BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002496
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]     129   1e-27
ref|XP_002270166.1| PREDICTED: upstream activation factor subuni...   127   2e-27
ref|XP_002523973.1| brg-1 associated factor, putative [Ricinus c...   125   1e-26
ref|XP_002270707.1| PREDICTED: upstream activation factor subuni...   124   2e-26
ref|XP_003537709.1| PREDICTED: upstream activation factor subuni...   118   1e-24

>gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]
          Length = 148

 Score =  129 bits (323), Expect = 1e-27
 Identities = 75/141 (53%), Positives = 88/141 (62%), Gaps = 3/141 (2%)
 Frame = +2

Query: 125 NPKTKMSSSSRVFRG-CRALMAASRLSAKKSTDXXXXXXXXXXXXXXXXXNPTDAAA--R 295
           NP+  M+SSSR+F   CR LMAA++ SA K+                     T AA   R
Sbjct: 22  NPRKTMASSSRIFGNYCRTLMAAAKTSAGKTPPA----------------TTTTAAGKGR 65

Query: 296 SAGIHKVKPISPALGKFLGLPEVSRADATKKIWEYIKKNNLQNPDNKRIILCDEKLKTIF 475
           S GI K +PISPAL KF+G  E+SR DA KKIW+YIK NNLQNP NK+ I CD+ LKTIF
Sbjct: 66  SKGILKPQPISPALQKFVGTSEISRTDAVKKIWDYIKTNNLQNPANKKEINCDDMLKTIF 125

Query: 476 EGKDNVGMLEVGKFLSPHFVK 538
            GKD VG LE+ K LS HF K
Sbjct: 126 AGKDKVGFLEIAKLLSFHFQK 146


>ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera] gi|147798865|emb|CAN68050.1| hypothetical
           protein VITISV_015104 [Vitis vinifera]
           gi|296090194|emb|CBI40013.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  127 bits (320), Expect = 2e-27
 Identities = 70/129 (54%), Positives = 83/129 (64%), Gaps = 3/129 (2%)
 Frame = +2

Query: 161 FRGCRALMAASRLSAKKSTDXXXXXXXXXXXXXXXXXNPTDAAA---RSAGIHKVKPISP 331
           F+  R L+AA+R S+  +                    P  AA    RS GI K  P+SP
Sbjct: 9   FKNSRVLLAAARSSSSPAAATKKTPAP-----------PRTAAKGPPRSGGITKPVPVSP 57

Query: 332 ALGKFLGLPEVSRADATKKIWEYIKKNNLQNPDNKRIILCDEKLKTIFEGKDNVGMLEVG 511
           AL KFLG+PE SRA+A KKIWE+IK NNLQNP NKR ILCDEKLK++FEGKD VG LE+G
Sbjct: 58  ALRKFLGVPEASRAEAVKKIWEHIKLNNLQNPTNKREILCDEKLKSVFEGKDKVGFLEIG 117

Query: 512 KFLSPHFVK 538
           K LS HF+K
Sbjct: 118 KLLSHHFIK 126


>ref|XP_002523973.1| brg-1 associated factor, putative [Ricinus communis]
           gi|223536700|gb|EEF38341.1| brg-1 associated factor,
           putative [Ricinus communis]
          Length = 134

 Score =  125 bits (314), Expect = 1e-26
 Identities = 67/131 (51%), Positives = 83/131 (63%), Gaps = 2/131 (1%)
 Frame = +2

Query: 152 SRVFRGCRALMAASR-LSAKKSTDXXXXXXXXXXXXXXXXXNPTDAAARSAGIHKVKPIS 328
           SRVFRG RAL+A ++  +A  +                    P D   R+ GI K  P+S
Sbjct: 2   SRVFRGYRALLAPTKSAAAAAAAAAAPSKSTATKKSAAAAVKPKDKPVRATGILKAAPVS 61

Query: 329 PALGKFLG-LPEVSRADATKKIWEYIKKNNLQNPDNKRIILCDEKLKTIFEGKDNVGMLE 505
           PAL +FLG +PE SR D  KKIW++IK +NLQNP NK+ I CDEKLKTIF+GK+ VG LE
Sbjct: 62  PALSEFLGGVPEASRTDVVKKIWDHIKLHNLQNPTNKKEIFCDEKLKTIFDGKEKVGFLE 121

Query: 506 VGKFLSPHFVK 538
           +GK LS HFVK
Sbjct: 122 IGKLLSRHFVK 132


>ref|XP_002270707.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera] gi|296085458|emb|CBI29190.3| unnamed protein
           product [Vitis vinifera]
          Length = 115

 Score =  124 bits (312), Expect = 2e-26
 Identities = 67/130 (51%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
 Frame = +2

Query: 152 SRVFRGCRALMAASRLSAKKSTDXXXXXXXXXXXXXXXXXNPTDAAARSAGIHKVKPISP 331
           SRV  GCRALM A++ +A  +T+                   T    +  GI K  P+SP
Sbjct: 3   SRVLGGCRALMEAAKANANANTN-------------------TKVIRQGGGITKPVPVSP 43

Query: 332 ALGKFLG-LPEVSRADATKKIWEYIKKNNLQNPDNKRIILCDEKLKTIFEGKDNVGMLEV 508
            LGKFLG +P+ SR+ A KK+WE+IK +NLQNP NK+ I CDEKLKTIF+GKD VG LE+
Sbjct: 44  QLGKFLGGVPQASRSLAIKKVWEHIKLHNLQNPTNKKEICCDEKLKTIFDGKDKVGFLEI 103

Query: 509 GKFLSPHFVK 538
            K LSPHFVK
Sbjct: 104 AKLLSPHFVK 113


>ref|XP_003537709.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
           max]
          Length = 132

 Score =  118 bits (296), Expect = 1e-24
 Identities = 67/133 (50%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
 Frame = +2

Query: 146 SSSRVFRGC--RALMAASRLSAKKSTDXXXXXXXXXXXXXXXXXNPTDAAARSAGIHKVK 319
           +S+RVF     RA MAA    A KS+                   P      ++GI KV 
Sbjct: 2   ASARVFGAIAGRAFMAA----ASKSSAKKKPVPSGGAAAKAAVKKPAAPRTTNSGIQKVV 57

Query: 320 PISPALGKFLGLPEVSRADATKKIWEYIKKNNLQNPDNKRIILCDEKLKTIFEGKDNVGM 499
           P+S  LG FLG P+VSR DA KK+W YIK  NLQNP NK+ I CDEKLKTIFEGKD VG 
Sbjct: 58  PVSSELGDFLGAPQVSRTDAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFEGKDKVGF 117

Query: 500 LEVGKFLSPHFVK 538
            E+ K LS HFVK
Sbjct: 118 TEIAKLLSSHFVK 130