BLASTX nr result
ID: Cimicifuga21_contig00002498
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00002498
(852 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003556293.1| PREDICTED: probable U3 small nucleolar RNA-a... 229 6e-58
ref|XP_003536295.1| PREDICTED: probable U3 small nucleolar RNA-a... 228 1e-57
ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-a... 224 2e-56
emb|CBI40185.3| unnamed protein product [Vitis vinifera] 224 2e-56
ref|XP_002315346.1| predicted protein [Populus trichocarpa] gi|2... 221 1e-55
>ref|XP_003556293.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
7-like [Glycine max]
Length = 535
Score = 229 bits (584), Expect = 6e-58
Identities = 119/196 (60%), Positives = 143/196 (72%), Gaps = 10/196 (5%)
Frame = +2
Query: 2 LACGSQSNVQILGDLAGTMKHKSYMKHQMVKGRQVEKLLFRPYEDVLLIGHSEGWSSILI 181
LACG+ S +Q+L D++GT + YM H MVKG Q+ KL+FRPYEDVL IGHS GWSSILI
Sbjct: 333 LACGNGSLIQVLRDVSGTQNYSKYMTHSMVKGYQIGKLVFRPYEDVLGIGHSMGWSSILI 392
Query: 182 PGSGEPNFDSWVANPFETSKQRREREVHSLLDKLPPETIMLDPTEIGTV--LKSKPTKQE 355
PG+GEPNFDSWVANPFETSKQRRE+E+ SLLDKLPPETIMLDP++IGTV + KPTKQE
Sbjct: 393 PGAGEPNFDSWVANPFETSKQRREKEIRSLLDKLPPETIMLDPSKIGTVKPRREKPTKQE 452
Query: 356 KEAEIEA--------VXXXXXXXXXXXXXMTAKRKEMIANAKRSFLEQQIKVEERVARKK 511
+EAEIEA K++E +A KR +LEQ+I+ EE ++RKK
Sbjct: 453 REAEIEADVEAAKGKKLKKKTKGRNKPGKRVQKKQEAVARVKRPYLEQKIQEEESISRKK 512
Query: 512 QRRIEQVELPMSLQRF 559
Q+ E VELP SLQRF
Sbjct: 513 QKTREGVELPKSLQRF 528
>ref|XP_003536295.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
7-like [Glycine max]
Length = 535
Score = 228 bits (581), Expect = 1e-57
Identities = 118/197 (59%), Positives = 143/197 (72%), Gaps = 10/197 (5%)
Frame = +2
Query: 2 LACGSQSNVQILGDLAGTMKHKSYMKHQMVKGRQVEKLLFRPYEDVLLIGHSEGWSSILI 181
LACG+ S +QIL D++GT + YM H MVKG Q+ KL+FRPYEDVL IGHS GWSSIL
Sbjct: 333 LACGNGSLIQILRDVSGTQNYSKYMTHSMVKGYQIGKLVFRPYEDVLGIGHSMGWSSILT 392
Query: 182 PGSGEPNFDSWVANPFETSKQRREREVHSLLDKLPPETIMLDPTEIGTV--LKSKPTKQE 355
PG+GEPNFDSWVANPFETSKQRRE+E+ SLLDKLPPETIMLDP++IGTV + +PTKQE
Sbjct: 393 PGAGEPNFDSWVANPFETSKQRREKEIRSLLDKLPPETIMLDPSKIGTVKPRRERPTKQE 452
Query: 356 KEAEIEA--------VXXXXXXXXXXXXXMTAKRKEMIANAKRSFLEQQIKVEERVARKK 511
+EAEIEA K++E ++ KR +LEQ+I+ EE ++RKK
Sbjct: 453 REAEIEAGVEAAKGMKLKKKTKGRNKPGKRVQKKQEAVSRVKRPYLEQKIQEEESISRKK 512
Query: 512 QRRIEQVELPMSLQRFA 562
Q+ E VELP SLQRFA
Sbjct: 513 QKTSEDVELPKSLQRFA 529
>ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-associated protein 7
[Vitis vinifera]
Length = 610
Score = 224 bits (570), Expect = 2e-56
Identities = 121/199 (60%), Positives = 143/199 (71%), Gaps = 12/199 (6%)
Frame = +2
Query: 2 LACGSQSNVQILGDLAGTMKHKSYMKHQMVKGRQVEKLLFRPYEDVLLIGHSEGWSSILI 181
LA G+ S VQILGD +GT + YM H M KG Q+ K+LFRPYEDVL IGHS GWS ILI
Sbjct: 407 LATGTGSFVQILGDFSGTENYSRYMGHSMAKGYQIGKVLFRPYEDVLSIGHSMGWSCILI 466
Query: 182 PGSGEPNFDSWVANPFETSKQRREREVHSLLDKLPPETIMLDPTEIGTVLKS----KPTK 349
PGSGEPNFDSWVANPFETSKQRRE+EVHSLLDKLPPETIMLDPT+IGTV +S KPTK
Sbjct: 467 PGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLDPTKIGTVRQSRKREKPTK 526
Query: 350 QEKEAEIEAV--------XXXXXXXXXXXXXMTAKRKEMIANAKRSFLEQQIKVEERVAR 505
QE++AE+EA KR+E +A AK+ FLE+Q++ EE ++
Sbjct: 527 QERKAEMEAAVEDAKSIPLRKKMKGKNKPSKKVKKREEAVARAKKPFLERQME-EENLST 585
Query: 506 KKQRRIEQVELPMSLQRFA 562
KKQ+ ++ELP SLQRFA
Sbjct: 586 KKQKISGEIELPKSLQRFA 604
>emb|CBI40185.3| unnamed protein product [Vitis vinifera]
Length = 536
Score = 224 bits (570), Expect = 2e-56
Identities = 121/199 (60%), Positives = 143/199 (71%), Gaps = 12/199 (6%)
Frame = +2
Query: 2 LACGSQSNVQILGDLAGTMKHKSYMKHQMVKGRQVEKLLFRPYEDVLLIGHSEGWSSILI 181
LA G+ S VQILGD +GT + YM H M KG Q+ K+LFRPYEDVL IGHS GWS ILI
Sbjct: 333 LATGTGSFVQILGDFSGTENYSRYMGHSMAKGYQIGKVLFRPYEDVLSIGHSMGWSCILI 392
Query: 182 PGSGEPNFDSWVANPFETSKQRREREVHSLLDKLPPETIMLDPTEIGTVLKS----KPTK 349
PGSGEPNFDSWVANPFETSKQRRE+EVHSLLDKLPPETIMLDPT+IGTV +S KPTK
Sbjct: 393 PGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLDPTKIGTVRQSRKREKPTK 452
Query: 350 QEKEAEIEAV--------XXXXXXXXXXXXXMTAKRKEMIANAKRSFLEQQIKVEERVAR 505
QE++AE+EA KR+E +A AK+ FLE+Q++ EE ++
Sbjct: 453 QERKAEMEAAVEDAKSIPLRKKMKGKNKPSKKVKKREEAVARAKKPFLERQME-EENLST 511
Query: 506 KKQRRIEQVELPMSLQRFA 562
KKQ+ ++ELP SLQRFA
Sbjct: 512 KKQKISGEIELPKSLQRFA 530
>ref|XP_002315346.1| predicted protein [Populus trichocarpa] gi|222864386|gb|EEF01517.1|
predicted protein [Populus trichocarpa]
Length = 537
Score = 221 bits (564), Expect = 1e-55
Identities = 112/199 (56%), Positives = 144/199 (72%), Gaps = 12/199 (6%)
Frame = +2
Query: 2 LACGSQSNVQILGDLAGTMKHKSYMKHQMVKGRQVEKLLFRPYEDVLLIGHSEGWSSILI 181
LA G+ S VQ+ GD +G+ + +M H +VKG Q+ K+ FRPYEDVL IGHS GWSSILI
Sbjct: 333 LAAGTGSFVQVFGDFSGSRNYSRHMGHSIVKGYQIGKVAFRPYEDVLGIGHSTGWSSILI 392
Query: 182 PGSGEPNFDSWVANPFETSKQRREREVHSLLDKLPPETIMLDPTEIGTV----LKSKPTK 349
PGSGEPNFD+W+ANPFET+KQRRE+E+HSLLDKLPPETIMLDP++IGTV K KPTK
Sbjct: 393 PGSGEPNFDTWLANPFETTKQRREKEIHSLLDKLPPETIMLDPSKIGTVKSAKKKEKPTK 452
Query: 350 QEKEAEIEA--------VXXXXXXXXXXXXXMTAKRKEMIANAKRSFLEQQIKVEERVAR 505
+E EA++EA + K+KE++ AK+ FL+QQ+K EE+VA+
Sbjct: 453 KEMEADMEAAVEAAKGTAIKNKTKGKNKPSKIAVKKKEIVVRAKKPFLDQQMKEEEKVAK 512
Query: 506 KKQRRIEQVELPMSLQRFA 562
KKQ+ E++ LP +LQRFA
Sbjct: 513 KKQKISEEISLPTALQRFA 531