BLASTX nr result

ID: Cimicifuga21_contig00002442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002442
         (1315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269582.1| PREDICTED: uncharacterized protein LOC100242...   201   3e-49
emb|CBI26023.3| unnamed protein product [Vitis vinifera]              149   1e-33
gb|AAD49767.1|AC007932_15 ESTs gb|N97074, gb|T13943 and gb|R8996...   145   2e-32
ref|NP_175264.2| uncharacterized protein [Arabidopsis thaliana] ...   135   3e-29
ref|XP_002314335.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-28

>ref|XP_002269582.1| PREDICTED: uncharacterized protein LOC100242564 [Vitis vinifera]
            gi|147865786|emb|CAN81152.1| hypothetical protein
            VITISV_020818 [Vitis vinifera]
          Length = 362

 Score =  201 bits (511), Expect = 3e-49
 Identities = 138/370 (37%), Positives = 178/370 (48%), Gaps = 29/370 (7%)
 Frame = +2

Query: 50   MEASGVVFRPLPCLSGAGFDTQXXXXXXXXXXXXXXXX-----DLRLVGRGDSR-KVAAV 211
            ME SGVVFR +P  SGAG DTQ                     +LRL+G  DSR  V   
Sbjct: 1    MEVSGVVFRQVPFFSGAGIDTQSSKSSFSGVSVDSGNRISAFSELRLLGSRDSRVAVRPR 60

Query: 212  SSSGFSDVGHLQYYASLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLRFSSM 391
              SGF D  HL+YY   P                                  DL  FS +
Sbjct: 61   KPSGFRDESHLKYYYESPRCGAKKDKDKVTTKKKSKLLKALSK---------DLSLFSDL 111

Query: 392  GFGVEAEEGLIADIKGKKISEATEILLSQLQQXXXXXXXXXXXXXXXXXXXXX------- 550
            GFGV+++EGL  ++KGK ISEA E+LL QLQQ                            
Sbjct: 112  GFGVDSDEGLFGEVKGKMISEAAEVLLKQLQQMRAEEKELKRRRKEEKAKLKATRMETGV 171

Query: 551  VCXXXXXXXXXXXXXQCGEVIDMSSLRNVAIVEPKVEAPQP------GIEVP--IQAISI 706
            VC             +CGEV+DM+ LR+ A+VEP  +  QP      G+E P  +Q ++ 
Sbjct: 172  VCESSSSESSDS---ECGEVVDMTHLRSGAVVEPIKDESQPVIQEAKGLEEPSLLQPVTT 228

Query: 707  -IPIEDRNVGNAETSTTCCRSEGVVMVEATTEKIEVCMGGKCKKSGATALLEEFQERXXX 883
             +  E     N  TS    ++E   ++ A  ++IEVCMGGKCKKSGA ALLEEF+     
Sbjct: 229  TLKGECCTAVNTATSVAVDQNEKTQVMGAGAKRIEVCMGGKCKKSGAEALLEEFERVVGV 288

Query: 884  XXXXXXCKCMGKCRDGPNVRIAKKLD-------DGDVRPQTSPLCIGVGLEDVGVILGNF 1042
                  CKCMGKCR GPNVR+   ++       D  VR   +PLC+GVGL+DVG+I+ NF
Sbjct: 289  EGAVVGCKCMGKCRVGPNVRVLNSIEGVEAEGMDDSVRTPANPLCVGVGLQDVGIIVSNF 348

Query: 1043 FGEERKELGL 1072
            FGE  +++GL
Sbjct: 349  FGETHEDIGL 358


>emb|CBI26023.3| unnamed protein product [Vitis vinifera]
          Length = 370

 Score =  149 bits (377), Expect = 1e-33
 Identities = 111/319 (34%), Positives = 139/319 (43%), Gaps = 15/319 (4%)
 Frame = +2

Query: 50  MEASGVVFRPLPCLSGAGFDTQXXXXXXXXXXXXXXXX-----DLRLVGRGDSR-KVAAV 211
           ME SGVVFR +P  SGAG DTQ                     +LRL+G  DSR  V   
Sbjct: 1   MEVSGVVFRQVPFFSGAGIDTQSSKSSFSGVSVDSGNRISAFSELRLLGSRDSRVAVRPR 60

Query: 212 SSSGFSDVGHLQYYASLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLRFSSM 391
             SGF D  HL+YY   P                                  DL  FS +
Sbjct: 61  KPSGFRDESHLKYYYESPRCGAKKDKDKVTTKKKSKLLKALSK---------DLSLFSDL 111

Query: 392 GFGVEAEEGLIADIKGKKISEATEILLSQLQQXXXXXXXXXXXXXXXXXXXXX------- 550
           GFGV+++EGL  ++KGK ISEA E+LL QLQQ                            
Sbjct: 112 GFGVDSDEGLFGEVKGKMISEAAEVLLKQLQQMRAEEKELKRRRKEEKAKLKATRMETGV 171

Query: 551 VCXXXXXXXXXXXXXQCGEVIDMSSLRNVAIVEPKVEAPQPGIEVPIQAISIIPIEDRNV 730
           VC             +CGEV+DM+ LR+ A+VEP  +  QP I+                
Sbjct: 172 VCESSSSESSDS---ECGEVVDMTHLRSGAVVEPIKDESQPVIQ---------------- 212

Query: 731 GNAETSTTCCRSEGVV--MVEATTEKIEVCMGGKCKKSGATALLEEFQERXXXXXXXXXC 904
                      ++G+   M+ A  ++IEVCMGGKCKKSGA ALLEEF+           C
Sbjct: 213 ----------EAKGLEEPMMGAGAKRIEVCMGGKCKKSGAEALLEEFERVVGVEGAVVGC 262

Query: 905 KCMGKCRDGPNVRIAKKLD 961
           KCMGKCR GPNVR+   ++
Sbjct: 263 KCMGKCRVGPNVRVLNSIE 281


>gb|AAD49767.1|AC007932_15 ESTs gb|N97074, gb|T13943 and gb|R89965 come from this gene
            [Arabidopsis thaliana]
          Length = 360

 Score =  145 bits (366), Expect = 2e-32
 Identities = 120/368 (32%), Positives = 157/368 (42%), Gaps = 27/368 (7%)
 Frame = +2

Query: 50   MEASGVVFRPLPCLSGAGFDTQXXXXXXXXXXXXXXXXDLRLVGRGDSRKVAAVSSSGFS 229
            ME SGVV R +PC+S                       + R VG    R    V ++ F+
Sbjct: 1    MEVSGVVLRQIPCVSSGSV--------AGLRLVSEFSGNTRTVGFRTRRFRGIVCNNEFA 52

Query: 230  DVGHLQYYASLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLRFSSMGFGVEA 409
            D GH+ YY   P                                  D+  FSS+GFG++ 
Sbjct: 53   DKGHVNYYIE-PTRCGEEKEKVKVMEKEKKALKKKAKVLKSLSKNLDM--FSSIGFGLDP 109

Query: 410  EEGLIADIKGKKISEATEILLSQLQQXXXXXXXXXXXXXXXXXXXXXVCXXXXXXXXXXX 589
            E GL+ +I+ K ISEATEIL+ QL+Q                     +            
Sbjct: 110  EAGLVGEIQTKTISEATEILVKQLEQLKAEEKILKKQRKEEKAKAKAMKKMTEMDSESSS 169

Query: 590  XXQC-------GEVIDMSSLRNVAIVEPKVEAPQPGIEVP-IQAISIIPIEDRNVGNA-- 739
              +        G+V+DMSSLRN A  +P +E  QP   V  +  I    I  +N   A  
Sbjct: 170  SSESSDSDCDKGKVVDMSSLRNKA--KPVLEPLQPEATVATLPRIQEDAISCKNTSEALQ 227

Query: 740  ---ETST----------TCCRSEGVVMVEATTEKIEVCMGGKCKKSGATALLEEFQE-RX 877
               +TST          T    E V +V     ++EVCMGGKCK+SG   LL+EFQ    
Sbjct: 228  IALQTSTIFPSMANPGQTLKTVEAVSVVGLPLNRVEVCMGGKCKRSGGALLLDEFQRAMT 287

Query: 878  XXXXXXXXCKCMGKCRDGPNVRIAKKLD---DGDVRPQTSPLCIGVGLEDVGVILGNFFG 1048
                    CKCMGKCRDGPNVR+ K+ D      VR  +  LC+GVGL+DV  I+ +FF 
Sbjct: 288  GFEGSAVACKCMGKCRDGPNVRVVKETDAVMTDSVRTPSKTLCVGVGLQDVETIVTSFFD 347

Query: 1049 EERKELGL 1072
            EE    GL
Sbjct: 348  EECSREGL 355


>ref|NP_175264.2| uncharacterized protein [Arabidopsis thaliana]
            gi|12744987|gb|AAK06873.1|AF344322_1 unknown protein
            [Arabidopsis thaliana] gi|332194151|gb|AEE32272.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 285

 Score =  135 bits (339), Expect = 3e-29
 Identities = 97/258 (37%), Positives = 126/258 (48%), Gaps = 27/258 (10%)
 Frame = +2

Query: 380  FSSMGFGVEAEEGLIADIKGKKISEATEILLSQLQQXXXXXXXXXXXXXXXXXXXXXVCX 559
            FSS+GFG++ E GL+ +I+ K ISEATEIL+ QL+Q                     +  
Sbjct: 25   FSSIGFGLDPEAGLVGEIQTKTISEATEILVKQLEQLKAEEKILKKQRKEEKAKAKAMKK 84

Query: 560  XXXXXXXXXXXXQC-------GEVIDMSSLRNVAIVEPKVEAPQPGIEVP-IQAISIIPI 715
                        +        G+V+DMSSLRN A  +P +E  QP   V  +  I    I
Sbjct: 85   MTEMDSESSSSSESSDSDCDKGKVVDMSSLRNKA--KPVLEPLQPEATVATLPRIQEDAI 142

Query: 716  EDRNVGNA-----ETST----------TCCRSEGVVMVEATTEKIEVCMGGKCKKSGATA 850
              +N   A     +TST          T    E V +V     ++EVCMGGKCK+SG   
Sbjct: 143  SCKNTSEALQIALQTSTIFPSMANPGQTLKTVEAVSVVGLPLNRVEVCMGGKCKRSGGAL 202

Query: 851  LLEEFQE-RXXXXXXXXXCKCMGKCRDGPNVRIAKKLD---DGDVRPQTSPLCIGVGLED 1018
            LL+EFQ            CKCMGKCRDGPNVR+ K+ D      VR  +  LC+GVGL+D
Sbjct: 203  LLDEFQRAMTGFEGSAVACKCMGKCRDGPNVRVVKETDAVMTDSVRTPSKTLCVGVGLQD 262

Query: 1019 VGVILGNFFGEERKELGL 1072
            V  I+ +FF EE    GL
Sbjct: 263  VETIVTSFFDEECSREGL 280


>ref|XP_002314335.1| predicted protein [Populus trichocarpa] gi|222863375|gb|EEF00506.1|
            predicted protein [Populus trichocarpa]
          Length = 237

 Score =  132 bits (333), Expect = 2e-28
 Identities = 82/184 (44%), Positives = 99/184 (53%), Gaps = 31/184 (16%)
 Frame = +2

Query: 596  QCGEVIDMSSLRNVAIVEPKV-EAPQPGIEVPIQAISIIPIEDRNV-------------- 730
            +CGEVIDM  LRN A+ EP + E      E P   +  +  ++ NV              
Sbjct: 48   ECGEVIDMKRLRNEAVAEPIIGELQSVAQEEPTSILPALLTQESNVTEINGYHDHGLGIH 107

Query: 731  ----GNAETSTTC-------CRSEGVVMVEATTEK-IEVCMGGKCKKSGATALLEEFQER 874
                G A  ST+C       C      M+  T++K IEVCMG KCKKSG  ALLEEF++ 
Sbjct: 108  GEECGGAR-STSCSNAIRVSCNPTSSSMMSGTSDKRIEVCMGNKCKKSGGVALLEEFEKA 166

Query: 875  XXXXXXXXXCKCMGKCRDGPNVRIAKK----LDDGDVRPQTSPLCIGVGLEDVGVILGNF 1042
                     CKCMGKCRDGPNVRI K     +DD    P  +PLCIGVGLEDV VI+ NF
Sbjct: 167  VGIGGAVVGCKCMGKCRDGPNVRILKSGNEGVDDSVRIPAANPLCIGVGLEDVDVIVANF 226

Query: 1043 FGEE 1054
            FG+E
Sbjct: 227  FGKE 230


Top