BLASTX nr result

ID: Cimicifuga21_contig00002495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002495
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277247.1| PREDICTED: RPM1-interacting protein 4 [Vitis...   123   3e-26
ref|XP_003525623.1| PREDICTED: uncharacterized protein LOC100526...   106   4e-21
gb|ACU15988.1| unknown [Glycine max]                                  105   1e-20
ref|XP_003550860.1| PREDICTED: RPM1-interacting protein 4-like [...   102   8e-20
ref|XP_003634735.1| PREDICTED: RPM1-interacting protein 4-like [...   101   2e-19

>ref|XP_002277247.1| PREDICTED: RPM1-interacting protein 4 [Vitis vinifera]
           gi|297733635|emb|CBI14882.3| unnamed protein product
           [Vitis vinifera]
          Length = 74

 Score =  123 bits (309), Expect = 3e-26
 Identities = 58/74 (78%), Positives = 63/74 (85%), Gaps = 2/74 (2%)
 Frame = +1

Query: 136 MASQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNA--NVTSPRKTEDNYQRNE 309
           MASQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNA  NV SPR+  + Y++NE
Sbjct: 1   MASQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNAAGNVASPRRNGNGYKQNE 60

Query: 310 EPQSRTKRKWFCCG 351
           +     KRKWFCCG
Sbjct: 61  DYHYSPKRKWFCCG 74


>ref|XP_003525623.1| PREDICTED: uncharacterized protein LOC100526954 [Glycine max]
          Length = 72

 Score =  106 bits (265), Expect = 4e-21
 Identities = 51/74 (68%), Positives = 58/74 (78%), Gaps = 2/74 (2%)
 Frame = +1

Query: 136 MASQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNANVTSPRKTEDNYQRN--E 309
           MASQ+ GRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT  N  +PR+++  ++     
Sbjct: 1   MASQENGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT--NTATPRRSDPVFKNENYN 58

Query: 310 EPQSRTKRKWFCCG 351
            PQ   KRKWFCCG
Sbjct: 59  TPQYSGKRKWFCCG 72


>gb|ACU15988.1| unknown [Glycine max]
          Length = 72

 Score =  105 bits (261), Expect = 1e-20
 Identities = 50/74 (67%), Positives = 58/74 (78%), Gaps = 2/74 (2%)
 Frame = +1

Query: 136 MASQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNANVTSPRKTEDNYQRN--E 309
           MASQ+ GRPLPKFGEWDVNNPASAEGFTVIFNKARDE+KT  N  +PR+++  ++     
Sbjct: 1   MASQENGRPLPKFGEWDVNNPASAEGFTVIFNKARDEEKT--NTATPRRSDPVFKNENYN 58

Query: 310 EPQSRTKRKWFCCG 351
            PQ   KRKWFCCG
Sbjct: 59  TPQYSGKRKWFCCG 72


>ref|XP_003550860.1| PREDICTED: RPM1-interacting protein 4-like [Glycine max]
          Length = 75

 Score =  102 bits (254), Expect = 8e-20
 Identities = 51/73 (69%), Positives = 54/73 (73%), Gaps = 4/73 (5%)
 Frame = +1

Query: 145 QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTN-ANVTSPRKTEDNYQRNE---E 312
           Q+ GRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTN A  T   +  D   +NE    
Sbjct: 3   QENGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNTATATPTPRRSDPVFKNENYNN 62

Query: 313 PQSRTKRKWFCCG 351
           PQ   KRKWFCCG
Sbjct: 63  PQYSGKRKWFCCG 75


>ref|XP_003634735.1| PREDICTED: RPM1-interacting protein 4-like [Vitis vinifera]
           gi|296089934|emb|CBI39753.3| unnamed protein product
           [Vitis vinifera]
          Length = 77

 Score =  101 bits (251), Expect = 2e-19
 Identities = 44/67 (65%), Positives = 50/67 (74%)
 Frame = +1

Query: 148 DRGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNANVTSPRKTEDNYQRNEEPQSRT 327
           D GRPLPKFGEWDVN+PASAEGFTVIFNKARDEK+T     SP   E+N ++  EP    
Sbjct: 3   DNGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKRTGGQPESPANVENNVKQGVEPSKPQ 62

Query: 328 KRKWFCC 348
            +KWFCC
Sbjct: 63  TKKWFCC 69


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