BLASTX nr result

ID: Cimicifuga21_contig00003033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003033
         (2198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139912.1| PREDICTED: succinate-semialdehyde dehydrogen...   835   0.0  
ref|XP_003545937.1| PREDICTED: succinate-semialdehyde dehydrogen...   831   0.0  
ref|NP_001233841.1| succinic semialdehyde dehydrogenase [Solanum...   828   0.0  
ref|XP_002315079.1| predicted protein [Populus trichocarpa] gi|2...   827   0.0  
ref|XP_003532910.1| PREDICTED: succinate-semialdehyde dehydrogen...   822   0.0  

>ref|XP_004139912.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
            [Cucumis sativus]
          Length = 541

 Score =  835 bits (2156), Expect = 0.0
 Identities = 415/502 (82%), Positives = 458/502 (91%), Gaps = 1/502 (0%)
 Frame = -2

Query: 1987 SHSHRF-IRQMSMDTKSAAAQLRSSGLLKTQGLIGGKWIDAYDGKTIKVCDPATGDVIVN 1811
            SHSH   IRQMS + +S   +L SSGLL++QGLIGGKWIDAYDGKT+KV +PA G+VI N
Sbjct: 37   SHSHTLLIRQMSSEAQSITTRLHSSGLLRSQGLIGGKWIDAYDGKTLKVQNPANGEVITN 96

Query: 1810 VPFMGRRETNDAISSAYDTFKAWSRLTANERSKCLRKWYDLLIAHKEELGRLITLEQGKP 1631
            VP MG+RET+DAISSAYD FK+WS+LTA +RS  LRKWY+LL+AHKEELG+LITLEQGKP
Sbjct: 97   VPLMGKRETDDAISSAYDAFKSWSKLTAADRSNRLRKWYELLMAHKEELGQLITLEQGKP 156

Query: 1630 LKEAMGEVNYGASFIEFYAEEAKRVYGDIIPPTLADRRLFVLKQPVGVVGAITPWNFPLA 1451
            LKEA+GE NYGASFIEF++EEAKRVYGDII PT+ADRRL VLKQPVGVVG ITPWNFPLA
Sbjct: 157  LKEALGETNYGASFIEFFSEEAKRVYGDIISPTIADRRLLVLKQPVGVVGIITPWNFPLA 216

Query: 1450 MITRKVGPALACGCTVVIKPSELTPLTALAAVELSLQAGIPPGAVNVVMGNASEIGDTLL 1271
            MITRKVGPALA GCTVVIKPSELTPLTALAA ELSLQAGIPPG VNVVMG+A  IGD +L
Sbjct: 217  MITRKVGPALASGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAIL 276

Query: 1270 ESTQVRKITFTGSTAVGKKLMAGAAATVKKVSLELGGNAPCIVFDDADLDVAVKGSIAAK 1091
             S+QVRKITFTGSTAVGKKLMAGAA TVK+VS ELGGNAPCI+FDDAD+DVAVKGSIAAK
Sbjct: 277  ASSQVRKITFTGSTAVGKKLMAGAAGTVKRVSFELGGNAPCIIFDDADVDVAVKGSIAAK 336

Query: 1090 FRNSGQTCVCANRILVQEGIYEKFANSFASAVQNLQVGNGFMESVTQGPLINEAAVQKVE 911
            FRNSGQTCVCANRILVQEGIYEKF N+F+ AVQNLQVG+GF E V QGPLINEAAVQKVE
Sbjct: 337  FRNSGQTCVCANRILVQEGIYEKFTNAFSKAVQNLQVGDGFGEGVAQGPLINEAAVQKVE 396

Query: 910  TFIQDAVSKGAKVKLGGKRHSLGSTFYEPTVISDVNSEMLLSREEVFGPVAPLLRFKTEE 731
             F+QDA +KGAKV LGGKRHSLG TF+EPTV++ V S+MLLSREEVFGPVAPLL F+TEE
Sbjct: 397  KFLQDATTKGAKVLLGGKRHSLGMTFFEPTVVAGVKSDMLLSREEVFGPVAPLLPFRTEE 456

Query: 730  EAIQMANDTNAGLAAYVFTTNVQRSWRVSEALEYGLVGVNEGIISTEVAPFGGVKQSGLG 551
            EAI +ANDTNAGLAAY+FT N+QRSWRV+EALEYG+VGVNEG+ISTEVAPFGGVKQSGLG
Sbjct: 457  EAIALANDTNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTEVAPFGGVKQSGLG 516

Query: 550  REGSKYGMDEYLEVKYVCLGNM 485
            REGSKYGMDEYLE+KYVCLGNM
Sbjct: 517  REGSKYGMDEYLELKYVCLGNM 538


>ref|XP_003545937.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
            [Glycine max]
          Length = 537

 Score =  831 bits (2146), Expect = 0.0
 Identities = 418/532 (78%), Positives = 466/532 (87%), Gaps = 9/532 (1%)
 Frame = -2

Query: 2053 SMSIAHIALRGYKLLTRPSLDFS---------HSHRFIRQMSMDTKSAAAQLRSSGLLKT 1901
            ++++  +ALR  KLL+RP    S          S    R+MSMD +S A+QL SSGLL+T
Sbjct: 3    ALNLCRMALRSSKLLSRPYHRLSVQLQMQMQPSSPPLTRKMSMDAQSVASQLNSSGLLRT 62

Query: 1900 QGLIGGKWIDAYDGKTIKVCDPATGDVIVNVPFMGRRETNDAISSAYDTFKAWSRLTANE 1721
            QGLIGGKW DAYDGKTIKV +PATG+ IV+V  MG RETNDAIS+AYD + +WS+ TA E
Sbjct: 63   QGLIGGKWSDAYDGKTIKVYNPATGESIVDVACMGGRETNDAISAAYDAYGSWSKTTAAE 122

Query: 1720 RSKCLRKWYDLLIAHKEELGRLITLEQGKPLKEAMGEVNYGASFIEFYAEEAKRVYGDII 1541
            RSK LRKWYDLL+ HKEEL +LITLEQGKPLKE++GE+NYGA FIEF AEEAKR+YGDII
Sbjct: 123  RSKFLRKWYDLLMVHKEELAQLITLEQGKPLKESVGEINYGAGFIEFAAEEAKRIYGDII 182

Query: 1540 PPTLADRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALA 1361
            P  L+DRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALA
Sbjct: 183  PAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALA 242

Query: 1360 AVELSLQAGIPPGAVNVVMGNASEIGDTLLESTQVRKITFTGSTAVGKKLMAGAAATVKK 1181
            A ELS+QAGIPPG VNVVMGNA +IGD LL S QVRKITFTGSTAVGKKLMAG+A TVKK
Sbjct: 243  AAELSIQAGIPPGVVNVVMGNAPDIGDALLASPQVRKITFTGSTAVGKKLMAGSAETVKK 302

Query: 1180 VSLELGGNAPCIVFDDADLDVAVKGSIAAKFRNSGQTCVCANRILVQEGIYEKFANSFAS 1001
            VSLELGGNAPCIVFDDADLDVAVKG++AAKFRNSGQTCVCANRI+VQEGIYEKFAN+   
Sbjct: 303  VSLELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRIIVQEGIYEKFANALRD 362

Query: 1000 AVQNLQVGNGFMESVTQGPLINEAAVQKVETFIQDAVSKGAKVKLGGKRHSLGSTFYEPT 821
             VQN++VG+GF E V QGPLINEAAV+KVE+ I DA SKGAKV LGGKRHSLG TFYEPT
Sbjct: 363  TVQNMKVGDGFSEGVAQGPLINEAAVKKVESLIHDATSKGAKVILGGKRHSLGFTFYEPT 422

Query: 820  VISDVNSEMLLSREEVFGPVAPLLRFKTEEEAIQMANDTNAGLAAYVFTTNVQRSWRVSE 641
            VISDVNS+M +SREE FGPVAPLLRFKTEE+AI++ANDTNAGL +Y+FT ++QRSWRV+E
Sbjct: 423  VISDVNSDMRISREEAFGPVAPLLRFKTEEDAIRIANDTNAGLGSYIFTNSIQRSWRVAE 482

Query: 640  ALEYGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGMDEYLEVKYVCLGNM 485
            ALEYGLVGVNEG+ISTEVAPFGG KQSGLGREGSKYGMDEYLE+KYVCLGNM
Sbjct: 483  ALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCLGNM 534


>ref|NP_001233841.1| succinic semialdehyde dehydrogenase [Solanum lycopersicum]
            gi|171854593|dbj|BAG16487.1| succinic semialdehyde
            dehydrogenase [Solanum lycopersicum]
          Length = 522

 Score =  828 bits (2138), Expect = 0.0
 Identities = 405/495 (81%), Positives = 458/495 (92%)
 Frame = -2

Query: 1969 IRQMSMDTKSAAAQLRSSGLLKTQGLIGGKWIDAYDGKTIKVCDPATGDVIVNVPFMGRR 1790
            +R M+ DT+S AA+L SSGLL++Q LIGGKW+DAYDGKTIKV +PATG+VI +VP MG R
Sbjct: 27   VRLMTTDTQSVAAKLSSSGLLRSQALIGGKWVDAYDGKTIKVHNPATGEVITDVPCMGGR 86

Query: 1789 ETNDAISSAYDTFKAWSRLTANERSKCLRKWYDLLIAHKEELGRLITLEQGKPLKEAMGE 1610
            ETNDAISSAYD F +WS+LTA ERS+ LRKWYDL++AHKEELG+L+TLEQGKPLKEA+GE
Sbjct: 87   ETNDAISSAYDAFSSWSKLTAAERSRYLRKWYDLIMAHKEELGQLMTLEQGKPLKEAIGE 146

Query: 1609 VNYGASFIEFYAEEAKRVYGDIIPPTLADRRLFVLKQPVGVVGAITPWNFPLAMITRKVG 1430
            V+YGA FIEF AEE KR+YGDIIP  LADRRLFVLKQPVGVVGAITPWNFPLAMITRKVG
Sbjct: 147  VSYGAGFIEFSAEEGKRIYGDIIPSPLADRRLFVLKQPVGVVGAITPWNFPLAMITRKVG 206

Query: 1429 PALACGCTVVIKPSELTPLTALAAVELSLQAGIPPGAVNVVMGNASEIGDTLLESTQVRK 1250
            PALACGCTVVIKPSELTPLTALAA ELS+QAGIPPG VNVVMGNA +IGD LL S QVRK
Sbjct: 207  PALACGCTVVIKPSELTPLTALAAAELSIQAGIPPGVVNVVMGNAPDIGDALLASPQVRK 266

Query: 1249 ITFTGSTAVGKKLMAGAAATVKKVSLELGGNAPCIVFDDADLDVAVKGSIAAKFRNSGQT 1070
            ITFTGST VGKKLM GAAATVKKVSLELGGNAPCI+FDDADL+VA+KG++A KFRN+GQT
Sbjct: 267  ITFTGSTKVGKKLMEGAAATVKKVSLELGGNAPCIIFDDADLEVALKGALATKFRNTGQT 326

Query: 1069 CVCANRILVQEGIYEKFANSFASAVQNLQVGNGFMESVTQGPLINEAAVQKVETFIQDAV 890
            CVCANRILVQEGIY+KFAN+FA AVQN++VG+GF E V QGPLINEAAVQKVE F+ +A 
Sbjct: 327  CVCANRILVQEGIYDKFANAFAKAVQNMKVGDGFTEGVEQGPLINEAAVQKVEYFVDEAT 386

Query: 889  SKGAKVKLGGKRHSLGSTFYEPTVISDVNSEMLLSREEVFGPVAPLLRFKTEEEAIQMAN 710
            SKGAKV +GGKRHSLG TFYEPTV++ VNSEMLL++EEVFGPVAPLL+FKT+EEAIQMAN
Sbjct: 387  SKGAKVLVGGKRHSLGMTFYEPTVVTGVNSEMLLAKEEVFGPVAPLLKFKTDEEAIQMAN 446

Query: 709  DTNAGLAAYVFTTNVQRSWRVSEALEYGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYG 530
            DTNAGLAAY+F+TN++R+WRV+EALEYG+VGVNEG++STEVAPFGGVKQSGLGREGSKYG
Sbjct: 447  DTNAGLAAYIFSTNIKRAWRVTEALEYGIVGVNEGLVSTEVAPFGGVKQSGLGREGSKYG 506

Query: 529  MDEYLEVKYVCLGNM 485
            MDEYLE+KYVCLG+M
Sbjct: 507  MDEYLEMKYVCLGSM 521


>ref|XP_002315079.1| predicted protein [Populus trichocarpa] gi|222864119|gb|EEF01250.1|
            predicted protein [Populus trichocarpa]
          Length = 536

 Score =  827 bits (2137), Expect = 0.0
 Identities = 411/494 (83%), Positives = 456/494 (92%)
 Frame = -2

Query: 1966 RQMSMDTKSAAAQLRSSGLLKTQGLIGGKWIDAYDGKTIKVCDPATGDVIVNVPFMGRRE 1787
            R MSM +++  ++L SSGLLKTQGLI GKW+DA DG TIKV +PATG+V+  VP MG+ E
Sbjct: 40   RHMSMKSENLVSKLTSSGLLKTQGLIDGKWVDANDGDTIKVLNPATGEVVAIVPCMGQSE 99

Query: 1786 TNDAISSAYDTFKAWSRLTANERSKCLRKWYDLLIAHKEELGRLITLEQGKPLKEAMGEV 1607
            TN+AISSAYD F++WS+LTA+ERS+ +RKWYDLLIAHKEELG+LITLEQGKPLKEAMGEV
Sbjct: 100  TNNAISSAYDAFRSWSKLTASERSQRIRKWYDLLIAHKEELGQLITLEQGKPLKEAMGEV 159

Query: 1606 NYGASFIEFYAEEAKRVYGDIIPPTLADRRLFVLKQPVGVVGAITPWNFPLAMITRKVGP 1427
            +YGASFIEFYAEEAKRVYGDIIP TL DRRLFVLKQPVGVVGAITPWNFPLAMITRKVGP
Sbjct: 160  SYGASFIEFYAEEAKRVYGDIIPATLGDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGP 219

Query: 1426 ALACGCTVVIKPSELTPLTALAAVELSLQAGIPPGAVNVVMGNASEIGDTLLESTQVRKI 1247
            ALACGCTVV+KPSELTPLTALAA EL+LQAGIPPG +NVVMG A +IGD LL S +VRKI
Sbjct: 220  ALACGCTVVLKPSELTPLTALAAAELALQAGIPPGVLNVVMGKAPDIGDALLASHEVRKI 279

Query: 1246 TFTGSTAVGKKLMAGAAATVKKVSLELGGNAPCIVFDDADLDVAVKGSIAAKFRNSGQTC 1067
            TFTGSTAVGKKLMAGAA TVK++SLELGGNAPCIVFDDADLDVAVKGS+AAKFRNSGQTC
Sbjct: 280  TFTGSTAVGKKLMAGAAGTVKRLSLELGGNAPCIVFDDADLDVAVKGSLAAKFRNSGQTC 339

Query: 1066 VCANRILVQEGIYEKFANSFASAVQNLQVGNGFMESVTQGPLINEAAVQKVETFIQDAVS 887
            VCANRI+VQEGIY+KFA+SF+ AVQ++QVG+GF E VTQGPLINEAAVQKVE+F+QDA+ 
Sbjct: 340  VCANRIIVQEGIYDKFADSFSKAVQSMQVGDGFSEGVTQGPLINEAAVQKVESFVQDAIF 399

Query: 886  KGAKVKLGGKRHSLGSTFYEPTVISDVNSEMLLSREEVFGPVAPLLRFKTEEEAIQMAND 707
            KGAKV LGGKRHSLG  FYEPT+IS+V   MLLSREEVFGPVAPLLRFKTEEEAI MAN+
Sbjct: 400  KGAKVLLGGKRHSLGMNFYEPTIISNVTEAMLLSREEVFGPVAPLLRFKTEEEAILMANN 459

Query: 706  TNAGLAAYVFTTNVQRSWRVSEALEYGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGM 527
            T AGLAAY+FT NVQRSWRV+EALEYGLVGVNEG+ISTEVAPFGGVKQSGLGREGSKYGM
Sbjct: 460  TKAGLAAYIFTNNVQRSWRVTEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGM 519

Query: 526  DEYLEVKYVCLGNM 485
            DEYLE+KYVCLG+M
Sbjct: 520  DEYLEMKYVCLGDM 533


>ref|XP_003532910.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
            [Glycine max]
          Length = 537

 Score =  822 bits (2122), Expect = 0.0
 Identities = 415/532 (78%), Positives = 463/532 (87%), Gaps = 9/532 (1%)
 Frame = -2

Query: 2053 SMSIAHIALRGYKLLTRPSLDFS---------HSHRFIRQMSMDTKSAAAQLRSSGLLKT 1901
            ++++  +ALR  KLL RP    S          S    R+MS D +S A+QL SSGLL+T
Sbjct: 3    ALNLCRMALRSSKLLYRPYNLLSVQLQMQMQPSSPPLTRKMSTDAQSIASQLNSSGLLRT 62

Query: 1900 QGLIGGKWIDAYDGKTIKVCDPATGDVIVNVPFMGRRETNDAISSAYDTFKAWSRLTANE 1721
            QGLI GKW DAYDGKTIKV +PATG+ +V+V  MG RETNDAIS+AYD + +WS+ TA E
Sbjct: 63   QGLIAGKWSDAYDGKTIKVYNPATGESVVDVACMGGRETNDAISAAYDAYGSWSKTTAAE 122

Query: 1720 RSKCLRKWYDLLIAHKEELGRLITLEQGKPLKEAMGEVNYGASFIEFYAEEAKRVYGDII 1541
            RSK LRKWYDLL+ HKEEL +LITLEQGKPLKE++GE+ YGA FIEF AEEAKR+YGDI+
Sbjct: 123  RSKLLRKWYDLLMVHKEELAQLITLEQGKPLKESVGEIVYGAGFIEFAAEEAKRIYGDIV 182

Query: 1540 PPTLADRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALA 1361
            P   +DRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALA
Sbjct: 183  PAPFSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALA 242

Query: 1360 AVELSLQAGIPPGAVNVVMGNASEIGDTLLESTQVRKITFTGSTAVGKKLMAGAAATVKK 1181
            AVELS+QAGIPPG VNVVMGNA +IGD LL S QVRKITFTGSTAVGKKLMAG+A TVKK
Sbjct: 243  AVELSIQAGIPPGVVNVVMGNAPDIGDALLASPQVRKITFTGSTAVGKKLMAGSAETVKK 302

Query: 1180 VSLELGGNAPCIVFDDADLDVAVKGSIAAKFRNSGQTCVCANRILVQEGIYEKFANSFAS 1001
            VSLELGGNAPCIVFDDADLDVAVKG++AAKFRNSGQTCVCANRI+VQEGIYEKFAN+   
Sbjct: 303  VSLELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRIIVQEGIYEKFANALRD 362

Query: 1000 AVQNLQVGNGFMESVTQGPLINEAAVQKVETFIQDAVSKGAKVKLGGKRHSLGSTFYEPT 821
            AVQN++VG+GF E V+QGPLINEAAV+KVE+ I DA SKGAKV LGGKRHSLG TFYEPT
Sbjct: 363  AVQNMKVGDGFSEGVSQGPLINEAAVKKVESLIHDATSKGAKVILGGKRHSLGLTFYEPT 422

Query: 820  VISDVNSEMLLSREEVFGPVAPLLRFKTEEEAIQMANDTNAGLAAYVFTTNVQRSWRVSE 641
            VISDVNS+M +SREE FGPVAPLLRFKTEEEAI++ANDTNAGL +YVFT ++QRSWRV+E
Sbjct: 423  VISDVNSDMHISREEAFGPVAPLLRFKTEEEAIRIANDTNAGLGSYVFTNSIQRSWRVAE 482

Query: 640  ALEYGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGMDEYLEVKYVCLGNM 485
            ALEYGLVGVNEG+ISTEVAPFGG KQSGLGREGSKYGMDEYLE+KYVC GNM
Sbjct: 483  ALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCFGNM 534


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