEQ 789
            +  AQ  WNT +                       +ES S+GQV +LS +  + PERP+Q
Sbjct: 236  VVAAQG-WNTYVGNLSPMSSGSVLGSSIVYNSRNQSESGSSGQVHMLSTTSSNLPERPDQ 294

Query: 788  PECQYYAKTGRCKYGSDCKYHHPKERLAPLATCDLGPFGLPLRPGQPVCTNYTMYGMCKF 609
            PEC+Y+  TG CKYGSDCKYHHPKER+A LAT  +GP GLP RPGQP+C+NY+MYG+CKF
Sbjct: 295  PECRYFMNTGTCKYGSDCKYHHPKERIAQLATNSIGPVGLPSRPGQPICSNYSMYGLCKF 354

Query: 608  GSTCKFDHPWTGF-YNYGVSMPALSVVDPALYS----------------------NYINS 498
            G TC+FDHP+TG+ Y Y +S+  LS++D +L S                      +++ +
Sbjct: 355  GPTCRFDHPFTGYPYGYSLSLQPLSIIDSSLLSYPRMSPPALSSESPISLSSKFPDWVQN 414

Query: 497  PEPRSLKISPA-KSVKLSN--PKEATS-PRHTTPTSSEHPHD 384
            P+  S K   + ++ K+S+  P++A S P H++  SSE  HD
Sbjct: 415  PDGASSKHQNSDRNTKISDDQPEQAGSPPPHSSQASSEPSHD 456



 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 38/85 (44%), Positives = 52/85 (61%)
 Frame = -3

Query: 836 GLLSESVPHYPERPEQPECQYYAKTGRCKYGSDCKYHHPKERLAPLATCDLGPFGLPLRP 657
           G ++ S P YP+RP +P+C YY +TG C YG++C+++HP       A  +     LP R 
Sbjct: 43  GGMAPSSP-YPDRPGEPDCVYYLRTGLCGYGNNCRFNHPPY----AAQGNQFKEELPERV 97

Query: 656 GQPVCTNYTMYGMCKFGSTCKFDHP 582
           GQP C  Y   G CK+GSTCK+ HP
Sbjct: 98  GQPDCGYYLKTGTCKYGSTCKYHHP 122


>ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|222844581|gb|EEE82128.1|
            predicted protein [Populus trichocarpa]
          Length = 450

 Score =  386 bits (991), Expect = e-105
 Identities = 196/376 (52%), Positives = 241/376 (64%), Gaps = 30/376 (7%)
 Frame = -3

Query: 1436 PDCIYYLRTGMCGYGSNCRFNHPAYIVGQLAQYSSELPERPGQPDCQFFLKTGTCKFGAT 1257
            PDC YYLRTG+CGYGSNCR+NHP Y   Q  Q   ELPER GQPDC +++KTGTCK+G+T
Sbjct: 53   PDCGYYLRTGLCGYGSNCRYNHPIY-AAQGTQLREELPERIGQPDCGYYIKTGTCKYGST 111

Query: 1256 CKYHHSKDKNMAMQVPLNIYGLPMRQDEKSCPYYMRTWSCKFGVACRFHHPQPAGVGTVL 1077
            CKYHH +D+N A  V  N  GLPMRQDEKSCPYYMRT SCKFGVAC+FHHPQPA +GT L
Sbjct: 112  CKYHHPRDRNGAGPVSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSL 171

Query: 1076 XXXXXXXXXXXXXXXXXXXXXXXXXGIPTWSLPRAPS-IPGLPLQSPQPYMPLILSPSQG 900
                                     G+PTWSLPRAP  + G  LQ PQ YMP+++SPSQG
Sbjct: 172  PLTGAAAFGSTGSPIVPSSGLPYVGGLPTWSLPRAPPYMSGTHLQGPQAYMPVVVSPSQG 231

Query: 899  ISPAQQRWNTCMAES---SSAGQVG------------------LLSESVPHYPERPEQPE 783
            I P    WNT +  S   SS+  +G                  LLS ++P  PERP+QPE
Sbjct: 232  IVPV-PGWNTYVGNSNPMSSSSILGSNRAYDSRNHGDSGSSGHLLSTAIPALPERPDQPE 290

Query: 782  CQYYAKTGRCKYGSDCKYHHPKERLAPLATCDLGPFGLPLRPGQPVCTNYTMYGMCKFGS 603
            C+++  +G CKYGSDCKYHHPKER+A LAT  +GPFGLPLRPGQ VC +Y+MYG+CKFG 
Sbjct: 291  CRHFMSSGTCKYGSDCKYHHPKERIAQLATNTMGPFGLPLRPGQAVCPDYSMYGICKFGP 350

Query: 602  TCKFDHPWTGF-YNYGVSMPALSVVDPALYSNYINSPEPRSLKISPAKSVKLS------- 447
            TC++DHP   + YNY +S+P+LS++D    S+ +  P      +S A  V LS       
Sbjct: 351  TCRYDHPLPTYPYNYSLSLPSLSMMD----SSLVTYPRMAQAALSSATPVSLSKLPDLIR 406

Query: 446  NPKEATSPRHTTPTSS 399
            NP  A+  +H    S+
Sbjct: 407  NPDGASYNKHQNSDSN 422



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 39/85 (45%), Positives = 51/85 (60%)
 Frame = -3

Query: 836 GLLSESVPHYPERPEQPECQYYAKTGRCKYGSDCKYHHPKERLAPLATCDLGPFGLPLRP 657
           G +++S P YP+RP  P+C YY +TG C YGS+C+Y+HP          +     LP R 
Sbjct: 38  GGMAQSSP-YPDRPGVPDCGYYLRTGLCGYGSNCRYNHPIYAAQGTQLRE----ELPERI 92

Query: 656 GQPVCTNYTMYGMCKFGSTCKFDHP 582
           GQP C  Y   G CK+GSTCK+ HP
Sbjct: 93  GQPDCGYYIKTGTCKYGSTCKYHHP 117



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
 Frame = -3

Query: 1439 EPDCIYYLRTGMCGYGSNCRFNHPAYIVGQLAQYSS---ELPERPGQPDCQFFLKTGTCK 1269
            +P+C +++ +G C YGS+C+++HP   + QLA  +     LP RPGQ  C  +   G CK
Sbjct: 288  QPECRHFMSSGTCKYGSDCKYHHPKERIAQLATNTMGPFGLPLRPGQAVCPDYSMYGICK 347

Query: 1268 FGATCKYHH 1242
            FG TC+Y H
Sbjct: 348  FGPTCRYDH 356


>ref|XP_002320490.1| predicted protein [Populus trichocarpa] gi|222861263|gb|EEE98805.1|
            predicted protein [Populus trichocarpa]
          Length = 446

 Score =  384 bits (986), Expect = e-104
 Identities = 196/374 (52%), Positives = 234/374 (62%), Gaps = 28/374 (7%)
 Frame = -3

Query: 1436 PDCIYYLRTGMCGYGSNCRFNHPAYIVGQLAQYSSELPERPGQPDCQFFLKTGTCKFGAT 1257
            PDC YYLRTG+CGYGSNCRFNHP Y     AQ   ELPER GQPDC ++LKTGTCK+G+T
Sbjct: 53   PDCGYYLRTGLCGYGSNCRFNHPVY-AALGAQLREELPERVGQPDCGYYLKTGTCKYGST 111

Query: 1256 CKYHHSKDKNMAMQVPLNIYGLPMRQDEKSCPYYMRTWSCKFGVACRFHHPQPAGVGTVL 1077
            CKYHH +D+N A  V  N  GLPMRQDEKSCPYYMRT SCKFGVAC+FHHPQPA +GT  
Sbjct: 112  CKYHHPRDRNGAGPVSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSF 171

Query: 1076 XXXXXXXXXXXXXXXXXXXXXXXXXGIPTWSLPRAPSIPGLPLQSPQPYMPLILSPSQGI 897
                                     G+PTWSLPRAP + G  LQ PQ YMP+++SPS GI
Sbjct: 172  SLTGAAAFGSTGSPIVPSSGLPYVGGLPTWSLPRAPLMSGTNLQGPQAYMPVVVSPSPGI 231

Query: 896  SPAQQRWNTCM-----------------------AESSSAGQVGLLSESVPHYPERPEQP 786
             P    WNT +                        +S S GQV LLS   P  PERP QP
Sbjct: 232  IPV-PGWNTYVGNLNPMSSSSILGSNRAYDSRNQGDSGSGGQVHLLSTVSPILPERPGQP 290

Query: 785  ECQYYAKTGRCKYGSDCKYHHPKERLAPLATCDLGPFGLPLRPGQPVCTNYTMYGMCKFG 606
            EC+++  TG CKYGSDCKYHHPKER+A LAT  +G  GLP RPGQ VC +Y+MYG+CKFG
Sbjct: 291  ECRHFMSTGTCKYGSDCKYHHPKERIAQLATNTMGLLGLPSRPGQAVCPDYSMYGICKFG 350

Query: 605  STCKFDHP-WTGFYNYGVSMPALSVVDPALYSNYINSPEPRSLKISPAKSVKL----SNP 441
             TC++DHP  T  YNY +S+P+LS++D +L +       PR  + +P    KL     NP
Sbjct: 351  PTCRYDHPIHTYPYNYSLSLPSLSIMDSSLIT------YPRMAQAAPVTLSKLPDLIHNP 404

Query: 440  KEATSPRHTTPTSS 399
              A+  +H  P +S
Sbjct: 405  DGASYNKHQNPDTS 418



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 38/85 (44%), Positives = 51/85 (60%)
 Frame = -3

Query: 836 GLLSESVPHYPERPEQPECQYYAKTGRCKYGSDCKYHHPKERLAPLATCDLGPFGLPLRP 657
           G +++S P YP+RP  P+C YY +TG C YGS+C+++HP          +     LP R 
Sbjct: 38  GGMAQSSP-YPDRPGAPDCGYYLRTGLCGYGSNCRFNHPVYAALGAQLRE----ELPERV 92

Query: 656 GQPVCTNYTMYGMCKFGSTCKFDHP 582
           GQP C  Y   G CK+GSTCK+ HP
Sbjct: 93  GQPDCGYYLKTGTCKYGSTCKYHHP 117



 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
 Frame = -3

Query: 1439 EPDCIYYLRTGMCGYGSNCRFNHPAYIVGQLAQYSS---ELPERPGQPDCQFFLKTGTCK 1269
            +P+C +++ TG C YGS+C+++HP   + QLA  +     LP RPGQ  C  +   G CK
Sbjct: 289  QPECRHFMSTGTCKYGSDCKYHHPKERIAQLATNTMGLLGLPSRPGQAVCPDYSMYGICK 348

Query: 1268 FGATCKYHH 1242
            FG TC+Y H
Sbjct: 349  FGPTCRYDH 357


>ref|XP_004143196.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Cucumis
            sativus] gi|449515163|ref|XP_004164619.1| PREDICTED: zinc
            finger CCCH domain-containing protein 3-like [Cucumis
            sativus]
          Length = 430

 Score =  343 bits (879), Expect = 8e-92
 Identities = 166/318 (52%), Positives = 208/318 (65%), Gaps = 18/318 (5%)
 Frame = -3

Query: 1439 EPDCIYYLRTGMCGYGSNCRFNHPAYIVGQLAQYSSELPERPGQPDCQFFLKTGTCKFGA 1260
            EPDC+YY+RTG C YGSNCRFNHP Y VGQ A Y+ ELPER GQPDC++FLKTGTCK+G 
Sbjct: 49   EPDCLYYMRTGSCSYGSNCRFNHPVY-VGQGALYNGELPERIGQPDCEYFLKTGTCKYGG 107

Query: 1259 TCKYHHSKDKNMAMQVPLNIYGLPMRQDEKSCPYYMRTWSCKFGVACRFHHPQPAGVGTV 1080
            +CKYHH +D+  A  V  NI GLPMRQ+EKSCPYY+RT SCKFGV+C+F+HPQP+ VG +
Sbjct: 108  SCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCPYYLRTGSCKFGVSCKFNHPQPSPVGNM 167

Query: 1079 LXXXXXXXXXXXXXXXXXXXXXXXXXGIPTWSLPRAPSIPGLPLQSPQPYMPLILSPSQG 900
            L                           P WS+PR   +PG  +Q  Q Y+P+++SPSQG
Sbjct: 168  L----PQARPGALGSGGTPFMPSSGVPYPAWSMPRVQYMPGPCVQGQQSYVPVLVSPSQG 223

Query: 899  ISPAQQRWNTCMA-----------------ESSSAGQVGLLSESVPHYPERPEQPECQYY 771
               AQ  WNT ++                 +S S GQ+  LS S P  P+RP+QPEC+Y+
Sbjct: 224  AIAAQD-WNTYVSNVNPILPNLGYNNINLEDSYSNGQLA-LSTSTPTLPDRPDQPECRYF 281

Query: 770  AKTGRCKYGSDCKYHHPKERLAPLATCDLGPFGLPLRPGQPVCTNYTMYGMCKFGSTCKF 591
               G CKYGSDCK+HHPK+R+A  AT      GLP RPGQ +C+ Y MYG+CK+G +CKF
Sbjct: 282  MNNGTCKYGSDCKFHHPKQRIAQSAT---NALGLPSRPGQAICSYYNMYGLCKYGPSCKF 338

Query: 590  DHPWTGF-YNYGVSMPAL 540
            DHP   + YNYG ++P L
Sbjct: 339  DHPSPTYPYNYGFTLPLL 356



 Score = 81.6 bits (200), Expect = 5e-13
 Identities = 40/110 (36%), Positives = 61/110 (55%)
 Frame = -3

Query: 911 PSQGISPAQQRWNTCMAESSSAGQVGLLSESVPHYPERPEQPECQYYAKTGRCKYGSDCK 732
           P+Q    ++  W   ++++   G     +ES P YP+RP +P+C YY +TG C YGS+C+
Sbjct: 13  PNQSPDISEALWRLEISDNQDGGDA---AESSP-YPDRPGEPDCLYYMRTGSCSYGSNCR 68

Query: 731 YHHPKERLAPLATCDLGPFGLPLRPGQPVCTNYTMYGMCKFGSTCKFDHP 582
           ++HP      +    L    LP R GQP C  +   G CK+G +CK+ HP
Sbjct: 69  FNHP----VYVGQGALYNGELPERIGQPDCEYFLKTGTCKYGGSCKYHHP 114