BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003011
         (2430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   478   e-132
ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   477   e-132
ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...   476   e-132
ref|XP_002516614.1| ring finger protein, putative [Ricinus commu...   476   e-132
ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...   473   e-130

>ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
          Length = 424

 Score =  478 bits (1229), Expect = e-132
 Identities = 249/426 (58%), Positives = 295/426 (69%), Gaps = 6/426 (1%)
 Frame = +3

Query: 504  MDVSPLEPHSEGQTDRHPLLMERLENRKVSEHIIDITRGGVAXXXXXXXXXXXXXXXXXX 683
            MDV+ L  +S  QTD+HPLLME+ E     +H+IDITR G A                  
Sbjct: 1    MDVTSLGSNSNTQTDQHPLLMEQPETHNGHQHVIDITRNGEALTTSSRNDQYSEMHLPQN 60

Query: 684  XXXXXXNTRLAAXXXXXXXXXXXXXXXXXFIRRGDGYGRRHRSPLNSGLWISIELVVTVC 863
                  + + ++                  +RRG+GYG   RSPLNSGLWIS+ELVVTV 
Sbjct: 61   EDQAAGDAQNSSHQTSSSSAPRLNSRNSASLRRGEGYGHHGRSPLNSGLWISVELVVTVS 120

Query: 864  QIIASVVVLSLSRNEKPQAPLFAWIVGYASGCVATLPLLYWRYRHRNNQRTEQESAQPRQ 1043
            QIIAS+VVLSLSRNE PQAPLFAWIVGYASGCVATLP+LYWR+R+RN Q  EQ+++Q  Q
Sbjct: 121  QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRN-QSNEQDTSQASQ 179

Query: 1044 ----SNPPEPTPYTAISISRSSEEGDPHASATATRNGIXXXXXXXXXXXXXDHLKMALDC 1211
                SNPP+ + Y +I +S  S+E + HA+ +A+RN I             DH KMALDC
Sbjct: 180  GSSGSNPPDRS-YNSIHVSHVSDEENGHATRSASRNTIMPGAFTSRLNGLVDHFKMALDC 238

Query: 1212 FFAVWFVVGNVWIFGGHSSSAGAPNLYRLCIVFLTFSCIGYAMPFILCATXXXXXXXXXX 1391
            FFAVWFVVGNVWIFGGH+S + AP LYRLCIVFLTFSCIGYAMPFILCAT          
Sbjct: 239  FFAVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS 298

Query: 1392 XXGFREDLTHTRGATPESISALPTYKFKLK--KNGSDGEINTDGAGEGGVIAAGTEKERV 1565
              G RED +  RGAT ESI+ALP +KFKLK  +NG D ++N     EGG++AAGTEKER+
Sbjct: 299  VLGIREDFSQNRGATVESINALPIFKFKLKNNENGDDQDVNA-AIDEGGILAAGTEKERM 357

Query: 1566 ISGEDAVCCICLAKYADNDELRELPCNHFFHMECVDKWLKINALCPLCKCEVGENSEGTP 1745
            ISGEDAVCCICLAKYAD+DELRELPC+HFFH+ CVDKWLKINA CPLCK EVG ++ G+P
Sbjct: 358  ISGEDAVCCICLAKYADDDELRELPCSHFFHVMCVDKWLKINATCPLCKNEVGTSNGGSP 417

Query: 1746 SAANSS 1763
            SA NSS
Sbjct: 418  SAWNSS 423


>ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
          Length = 419

 Score =  477 bits (1228), Expect = e-132
 Identities = 249/422 (59%), Positives = 294/422 (69%), Gaps = 6/422 (1%)
 Frame = +3

Query: 504  MDVSPLEPHSEGQTDRHPLLMERLENRKVSEHIIDITRGGVAXXXXXXXXXXXXXXXXXX 683
            MDV+ L  +S  QTD+HPLLME+ E R   +H+IDITR G A                  
Sbjct: 1    MDVTSLGSNSNTQTDQHPLLMEQPETRNGHQHVIDITRNGEALTTSYRNDQHSEMHLTQN 60

Query: 684  XXXXXXNTRLAAXXXXXXXXXXXXXXXXXFIRRGDGYGRRHRSPLNSGLWISIELVVTVC 863
                  + + ++                  +RRGDGYG R RSPLNSGLWIS+ELVVTV 
Sbjct: 61   QDQPAGDAQDSSHQTTSSSAPRLNSRNSASLRRGDGYGHRGRSPLNSGLWISVELVVTVS 120

Query: 864  QIIASVVVLSLSRNEKPQAPLFAWIVGYASGCVATLPLLYWRYRHRNNQRTEQESAQPRQ 1043
            QIIAS+VVLSLSRNE PQAPLFAWIVGY SGCVATLP+LYWR+R+RN Q  EQ+++Q  Q
Sbjct: 121  QIIASIVVLSLSRNENPQAPLFAWIVGYGSGCVATLPILYWRFRNRN-QSNEQDTSQASQ 179

Query: 1044 ----SNPPEPTPYTAISISRSSEEGDPHASATATRNGIXXXXXXXXXXXXXDHLKMALDC 1211
                SNPP+ + YT+I +S  S+E + HA+ +A+RN I             DH KMALDC
Sbjct: 180  GSSGSNPPDRS-YTSIYVSHVSDEENGHATQSASRNTIMPGAFTSRLNGLVDHFKMALDC 238

Query: 1212 FFAVWFVVGNVWIFGGHSSSAGAPNLYRLCIVFLTFSCIGYAMPFILCATXXXXXXXXXX 1391
            FFAVWFVVGNVWIFGGH+S + AP LYRLCIVFLTFSCIGYAMPFILCAT          
Sbjct: 239  FFAVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS 298

Query: 1392 XXGFREDLTHTRGATPESISALPTYKFKLK--KNGSDGEINTDGAGEGGVIAAGTEKERV 1565
              G RED +  RGAT ESI+ALP +KFKLK  +NG D + N+    EGG++AAGTEKER+
Sbjct: 299  VLGIREDFSQNRGATVESINALPIFKFKLKNNENGDDQDANS-AIDEGGILAAGTEKERM 357

Query: 1566 ISGEDAVCCICLAKYADNDELRELPCNHFFHMECVDKWLKINALCPLCKCEVGENSEGTP 1745
            ISGEDAVCCICLAKYAD+DELRELPC+H FH+ECVDKWLKINA CPLCK EVG ++ G+P
Sbjct: 358  ISGEDAVCCICLAKYADDDELRELPCSHVFHVECVDKWLKINATCPLCKNEVGTSNGGSP 417

Query: 1746 SA 1751
            SA
Sbjct: 418  SA 419


>ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
            vinifera] gi|297743322|emb|CBI36189.3| unnamed protein
            product [Vitis vinifera]
          Length = 416

 Score =  476 bits (1226), Expect = e-132
 Identities = 259/448 (57%), Positives = 290/448 (64%), Gaps = 4/448 (0%)
 Frame = +3

Query: 504  MDVSPLEPHSEGQTDRHPLLMERLENRKVSEHIIDITRGGVAXXXXXXXXXXXXXXXXXX 683
            M +  LEPHS  QT ++PLLMER EN    EHIIDITR   A                  
Sbjct: 1    MAIPSLEPHSGSQTYKYPLLMERTENHGDREHIIDITRNDDASSSSSHDDHHPVMNPPQH 60

Query: 684  XXXXXXNTRLAAXXXXXXXXXXXXXXXXXFIRRGDGYGRRHRSPLNSGLWISIELVVTVC 863
                  +T+                    F+RR DGY RR RSPLNSGLWIS+ELVVTV 
Sbjct: 61   EERPSSSTQTPTNQTSSNRLNSRNSS---FMRRSDGYSRRRRSPLNSGLWISVELVVTVS 117

Query: 864  QIIASVVVLSLSRNEKPQAPLFAWIVGYASGCVATLPLLYWRYRHRNNQRTEQESAQPRQ 1043
            QIIAS+VVLSLSR+E P+APLFAW+VGYASGC ATLP+LYWRYR RN             
Sbjct: 118  QIIASIVVLSLSRHENPRAPLFAWVVGYASGCFATLPILYWRYRTRNQ------------ 165

Query: 1044 SNPPEPTPYTAISISRSSEEGDPHASATATRNGIXXXXXXXXXXXXXDHLKMALDCFFAV 1223
                       IS++++SE      +  ATR                DH KMALDCFFAV
Sbjct: 166  ----------TISVNQASE-----TAGAATRRSRFVGIFRMRFSGMVDHFKMALDCFFAV 210

Query: 1224 WFVVGNVWIFGGHSSSAGAPNLYRLCIVFLTFSCIGYAMPFILCATXXXXXXXXXXXXGF 1403
            WFVVGNVWIFGGHSS + AP LYRLCIVFLTFSCIGYAMPFILCAT            GF
Sbjct: 211  WFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGF 270

Query: 1404 REDLTHTRGATPESISALPTYKFKLKKNG--SDGEINTDGAGEGGVIAAGTEKERVISGE 1577
            REDL+ TRGA PESI ALPTYKFKLKKNG   D E+N+ GAGEGGV+AAGTEKER ISGE
Sbjct: 271  REDLSQTRGAAPESIDALPTYKFKLKKNGDVDDQEVNS-GAGEGGVLAAGTEKERAISGE 329

Query: 1578 DAVCCICLAKYADNDELRELPCNHFFHMECVDKWLKINALCPLCKCEVGENSEGTPSAAN 1757
            DAVCCICLAKYADN+ELRELPC HFFH+ECVDKWLKINALCPLCK EVG  S  +P+A +
Sbjct: 330  DAVCCICLAKYADNEELRELPCCHFFHVECVDKWLKINALCPLCKFEVGGTSGASPNATS 389

Query: 1758 SSHRSAGERRVGNESAAG--DVYGSTVF 1835
            +S     ER  GN S  G   +YG+T+F
Sbjct: 390  TSEHQR-ERPTGNASTEGGSSIYGTTMF 416


>ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
            gi|223544434|gb|EEF45955.1| ring finger protein, putative
            [Ricinus communis]
          Length = 437

 Score =  476 bits (1226), Expect = e-132
 Identities = 262/439 (59%), Positives = 299/439 (68%), Gaps = 4/439 (0%)
 Frame = +3

Query: 504  MDVSPLEPHSEGQTDRHPLLMERLENRKVSEHIIDITRGGVAXXXXXXXXXXXXXXXXXX 683
            MDVS  E HSE  TD  PLLME+  +   SEHIIDI R   +                  
Sbjct: 1    MDVSSTEQHSESLTDTCPLLMEQSNSINSSEHIIDIPRSSDSSPSTSHDRTTSGLEASSN 60

Query: 684  XXXXXXNTRLAAXXXXXXXXXXXXXXXXX-FIRRGDGYGRRHRSPLNSGLWISIELVVTV 860
                  + R  +                   IRRG+   RR RSPLNSGLWIS+ELV+TV
Sbjct: 61   EDRPTTSVRTPSISHLSTGTSNGSNTRNSSLIRRGEA--RRRRSPLNSGLWISVELVLTV 118

Query: 861  CQIIASVVVLSLSRNEKPQAPLFAWIVGYASGCVATLPLLYWRYRHRNNQRTEQESAQPR 1040
             QIIAS+VVLSLSR+E P+APLFAWIVGYASGCVATLPLLYWRYRHRN Q TEQE+AQPR
Sbjct: 119  SQIIASIVVLSLSRHEHPRAPLFAWIVGYASGCVATLPLLYWRYRHRN-QVTEQEAAQPR 177

Query: 1041 QSNP-PEPTPYTAISISRSSEEGDPHASATATRNGIXXXXXXXXXXXXXDHLKMALDCFF 1217
            QS+    P    +ISI+R+SE  D  +S+T++R G              ++ KMALDCFF
Sbjct: 178  QSSHFSVPGDSISISITRNSEVVDRRSSSTSSRGGQNSGALNARLKTLVEYFKMALDCFF 237

Query: 1218 AVWFVVGNVWIFGGHSSSAGAPNLYRLCIVFLTFSCIGYAMPFILCATXXXXXXXXXXXX 1397
            AVWFVVGNVWIFGGHSS+  APN+YRLCIVFLTFSCIGYAMPFILCAT            
Sbjct: 238  AVWFVVGNVWIFGGHSSATEAPNMYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISLL 297

Query: 1398 GFREDLTHTRGATPESISALPTYKFKLKKN--GSDGEINTDGAGEGGVIAAGTEKERVIS 1571
            GFREDL  TRGAT ESI ALPTYKFKL K+  G D + N+ GAG+GGV+AAGTE ER IS
Sbjct: 298  GFREDLGQTRGATSESIDALPTYKFKLNKHRTGDDRDSNS-GAGDGGVVAAGTEHERFIS 356

Query: 1572 GEDAVCCICLAKYADNDELRELPCNHFFHMECVDKWLKINALCPLCKCEVGENSEGTPSA 1751
            GEDAVCCICLAKYA+NDELRELPC+HFFH +CVDKWLKINA CPLCK EVGE+  G+ +A
Sbjct: 357  GEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKTEVGESVMGSLTA 416

Query: 1752 ANSSHRSAGERRVGNESAA 1808
             N+  R   E RVGN  A+
Sbjct: 417  TNTGQRQV-ESRVGNGLAS 434


>ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
            vinifera]
          Length = 421

 Score =  473 bits (1217), Expect = e-130
 Identities = 261/421 (61%), Positives = 290/421 (68%), Gaps = 6/421 (1%)
 Frame = +3

Query: 504  MDVSPLEPHSEGQTDRHPLLMERLENRKVSEHIIDITRGGVAXXXXXXXXXXXXXXXXXX 683
            M +  LE HS+ Q+D +PLLME+  N+  +EHIIDITR G A                  
Sbjct: 1    MAIPSLELHSKSQSDIYPLLMEQPGNQIDTEHIIDITRSGDASSSNSSNDGPSTSLDQLQ 60

Query: 684  XXXXXXNTRLAAXXXXXXXXXXXXXXXXXFIRRGDGYGRRHRSPLNSGLWISIELVVTVC 863
                  ++                     F RR D   RR RSPLNSGLWISIEL +TV 
Sbjct: 61   HDDRPASSARVPISQPSFSSSNVSNSRNSFRRRADA--RRRRSPLNSGLWISIELALTVS 118

Query: 864  QIIASVVVLSLSRNEKPQAPLFAWIVGYASGCVATLPLLYWRYRHRNNQRTEQESAQPRQ 1043
            QIIASVVVLSLSR+E P APLF WIVGYASGCVATLP+LYWR+RHRN Q  EQESAQ RQ
Sbjct: 119  QIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRN-QGHEQESAQSRQ 177

Query: 1044 ----SNPPEPTPYTAISISRSSEEGDPHASATATRNGIXXXXXXXXXXXXXDHLKMALDC 1211
                SN P   P  ++S++ +SEE D   S  ATRN               ++ KMALDC
Sbjct: 178  VSFHSNLPGG-PTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVEYFKMALDC 236

Query: 1212 FFAVWFVVGNVWIFGGHSSSAGAPNLYRLCIVFLTFSCIGYAMPFILCATXXXXXXXXXX 1391
            FFAVWFVVGNVWIFGGHSSS+ APNLYRLCIVFLTFSCIGYAMPFILCAT          
Sbjct: 237  FFAVWFVVGNVWIFGGHSSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS 296

Query: 1392 XXGFREDLTHTRGATPESISALPTYKFKLKK--NGSDGEINTDGAGEGGVIAAGTEKERV 1565
              GFREDLT TRGAT ESI+ALPTYKFKLKK  NG D E N+ GAGEGGV+AAGTE+ERV
Sbjct: 297  ILGFREDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNS-GAGEGGVVAAGTERERV 355

Query: 1566 ISGEDAVCCICLAKYADNDELRELPCNHFFHMECVDKWLKINALCPLCKCEVGENSEGTP 1745
            ISGEDAVCCICLAKYA+NDELRELPC+HFFH ECVDKWLKINALCPLCK EVGE+  G+ 
Sbjct: 356  ISGEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINALCPLCKREVGESFLGSL 415

Query: 1746 S 1748
            S
Sbjct: 416  S 416