BLASTX nr result
ID: Cimicifuga21_contig00002405
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00002405
(1415 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei... 337 3e-90
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g... 326 8e-87
ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 323 5e-86
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 323 5e-86
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g... 321 3e-85
>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
vinifera]
Length = 387
Score = 337 bits (865), Expect = 3e-90
Identities = 188/404 (46%), Positives = 251/404 (62%), Gaps = 12/404 (2%)
Frame = +3
Query: 48 MAEWSQLSEDLLHRIATQFTSHIDLLRFRSVCSTWRSSITYPPHSFPNRIPIRCCNPPDD 227
MAEW+ L DLLH IA + SH DLLRFRSVCS+WRSS P S + +PI +
Sbjct: 1 MAEWANLPRDLLHLIAKRLDSHFDLLRFRSVCSSWRSSTPSKPRSIFSHLPILPTTGFSE 60
Query: 228 ST-SFHLSKRVILRLSLPQHH-----HRWIIKLEQDVVEMSHLLNPLSESKIQPLPTNFP 389
T +F+LSKR IL+L LP + W+IK+E+D + L+NPL+ K + LP +FP
Sbjct: 61 ITWAFYLSKRSILQLGLPDSRAQTTPNSWLIKIEEDPSGVIRLINPLTTFKFRHLPPDFP 120
Query: 390 KVFNLMDVQISELGQEFVLRYAERSPLG--YAGDVYKEKVVFSLIPDLWSSESEYVIMTI 563
K F+ +++ ELGQE+VL Y + P G Y G +Y EKV F + ++ ++TI
Sbjct: 121 KTFDFSGLRVFELGQEYVLEYMDYRPPGNAYLGSLYMEKVAFCS-----GNGDDFWLLTI 175
Query: 564 HVSGKLDLFRLKDNMWYVIEDMPNPYDDVIHYKGKFYAVDTTGRAVVV----GPSLAVTE 731
H+SGKL +FR D W +I+DM +PYDDVI + GKFYAVD TGR VVV G S V
Sbjct: 176 HLSGKLAMFRSGDKKWMIIDDMQSPYDDVIFFDGKFYAVDNTGRTVVVDVADGSSPVVNL 235
Query: 732 VASSVFSGDKKYLVELDGELMLVDRYLRFGSDDQPIYYQGIQDYEVFVPNDDTYPVDTTV 911
ASSVF GDKK LVE +GEL+LVD Y DD D V + ++ +
Sbjct: 236 AASSVFGGDKKVLVESEGELLLVDTYFTMYHDD---------DEHV------RWMIERMI 280
Query: 912 EFKVFKLDRWEKNWVEVKSLGGQMLFLGDNCSFSAPASDFNGCKENCIYFTDRYLQSNRE 1091
FKVF+LD+ E+ WVE++SLG ++LFLGD+ SFSA ASDF GCK N I FT+ S+ E
Sbjct: 281 HFKVFRLDQREQKWVEIESLGDRLLFLGDDSSFSARASDFYGCKGNSICFTNISFFSDAE 340
Query: 1092 DDGSFKGHSIGVYNLEDGIIAPLASYSGSYQLFWPPPMWVTSAS 1223
+D + + +IGV++L+ G I PL+SY+ + WPPP WV+S S
Sbjct: 341 EDDASRSGTIGVFDLDSGSIGPLSSYANYSKTIWPPPAWVSSTS 384
>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
gi|222848503|gb|EEE86050.1| f-box family protein [Populus
trichocarpa]
Length = 469
Score = 326 bits (836), Expect = 8e-87
Identities = 187/414 (45%), Positives = 251/414 (60%), Gaps = 17/414 (4%)
Frame = +3
Query: 48 MAEWSQLSEDLLHRIATQFTSHIDLLRFRSVCSTWRSSIT-YPPHSFPNRIPIRCCNPPD 224
MAEW+ L +DL+ I+ + + DLLRFRSVC++WRSSI PP N I P+
Sbjct: 1 MAEWTHLPKDLMELISKRLDTSTDLLRFRSVCNSWRSSIPPEPPCLSSNTFKIL----PN 56
Query: 225 DSTS-----FHLSKRVILRLSLPQHHHR-----WIIKLEQDVVEMSHLLNPLSESKIQPL 374
D S F L KR + + LP H++ W+IK+E+DV HL +PLS + L
Sbjct: 57 DGISHTSFGFSLFKRTVFLVGLPNSHNQTDTQGWLIKIEEDVPGKKHLFDPLSRCRSTSL 116
Query: 375 PTNFPKVFNLMDVQISELGQEFVLRYAERSPLGY----AGDVYKEKVVFSLIPDLW-SSE 539
P N P+V +LM+++I ELG E+VL + P AG++Y EKVV +W +S
Sbjct: 117 PNNLPRVLDLMNLRIRELGHEYVLHHLNYKPNSSSFTDAGNLYMEKVVM-----IWLNSL 171
Query: 540 SEYVIMTIHVSGKLDLFRLKDNMWYVIEDMPNPYDDVIHYKGKFYAVDTTGRAVVVGPSL 719
+E+V++TIHVSGKL +F+ D W +I +MP+P+DDVI YKG+FYAVD TGR VVV
Sbjct: 172 TEFVLLTIHVSGKLAIFKSGDKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRTVVVAMDT 231
Query: 720 AVTEVASSVFSGDKKYLVELDGELMLVDRYLRFGSDDQPIYYQGIQDYEVFVPNDDTYPV 899
+ V + VF GDKKYLVE G+L+LVD YL SD +G+ V + Y
Sbjct: 232 NLGLVGNPVFGGDKKYLVESKGDLLLVDMYLSIDSD------EGLSIGHDVVQDLVQYMS 285
Query: 900 DTTVEFKVFKLDRWEKNWVEVKSLGGQMLFLGDNCSFSAPASDFNGCKENCIYFTDRYLQ 1079
+ TV FKVFKL+ K W+EV L ++LFLGD+ +FSA AS+ +GCK NCI+F D +
Sbjct: 286 ERTVWFKVFKLNEEGKCWIEVNDLEDRVLFLGDDLTFSASASELSGCKGNCIFFNDDFFY 345
Query: 1080 SNRE-DDGSFKGHSIGVYNLEDGIIAPLASYSGSYQLFWPPPMWVTSASS*VML 1238
S E DDGS G IGV+ LE G I PL ++ + ++FWPPP WV S S V L
Sbjct: 346 SRGEGDDGSLFGRDIGVFELESGCIGPLRNFPDNSKMFWPPPDWVASTSLEVSL 399
>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
Length = 458
Score = 323 bits (829), Expect = 5e-86
Identities = 182/405 (44%), Positives = 244/405 (60%), Gaps = 13/405 (3%)
Frame = +3
Query: 48 MAEWSQLSEDLLHRIATQFTSHIDLLRFRSVCSTWRSSITYPPHSFPNRIPIRCCNPPDD 227
MAEWS L +DLL+ I+ + + D +RFRSVCS+WRS ++ H+ P R P + D
Sbjct: 1 MAEWSHLPKDLLYLISQRLQNPFDTMRFRSVCSSWRSVVSPKRHTLPVRFPFLPNHGISD 60
Query: 228 ST-SFHLSKRVILRLSLPQHHHR-WIIKLEQDVVEMSHLLNPLSESKIQPLPTNFPKVFN 401
T F+L+KR I R+ P H W+IK+E+D M + NPLS+S +PLP NFPKV N
Sbjct: 61 PTWGFNLTKRSIFRVGSPMDHSDGWLIKVEEDACGMIKISNPLSKSYFKPLPKNFPKVLN 120
Query: 402 LMDVQISELGQEFVLRYAERSPL----GYAGDVYKEKVVFSLIPDLWSSESEYVIMTIHV 569
L++ + EL QE+VL Y P+ G AGD+Y+EK+ + + S++V++TIHV
Sbjct: 121 LLNFPVLELCQEYVLHYLNFWPVRHRPGDAGDLYREKIAYKCLN---YDGSQFVLVTIHV 177
Query: 570 SGKLDLFRLKDNMWYVIEDMPNPYDDVIHYKGKFYAVDTTGRAVVVGPSLAVTEVASSVF 749
SGKL +F+ +D W I PYDDVI + G+FYAVD +G +V VT +A VF
Sbjct: 178 SGKLAMFKSEDGQWSTIHHTALPYDDVILFNGEFYAVDNSGATFLVESQHKVTLIAEPVF 237
Query: 750 SGDKKYLVELDGELMLVDRYLR------FGSDDQPIYYQGIQDYEVFVPNDDTYPVDTTV 911
GDKK L+E +GEL+LVD YL FG D +P +G+ + TV
Sbjct: 238 GGDKKILMECNGELLLVDMYLTVDSEEGFGLDGEPT--EGVLH-------------EKTV 282
Query: 912 EFKVFKLDR-WEKNWVEVKSLGGQMLFLGDNCSFSAPASDFNGCKENCIYFTDRYLQSNR 1088
FKVFKL R K W V LG MLFLG+NCSFSA AS +GCK NCI+FTD +L N
Sbjct: 283 GFKVFKLHRNGSKKWTVVCDLGNTMLFLGENCSFSASASGVSGCKGNCIFFTDGFLCPNV 342
Query: 1089 EDDGSFKGHSIGVYNLEDGIIAPLASYSGSYQLFWPPPMWVTSAS 1223
++D FKG I +++LE G I+PL+ +LFWPPP W+TS S
Sbjct: 343 DEDDVFKGSDIAIFDLEFGTISPLSDSPMYSRLFWPPPSWITSTS 387
>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
Length = 404
Score = 323 bits (829), Expect = 5e-86
Identities = 182/405 (44%), Positives = 244/405 (60%), Gaps = 13/405 (3%)
Frame = +3
Query: 48 MAEWSQLSEDLLHRIATQFTSHIDLLRFRSVCSTWRSSITYPPHSFPNRIPIRCCNPPDD 227
MAEWS L +DLL+ I+ + + D +RFRSVCS+WRS ++ H+ P R P + D
Sbjct: 1 MAEWSHLPKDLLYLISQRLQNPFDTMRFRSVCSSWRSVVSPKRHTLPVRFPFLPNHGISD 60
Query: 228 ST-SFHLSKRVILRLSLPQHHHR-WIIKLEQDVVEMSHLLNPLSESKIQPLPTNFPKVFN 401
T F+L+KR I R+ P H W+IK+E+D M + NPLS+S +PLP NFPKV N
Sbjct: 61 PTWGFNLTKRSIFRVGSPMDHSDGWLIKVEEDACGMIKISNPLSKSYFKPLPKNFPKVLN 120
Query: 402 LMDVQISELGQEFVLRYAERSPL----GYAGDVYKEKVVFSLIPDLWSSESEYVIMTIHV 569
L++ + EL QE+VL Y P+ G AGD+Y+EK+ + + S++V++TIHV
Sbjct: 121 LLNFPVLELCQEYVLHYLNFWPVRHRPGDAGDLYREKIAYKCLN---YDGSQFVLVTIHV 177
Query: 570 SGKLDLFRLKDNMWYVIEDMPNPYDDVIHYKGKFYAVDTTGRAVVVGPSLAVTEVASSVF 749
SGKL +F+ +D W I PYDDVI + G+FYAVD +G +V VT +A VF
Sbjct: 178 SGKLAMFKSEDGQWSTIHHTALPYDDVILFNGEFYAVDNSGATFLVESQHKVTLIAEPVF 237
Query: 750 SGDKKYLVELDGELMLVDRYLR------FGSDDQPIYYQGIQDYEVFVPNDDTYPVDTTV 911
GDKK L+E +GEL+LVD YL FG D +P +G+ + TV
Sbjct: 238 GGDKKILMECNGELLLVDMYLTVDSEEGFGLDGEPT--EGVLH-------------EKTV 282
Query: 912 EFKVFKLDR-WEKNWVEVKSLGGQMLFLGDNCSFSAPASDFNGCKENCIYFTDRYLQSNR 1088
FKVFKL R K W V LG MLFLG+NCSFSA AS +GCK NCI+FTD +L N
Sbjct: 283 GFKVFKLHRNGSKKWTVVCDLGNTMLFLGENCSFSASASGVSGCKGNCIFFTDGFLCPNV 342
Query: 1089 EDDGSFKGHSIGVYNLEDGIIAPLASYSGSYQLFWPPPMWVTSAS 1223
++D FKG I +++LE G I+PL+ +LFWPPP W+TS S
Sbjct: 343 DEDDVFKGSDIAIFDLEFGTISPLSDSPMYSRLFWPPPSWITSTS 387
>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
gi|222850098|gb|EEE87645.1| f-box family protein [Populus
trichocarpa]
Length = 410
Score = 321 bits (822), Expect = 3e-85
Identities = 182/408 (44%), Positives = 248/408 (60%), Gaps = 16/408 (3%)
Frame = +3
Query: 48 MAEWSQLSEDLLHRIATQFTSHIDLLRFRSVCSTWRSSITYPPHSFPNRIPIRCCNPPDD 227
MAEW+ L +DL+ I+ + DLLRFRSVC++WRSSI PP S P P+D
Sbjct: 1 MAEWTHLPKDLIELISKCLDTSTDLLRFRSVCNSWRSSI--PPKS-PRLSSNTFKILPND 57
Query: 228 STS-----FHLSKRVILRLSLPQHHHR-----WIIKLEQDVVEMSHLLNPLSESKIQPLP 377
S F L KR I + LP H++ W++K+E+DV HL +PLS + L
Sbjct: 58 GISHTSFGFSLFKRSIFLIGLPNSHNQTDLQGWLVKIEEDVPGKKHLFDPLSRCRSTSLH 117
Query: 378 TNFPKVFNLMDVQISELGQEFVLRYAERSPLGY----AGDVYKEKVVFSLIPDLW-SSES 542
+ P+V +LM+++I ELG E+VL + P AG++Y EKVV +W + E+
Sbjct: 118 HSLPRVLDLMNLRIRELGHEYVLHHVSYKPNSSSFTDAGNLYMEKVVM-----IWLNCET 172
Query: 543 EYVIMTIHVSGKLDLFRLKDNMWYVIEDMPNPYDDVIHYKGKFYAVDTTGRAVVVGPSLA 722
E+V++TIHVSGKL +F+ D W +I +MP+P+DDVI YKG+FYAVD TGR VVV
Sbjct: 173 EFVLLTIHVSGKLAMFKSGDKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRTVVVALDTD 232
Query: 723 VTEVASSVFSGDKKYLVELDGELMLVDRYLRFGSDDQPIYYQGIQDYEVFVPNDDTYPVD 902
+ V VF GDKKYLVE G+L+LVD YL +D +G+ V + Y +
Sbjct: 233 LGLVGDPVFGGDKKYLVESKGDLLLVDMYLSIDTD------EGLSIGNDVVQDLVQYMSE 286
Query: 903 TTVEFKVFKLDRWEKNWVEVKSLGGQMLFLGDNCSFSAPASDFNGCKENCIYFTDRYLQS 1082
TV FKVFKL+ K+W+EVK+L ++LFLGD+ +FSA AS+ +GCK NCI+F D + S
Sbjct: 287 RTVRFKVFKLNEEGKSWIEVKNLEDRVLFLGDDSTFSASASELSGCKGNCIFFEDNFFYS 346
Query: 1083 NRE-DDGSFKGHSIGVYNLEDGIIAPLASYSGSYQLFWPPPMWVTSAS 1223
E DDGS G IGV+ LE G I PL ++ ++FWPPP W+ S S
Sbjct: 347 REEGDDGSMIGRDIGVFELESGCIGPLRNFPDYSKMFWPPPDWIASTS 394