BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002488
         (1931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]   401   e-109
ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   400   e-109
ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   384   e-104
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   381   e-103
ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   374   e-101

>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score =  401 bits (1031), Expect = e-109
 Identities = 213/334 (63%), Positives = 238/334 (71%), Gaps = 2/334 (0%)
 Frame = +2

Query: 239  ATASSYWCYSCSRFVRVETRDPIVCPDCEGGFVEEIDNPPRSANLEPRRRRFPAAAMYML 418
            A+ +SYWC+ C+RFVRV  +D IVCP CE GF+EEI+  PRS N     RRFPA AMYML
Sbjct: 114  ASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEATPRSEN---HHRRFPATAMYML 170

Query: 419  GS-RPNSDLXXXXXXXXXXXXXXXXXSPFNPVIVLRGPTXXXXXXXXXXXXXXXXXXXXX 595
            G+ RP+S+                  SPFNPVIVLRGP                      
Sbjct: 171  GNNRPDSE-QSANLGLRRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVVERS-------- 221

Query: 596  XXXSFELYYDDGAGSGLRPLPASMSDFLMGSGFDRLLDQLAQIEINGVGRCEHPPASKAA 775
               SFELYYDDGAGSGLRPLPA+MS+FLMGSGFDRLL+QL+QIEING GR EHPPASKAA
Sbjct: 222  ---SFELYYDDGAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAA 278

Query: 776  IESMPTIEIVSSHVNTESHCAVCKEAFDLGTEAREMPCKHIYHPECILPWLSLRNSCPVC 955
            +ESMPTIEIVSSH+ TE HCAVCKEAF LG+EAREMPCKHIYH +CILPWLSLRNSCPVC
Sbjct: 279  VESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVC 338

Query: 956  RHELPTDT-HSRSSPISDGGLDEQSPARATEEDAVGLTIWRLPXXXXXXXXXXXXXXXXE 1132
            RHELPTD   +R+SP+S  G +  SPA   EE+ VGLTIWRLP                E
Sbjct: 339  RHELPTDVPGTRNSPVS--GTEALSPA-PNEEETVGLTIWRLPGGGFAVGRFSGGRRAGE 395

Query: 1133 RELPVVFTEMDGGFNNGGAPRRISWASRSSRTRE 1234
            RELPVV+TEMDGGFNN GAPRRISWASR SR+RE
Sbjct: 396  RELPVVYTEMDGGFNNSGAPRRISWASRRSRSRE 429


>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score =  400 bits (1029), Expect = e-109
 Identities = 213/334 (63%), Positives = 238/334 (71%), Gaps = 2/334 (0%)
 Frame = +2

Query: 239  ATASSYWCYSCSRFVRVETRDPIVCPDCEGGFVEEIDNPPRSANLEPRRRRFPAAAMYML 418
            A+ +SYWC+ C+RFVRV  +D IVCP CE GF+EEI+  PRS N     RRFPA AMYML
Sbjct: 4    ASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEATPRSEN---HHRRFPATAMYML 60

Query: 419  GS-RPNSDLXXXXXXXXXXXXXXXXXSPFNPVIVLRGPTXXXXXXXXXXXXXXXXXXXXX 595
            G+ RP+S+                  SPFNPVIVLRGP                      
Sbjct: 61   GNNRPDSE-QSANLGLRRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVVERS-------- 111

Query: 596  XXXSFELYYDDGAGSGLRPLPASMSDFLMGSGFDRLLDQLAQIEINGVGRCEHPPASKAA 775
               SFELYYDDGAGSGLRPLPA+MS+FLMGSGFDRLL+QL+QIEING GR EHPPASKAA
Sbjct: 112  ---SFELYYDDGAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAA 168

Query: 776  IESMPTIEIVSSHVNTESHCAVCKEAFDLGTEAREMPCKHIYHPECILPWLSLRNSCPVC 955
            +ESMPTIEIVSSH+ TE HCAVCKEAF LG+EAREMPCKHIYH +CILPWLSLRNSCPVC
Sbjct: 169  VESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVC 228

Query: 956  RHELPTDT-HSRSSPISDGGLDEQSPARATEEDAVGLTIWRLPXXXXXXXXXXXXXXXXE 1132
            RHELPTD   +R+SP+S  G +  SPA   EE+ VGLTIWRLP                E
Sbjct: 229  RHELPTDVPGTRNSPVS--GNEALSPA-PNEEETVGLTIWRLPGGGFAVGRFSGGRRAGE 285

Query: 1133 RELPVVFTEMDGGFNNGGAPRRISWASRSSRTRE 1234
            RELPVV+TEMDGGFNN GAPRRISWASR SR+RE
Sbjct: 286  RELPVVYTEMDGGFNNSGAPRRISWASRRSRSRE 319


>ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 393

 Score =  384 bits (986), Expect = e-104
 Identities = 198/340 (58%), Positives = 231/340 (67%), Gaps = 6/340 (1%)
 Frame = +2

Query: 233  MAATASSYWCYSCSRFVRVETRDPIVCPDCEGGFVEEIDNPPRSANLEPRRRR--FPAAA 406
            M++  SSYWCY CSRFVRV     +VCPDC+GGF+EEI++PPRS +L+PRR R  FPAAA
Sbjct: 3    MSSGTSSYWCYRCSRFVRVWPHHTVVCPDCDGGFIEEIEHPPRSVHLDPRRHRHRFPAAA 62

Query: 407  MYMLGSRPNSDLXXXXXXXXXXXXXXXXXSPFNPVIVLRGPTXXXXXXXXXXXXXXXXXX 586
            MYM+G RP+SD                  SPFNPVIVLRG                    
Sbjct: 63   MYMIGQRPSSD-PRPASSLRRTRRNGGDRSPFNPVIVLRGGAEDESR------------- 108

Query: 587  XXXXXXSFELYYDDGAGSGLRPLPASMSDFLMGSGFDRLLDQLAQIEINGVGRCEHPPAS 766
                   FEL+YDDG GSGLRPLP SMS+FL+GSGFDRLL+QL+QIEING+GR EHPPAS
Sbjct: 109  ------GFELFYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPAS 162

Query: 767  KAAIESMPTIEIVSSHVNTESHCAVCKEAFDLGTEAREMPCKHIYHPECILPWLSLRNSC 946
            KAAI+S+PTIEI  +H+  ESHCAVCKEAF+  T  REMPCKHIYHPECILPWL+L NSC
Sbjct: 163  KAAIDSLPTIEIDDTHLAMESHCAVCKEAFETSTAVREMPCKHIYHPECILPWLALHNSC 222

Query: 947  PVCRHELPTDTHSRSSPISDGGLDEQSPAR---ATEEDAVGLTIWRLPXXXXXXXXXXXX 1117
            PVCRHELP DT + +   +      Q+P++     EE+ VGLTIWRLP            
Sbjct: 223  PVCRHELPADTPNPNPNPNSNSNSNQNPSQNVGLNEEENVGLTIWRLPGGGFAVGRFSGG 282

Query: 1118 XXXXERELPVVFTEMDGGFNNGGA-PRRISWASRSSRTRE 1234
                +RELPVV+TEMDGGFNNGG  PRRISW SR +R RE
Sbjct: 283  RRGADRELPVVYTEMDGGFNNGGGEPRRISW-SRGNRGRE 321


>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 361

 Score =  381 bits (979), Expect = e-103
 Identities = 197/328 (60%), Positives = 228/328 (69%)
 Frame = +2

Query: 251  SYWCYSCSRFVRVETRDPIVCPDCEGGFVEEIDNPPRSANLEPRRRRFPAAAMYMLGSRP 430
            SYWCYSC+RFVRV + D IVCPDC+GGF+EEI+  PR      R  RFPAAAMYM+ +RP
Sbjct: 2    SYWCYSCNRFVRVWSHDAIVCPDCDGGFLEEIEEQPR------RPHRFPAAAMYMIENRP 55

Query: 431  NSDLXXXXXXXXXXXXXXXXXSPFNPVIVLRGPTXXXXXXXXXXXXXXXXXXXXXXXXSF 610
            NS                   SPFNPVIV+RG                          +F
Sbjct: 56   NS-AQNSHSAVRRIRRGRGDRSPFNPVIVMRGTADEGGGEGGDRG-------------AF 101

Query: 611  ELYYDDGAGSGLRPLPASMSDFLMGSGFDRLLDQLAQIEINGVGRCEHPPASKAAIESMP 790
            +LYYDDG GSGLRPLPAS+S+FL+GSGFDRLL+QL+Q+EING+GR E PPASKAAIE+MP
Sbjct: 102  DLYYDDGGGSGLRPLPASVSEFLLGSGFDRLLEQLSQMEINGIGRYEQPPASKAAIEAMP 161

Query: 791  TIEIVSSHVNTESHCAVCKEAFDLGTEAREMPCKHIYHPECILPWLSLRNSCPVCRHELP 970
            TIEI  +HVNTE HCAVCKE F+LG EAREMPCKHIYH +CILPWLSLRNSCPVCRHELP
Sbjct: 162  TIEIADAHVNTEHHCAVCKEPFELGAEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELP 221

Query: 971  TDTHSRSSPISDGGLDEQSPARATEEDAVGLTIWRLPXXXXXXXXXXXXXXXXERELPVV 1150
            ++   R+SP S    +EQ+P     E+ VGLTIWRLP                ERELPVV
Sbjct: 222  SE--ERNSPES----NEQTP-----EETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVV 270

Query: 1151 FTEMDGGFNNGGAPRRISWASRSSRTRE 1234
            +TEMDGGFNNGGAPRRISW SR++R +E
Sbjct: 271  YTEMDGGFNNGGAPRRISWTSRTNRNQE 298


>ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 380

 Score =  374 bits (960), Expect = e-101
 Identities = 193/333 (57%), Positives = 226/333 (67%), Gaps = 1/333 (0%)
 Frame = +2

Query: 239  ATASSYWCYSCSRFVRVETRDPIVCPDCEGGFVEEIDNPPRSANLEPR-RRRFPAAAMYM 415
            A ASSYWC+ CS FVRV  +D +VCPDC  GFVE+I++P R  N+E   RRRFPAAAMYM
Sbjct: 2    AAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMYM 61

Query: 416  LGSRPNSDLXXXXXXXXXXXXXXXXXSPFNPVIVLRGPTXXXXXXXXXXXXXXXXXXXXX 595
            +G+R NS                   SPFNPVIVLRGP+                     
Sbjct: 62   IGNRSNSG-QNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRR----------- 109

Query: 596  XXXSFELYYDDGAGSGLRPLPASMSDFLMGSGFDRLLDQLAQIEINGVGRCEHPPASKAA 775
                FELYYDDG GSGLRPLP SMS+FL+GSGFDRLL+QL+QIE+NG+GR E+PPASKAA
Sbjct: 110  ----FELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAA 165

Query: 776  IESMPTIEIVSSHVNTESHCAVCKEAFDLGTEAREMPCKHIYHPECILPWLSLRNSCPVC 955
            IESMPTI+I  +++ TESHCAVCKEAF+LGTEAREMPCKHIYH +CILPWLS+RNSCPVC
Sbjct: 166  IESMPTIQICENYLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVC 225

Query: 956  RHELPTDTHSRSSPISDGGLDEQSPARATEEDAVGLTIWRLPXXXXXXXXXXXXXXXXER 1135
            RHELP+D  +       G  +      +  E+ VGLTIWRLP                ER
Sbjct: 226  RHELPSDNQNSLDAAESG--ENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGER 283

Query: 1136 ELPVVFTEMDGGFNNGGAPRRISWASRSSRTRE 1234
            ELPVV+TE+DGGF NGG PRR+S+ASR  R RE
Sbjct: 284  ELPVVYTEVDGGFTNGGLPRRVSFASR-GRGRE 315