BLASTX nr result

ID: Cimicifuga21_contig00003028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003028
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315353.1| predicted protein [Populus trichocarpa] gi|1...    79   2e-12
emb|CAA56654.1| E24 ASN [Spinacia oleracea]                            78   3e-12
ref|XP_002271647.1| PREDICTED: uncharacterized protein LOC100247...    77   4e-12
emb|CBI40202.3| unnamed protein product [Vitis vinifera]               77   4e-12
emb|CAA53243.1| chloroplast outer envelope 24 kD protein (omp24)...    75   2e-11

>ref|XP_002315353.1| predicted protein [Populus trichocarpa] gi|118482795|gb|ABK93315.1|
           unknown [Populus trichocarpa]
           gi|118484482|gb|ABK94116.1| unknown [Populus
           trichocarpa] gi|222864393|gb|EEF01524.1| predicted
           protein [Populus trichocarpa]
          Length = 145

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 50/138 (36%), Positives = 68/138 (49%), Gaps = 4/138 (2%)
 Frame = -2

Query: 863 MADTMKLETKSISTQEEDRKTQNPLFSILNNFHFNFPRFNKT---AEAVPSKEEAVSKVE 693
           MA+T   E   I TQ++  +    LFSI   F    P FNK    A+  P         E
Sbjct: 1   MAET---ENSKIVTQKDSSQKPGNLFSIFPKFELKVPFFNKPVPLAKEEPKIAVVTEGGE 57

Query: 692 PEINTQKPGFVRVPDGKKDFPK-LTLEGDESQEAASGPRNMWQVYALGGFMIGRWLWARW 516
            E   QKP  V  P+ +   P  + +E +E       P  +WQVYALGGF++ +W+WARW
Sbjct: 58  NESGIQKPNIVSFPNTRSLAPSSIEVEVEEGSGRTHNPVIIWQVYALGGFIVLKWIWARW 117

Query: 515 NERKADEANKQQPSGDDE 462
            ER  +E  K+  S DD+
Sbjct: 118 QER--NEKAKKASSDDDQ 133


>emb|CAA56654.1| E24 ASN [Spinacia oleracea]
          Length = 148

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
 Frame = -2

Query: 863 MADTMKLETKSISTQEEDRKTQNPLFSILNNF-HFNFPRFNKTAEAVPSKEEAVSKVEPE 687
           MA+       +    E  R+ QN  F  L+    F    FN       S E++V +V+ E
Sbjct: 1   MAEGQHTTAVTTGNPEASRQEQNNPFFFLSLIPKFLLQPFNNIKNKGDS-EKSVKRVDGE 59

Query: 686 ----INTQKPGFVRVPDGKKDFPKLTLEGDESQEAASGPRNMWQVYALGGFMIGRWLWAR 519
                NT+ P  VR P  + +   L LE +++QE  + P  +WQ+YALGGF++ +W W +
Sbjct: 60  EGSGSNTKTPDVVRFPATQPEVAPLKLENEDAQEDTN-PLILWQIYALGGFIVLKWAWGK 118

Query: 518 WNERKADEANKQQPSGDDEPPPP 450
           W ERKA+  +    SG+D+P PP
Sbjct: 119 WQERKANNGS----SGEDQPQPP 137


>ref|XP_002271647.1| PREDICTED: uncharacterized protein LOC100247238 [Vitis vinifera]
          Length = 132

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
 Frame = -2

Query: 815 EDRKTQNPLFSILNNFHFNFP--RFNKTAEAVPSKEEAVSKVEPEINTQKPGFVRVPDGK 642
           E  K  NP FS+  N   N P  +F          +E   + E E+ ++K   VR  + +
Sbjct: 12  EHPKAPNPFFSLFQNLVKNLPLPKFEAKQRVADRGQEGQGEGEGEVISKKVDVVRFSEKR 71

Query: 641 KDFPK-LTLEGDESQEAASGPRNMWQVYALGGFMIGRWLWARWNERKADE-ANKQQPS-G 471
              P  L LE +ES  ++S P  +WQVYALGGF+I +W WARWNER+  + A+ ++PS G
Sbjct: 72  PIIPPPLKLEAEESDNSSS-PTVLWQVYALGGFIILKWAWARWNERRNKKGASDEEPSVG 130

Query: 470 DD 465
           +D
Sbjct: 131 ED 132


>emb|CBI40202.3| unnamed protein product [Vitis vinifera]
          Length = 125

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
 Frame = -2

Query: 815 EDRKTQNPLFSILNNFHFNFP--RFNKTAEAVPSKEEAVSKVEPEINTQKPGFVRVPDGK 642
           E  K  NP FS+  N   N P  +F          +E   + E E+ ++K   VR  + +
Sbjct: 5   EHPKAPNPFFSLFQNLVKNLPLPKFEAKQRVADRGQEGQGEGEGEVISKKVDVVRFSEKR 64

Query: 641 KDFPK-LTLEGDESQEAASGPRNMWQVYALGGFMIGRWLWARWNERKADE-ANKQQPS-G 471
              P  L LE +ES  ++S P  +WQVYALGGF+I +W WARWNER+  + A+ ++PS G
Sbjct: 65  PIIPPPLKLEAEESDNSSS-PTVLWQVYALGGFIILKWAWARWNERRNKKGASDEEPSVG 123

Query: 470 DD 465
           +D
Sbjct: 124 ED 125


>emb|CAA53243.1| chloroplast outer envelope 24 kD protein (omp24) [Spinacia
           oleracea]
          Length = 148

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
 Frame = -2

Query: 863 MADTMKLETKSISTQEEDRKTQNPLFSILNNF-HFNFPRFNKTAEAVPSKEEAVSKVEPE 687
           MA+       +    E  R+ QN  F  L+    F    FN       S E++V +V+ E
Sbjct: 1   MAEGQHTTAVTTGNPEASRQEQNNPFFFLSLIPKFLLQPFNNIKNKGDS-EKSVKRVDGE 59

Query: 686 IN----TQKPGFVRVPDGKKDFPKLTLEGDESQEAASGPRNMWQVYALGGFMIGRWLWAR 519
                 T+ P  VR P  + +   L LE +++QE  + P  +WQ+YALGGF++ +W W +
Sbjct: 60  EGSGSYTKTPDVVRFPATQPEVAPLKLENEDAQEDTN-PLILWQIYALGGFIVLKWAWGK 118

Query: 518 WNERKADEANKQQPSGDDEPPPP 450
           W ERKA+  +    SG+D+P PP
Sbjct: 119 WQERKANNGS----SGEDQPQPP 137


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