BLASTX nr result

ID: Cimicifuga21_contig00002390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002390
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27727.3| unnamed protein product [Vitis vinifera]              130   5e-28
ref|XP_002267013.1| PREDICTED: uncharacterized protein LOC100244...   130   5e-28
ref|XP_003580711.1| PREDICTED: UPF0136 membrane protein At2g2624...   126   7e-27
gb|AFK38721.1| unknown [Lotus japonicus]                              125   1e-26
ref|NP_001136902.1| uncharacterized protein LOC100217059 [Zea ma...   125   2e-26

>emb|CBI27727.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score =  130 bits (327), Expect = 5e-28
 Identities = 70/107 (65%), Positives = 75/107 (70%)
 Frame = -3

Query: 566 MSMSQKLTLGYAALVGVGGIMGYVKSGSQKXXXXXXXXXXXXXYVYTQLPVRPXXXXXXX 387
           MSMSQKLTLGYAALVGVGG+MGY+KSGSQK             YVYTQLP RP       
Sbjct: 1   MSMSQKLTLGYAALVGVGGVMGYMKSGSQKSLAAGGLSALLLYYVYTQLPTRPAFASFLG 60

Query: 386 XXXXXXXXGVMGSRFKRSGKIFPAGLVSFVSFVMTGGYLHGILRGLH 246
                   GVMGSRFK+SGK+FPAG+VS VS VMTGGYLHGILR LH
Sbjct: 61  LGLSAALVGVMGSRFKKSGKLFPAGVVSLVSLVMTGGYLHGILRSLH 107


>ref|XP_002267013.1| PREDICTED: uncharacterized protein LOC100244242 [Vitis vinifera]
          Length = 246

 Score =  130 bits (327), Expect = 5e-28
 Identities = 70/107 (65%), Positives = 75/107 (70%)
 Frame = -3

Query: 566 MSMSQKLTLGYAALVGVGGIMGYVKSGSQKXXXXXXXXXXXXXYVYTQLPVRPXXXXXXX 387
           MSMSQKLTLGYAALVGVGG+MGY+KSGSQK             YVYTQLP RP       
Sbjct: 140 MSMSQKLTLGYAALVGVGGVMGYMKSGSQKSLAAGGLSALLLYYVYTQLPTRPAFASFLG 199

Query: 386 XXXXXXXXGVMGSRFKRSGKIFPAGLVSFVSFVMTGGYLHGILRGLH 246
                   GVMGSRFK+SGK+FPAG+VS VS VMTGGYLHGILR LH
Sbjct: 200 LGLSAALVGVMGSRFKKSGKLFPAGVVSLVSLVMTGGYLHGILRSLH 246


>ref|XP_003580711.1| PREDICTED: UPF0136 membrane protein At2g26240-like [Brachypodium
           distachyon]
          Length = 209

 Score =  126 bits (317), Expect = 7e-27
 Identities = 66/112 (58%), Positives = 74/112 (66%)
 Frame = -3

Query: 578 MATGMSMSQKLTLGYAALVGVGGIMGYVKSGSQKXXXXXXXXXXXXXYVYTQLPVRPXXX 399
           M  G+SMSQKLTL YAALVG GG+MGY+KSGSQK             +V+TQLPVRP   
Sbjct: 98  MGEGLSMSQKLTLAYAALVGAGGVMGYMKSGSQKSLAAGGISALVLYFVHTQLPVRPVFA 157

Query: 398 XXXXXXXXXXXXGVMGSRFKRSGKIFPAGLVSFVSFVMTGGYLHGILRGLHA 243
                        VMGSRFK+SGKIFPAG+VS +SFVM GGY HGILR  HA
Sbjct: 158 SSIGLGISAALLTVMGSRFKKSGKIFPAGVVSLLSFVMVGGYFHGILRSSHA 209


>gb|AFK38721.1| unknown [Lotus japonicus]
          Length = 226

 Score =  125 bits (315), Expect = 1e-26
 Identities = 64/108 (59%), Positives = 75/108 (69%)
 Frame = -3

Query: 569 GMSMSQKLTLGYAALVGVGGIMGYVKSGSQKXXXXXXXXXXXXXYVYTQLPVRPXXXXXX 390
           G+SMSQKLTLGYAALVGVGG+MGY+KSGSQK             YV+T+LP+RP      
Sbjct: 119 GLSMSQKLTLGYAALVGVGGLMGYLKSGSQKSLLAGGLSALLLYYVHTELPLRPVFASSL 178

Query: 389 XXXXXXXXXGVMGSRFKRSGKIFPAGLVSFVSFVMTGGYLHGILRGLH 246
                     VMGSRFK+SGK+FPAG+VS VS +MTGGYLHGI+R  H
Sbjct: 179 GLGISAALLAVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSAH 226


>ref|NP_001136902.1| uncharacterized protein LOC100217059 [Zea mays]
           gi|194697540|gb|ACF82854.1| unknown [Zea mays]
           gi|414585069|tpg|DAA35640.1| TPA: hypothetical protein
           ZEAMMB73_462932 [Zea mays]
          Length = 202

 Score =  125 bits (313), Expect = 2e-26
 Identities = 65/112 (58%), Positives = 72/112 (64%)
 Frame = -3

Query: 578 MATGMSMSQKLTLGYAALVGVGGIMGYVKSGSQKXXXXXXXXXXXXXYVYTQLPVRPXXX 399
           M  G+SMSQKLTL YAALVG GG+MGY+KSGSQK              V+TQLPVRP   
Sbjct: 91  MGQGLSMSQKLTLAYAALVGAGGVMGYMKSGSQKSLAAGGISALVLYVVHTQLPVRPVLA 150

Query: 398 XXXXXXXXXXXXGVMGSRFKRSGKIFPAGLVSFVSFVMTGGYLHGILRGLHA 243
                        VMGSRFK+SGK+FPAG+VS VS VM GGY HGILR  HA
Sbjct: 151 SSIGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLVMVGGYFHGILRSSHA 202


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