BLASTX nr result

ID: Cimicifuga21_contig00002385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002385
         (1934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279124.2| PREDICTED: tryptophan synthase beta chain 2 ...   845   0.0  
emb|CBI16881.3| unnamed protein product [Vitis vinifera]              845   0.0  
ref|XP_002329254.1| predicted protein [Populus trichocarpa] gi|2...   832   0.0  
ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-...   812   0.0  
ref|XP_004141605.1| PREDICTED: tryptophan synthase beta chain 2-...   811   0.0  

>ref|XP_002279124.2| PREDICTED: tryptophan synthase beta chain 2 [Vitis vinifera]
          Length = 483

 Score =  845 bits (2182), Expect = 0.0
 Identities = 401/471 (85%), Positives = 441/471 (93%), Gaps = 1/471 (0%)
 Frame = +1

Query: 202  KGKMAHLKHSSGYRVRAKLKSS-TDPKAIEIPRQWYNLVADLPIKPPPFLHPKTHEPVKP 378
            +GK   L+ S   RVRA+  SS   P+A+EIP QWYNL+ADLP+KPPP LHP+T EP+KP
Sbjct: 13   QGKPMLLRASPRCRVRARAASSKAGPQAVEIPHQWYNLIADLPVKPPPALHPQTQEPIKP 72

Query: 379  EDLSPLFSDELILQEASTERFIDIPDEVVDIYKLWRPTPLIRAKRLEKLLDTPARIYYKY 558
            EDLSPLF DELI QEAST+RFI IP+EV+D+Y+LWRPTPLIRAKRLEKLLDTPARIYYKY
Sbjct: 73   EDLSPLFPDELIKQEASTDRFIAIPEEVIDVYRLWRPTPLIRAKRLEKLLDTPARIYYKY 132

Query: 559  EGGSPAGSHKPNTAVPQVWYNAQQGVKSIVTETGAGQWGSSLAFACSLFGLNCEVWQVRE 738
            EG SPAGSHKPNTAVPQVWYNAQ+GVKS+ TETGAGQWGSSLAFACSLFGL+CEVWQVR 
Sbjct: 133  EGVSPAGSHKPNTAVPQVWYNAQEGVKSVTTETGAGQWGSSLAFACSLFGLDCEVWQVRA 192

Query: 739  SYDQKPYRKLMMQTWGAKVHPSPSSITDAGRKILQMDPSSPGSLGIAISEAVEMAAKNAD 918
            SYDQKPYR LMMQTWGAKVHPSPSSIT+AGRKILQM+PSSPGSLGIAISEAVE+AA NAD
Sbjct: 193  SYDQKPYRNLMMQTWGAKVHPSPSSITEAGRKILQMNPSSPGSLGIAISEAVEVAAANAD 252

Query: 919  TKYCLGSVLNHVLLHQTIIGEECIKQMEAIGETPDLIIGCTGGGSNFGGLAFPFIREKLA 1098
            TKYCLGSVLNHVLLHQT+IGEECIKQMEAIGETPD+IIGCTGGGSNFGGL FPFIREKL 
Sbjct: 253  TKYCLGSVLNHVLLHQTVIGEECIKQMEAIGETPDVIIGCTGGGSNFGGLTFPFIREKLK 312

Query: 1099 GKINPLIRAVEPTACPSLTKGRYTYDYGDTAGLTPLMKMHTLGHDFIPDPIHSGGLRYHG 1278
            G+INPLIRAVEPTACPSLTKG Y YDYGDTAG+TPLMKMHTLGHDF+PDPIH+GGLRYHG
Sbjct: 313  GRINPLIRAVEPTACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHDFVPDPIHAGGLRYHG 372

Query: 1279 MAPLISHIYELGFMEALAIPQIECFRGAIQFARTEGLIAAPEPTHAIAATIREALHCKET 1458
            MAPL+SH+YELGFMEA++IPQIECF+GAIQFARTEGLI APEPTHAIAATIREALHC+ET
Sbjct: 373  MAPLLSHVYELGFMEAISIPQIECFQGAIQFARTEGLIPAPEPTHAIAATIREALHCRET 432

Query: 1459 GEAKVILMAMCGHGHFDLPAYEKYLQGNMVDLSFSDEKMQASLADVPKVVS 1611
            GE+KVIL AMCGHGHFDLPAYEKYLQGNMVDLSF +EK++ASLA++P+VV+
Sbjct: 433  GESKVILTAMCGHGHFDLPAYEKYLQGNMVDLSFEEEKIKASLANIPQVVA 483


>emb|CBI16881.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  845 bits (2182), Expect = 0.0
 Identities = 401/471 (85%), Positives = 441/471 (93%), Gaps = 1/471 (0%)
 Frame = +1

Query: 202  KGKMAHLKHSSGYRVRAKLKSS-TDPKAIEIPRQWYNLVADLPIKPPPFLHPKTHEPVKP 378
            +GK   L+ S   RVRA+  SS   P+A+EIP QWYNL+ADLP+KPPP LHP+T EP+KP
Sbjct: 25   QGKPMLLRASPRCRVRARAASSKAGPQAVEIPHQWYNLIADLPVKPPPALHPQTQEPIKP 84

Query: 379  EDLSPLFSDELILQEASTERFIDIPDEVVDIYKLWRPTPLIRAKRLEKLLDTPARIYYKY 558
            EDLSPLF DELI QEAST+RFI IP+EV+D+Y+LWRPTPLIRAKRLEKLLDTPARIYYKY
Sbjct: 85   EDLSPLFPDELIKQEASTDRFIAIPEEVIDVYRLWRPTPLIRAKRLEKLLDTPARIYYKY 144

Query: 559  EGGSPAGSHKPNTAVPQVWYNAQQGVKSIVTETGAGQWGSSLAFACSLFGLNCEVWQVRE 738
            EG SPAGSHKPNTAVPQVWYNAQ+GVKS+ TETGAGQWGSSLAFACSLFGL+CEVWQVR 
Sbjct: 145  EGVSPAGSHKPNTAVPQVWYNAQEGVKSVTTETGAGQWGSSLAFACSLFGLDCEVWQVRA 204

Query: 739  SYDQKPYRKLMMQTWGAKVHPSPSSITDAGRKILQMDPSSPGSLGIAISEAVEMAAKNAD 918
            SYDQKPYR LMMQTWGAKVHPSPSSIT+AGRKILQM+PSSPGSLGIAISEAVE+AA NAD
Sbjct: 205  SYDQKPYRNLMMQTWGAKVHPSPSSITEAGRKILQMNPSSPGSLGIAISEAVEVAAANAD 264

Query: 919  TKYCLGSVLNHVLLHQTIIGEECIKQMEAIGETPDLIIGCTGGGSNFGGLAFPFIREKLA 1098
            TKYCLGSVLNHVLLHQT+IGEECIKQMEAIGETPD+IIGCTGGGSNFGGL FPFIREKL 
Sbjct: 265  TKYCLGSVLNHVLLHQTVIGEECIKQMEAIGETPDVIIGCTGGGSNFGGLTFPFIREKLK 324

Query: 1099 GKINPLIRAVEPTACPSLTKGRYTYDYGDTAGLTPLMKMHTLGHDFIPDPIHSGGLRYHG 1278
            G+INPLIRAVEPTACPSLTKG Y YDYGDTAG+TPLMKMHTLGHDF+PDPIH+GGLRYHG
Sbjct: 325  GRINPLIRAVEPTACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHDFVPDPIHAGGLRYHG 384

Query: 1279 MAPLISHIYELGFMEALAIPQIECFRGAIQFARTEGLIAAPEPTHAIAATIREALHCKET 1458
            MAPL+SH+YELGFMEA++IPQIECF+GAIQFARTEGLI APEPTHAIAATIREALHC+ET
Sbjct: 385  MAPLLSHVYELGFMEAISIPQIECFQGAIQFARTEGLIPAPEPTHAIAATIREALHCRET 444

Query: 1459 GEAKVILMAMCGHGHFDLPAYEKYLQGNMVDLSFSDEKMQASLADVPKVVS 1611
            GE+KVIL AMCGHGHFDLPAYEKYLQGNMVDLSF +EK++ASLA++P+VV+
Sbjct: 445  GESKVILTAMCGHGHFDLPAYEKYLQGNMVDLSFEEEKIKASLANIPQVVA 495


>ref|XP_002329254.1| predicted protein [Populus trichocarpa] gi|222870708|gb|EEF07839.1|
            predicted protein [Populus trichocarpa]
          Length = 461

 Score =  832 bits (2148), Expect = 0.0
 Identities = 396/459 (86%), Positives = 431/459 (93%)
 Frame = +1

Query: 229  SSGYRVRAKLKSSTDPKAIEIPRQWYNLVADLPIKPPPFLHPKTHEPVKPEDLSPLFSDE 408
            S+G RVRA+   + D KA+ IP QWYN+VADL +KPPP LHPKT EPVKPEDLSPLF DE
Sbjct: 3    SNGGRVRARASLNADLKAVGIPHQWYNVVADLSVKPPPPLHPKTFEPVKPEDLSPLFPDE 62

Query: 409  LILQEASTERFIDIPDEVVDIYKLWRPTPLIRAKRLEKLLDTPARIYYKYEGGSPAGSHK 588
            LI QEAST++FIDIP+EV+DIY LWRPTPLIRAKRLEKLLDTPARIYYKYEGGSPAGSHK
Sbjct: 63   LIRQEASTDKFIDIPEEVLDIYSLWRPTPLIRAKRLEKLLDTPARIYYKYEGGSPAGSHK 122

Query: 589  PNTAVPQVWYNAQQGVKSIVTETGAGQWGSSLAFACSLFGLNCEVWQVRESYDQKPYRKL 768
            PNTAVPQV+YNAQQG+K++VTETGAGQWG SLAFACSLFGL+CEVWQVR SYDQKPYR+L
Sbjct: 123  PNTAVPQVFYNAQQGIKNVVTETGAGQWGCSLAFACSLFGLDCEVWQVRASYDQKPYRRL 182

Query: 769  MMQTWGAKVHPSPSSITDAGRKILQMDPSSPGSLGIAISEAVEMAAKNADTKYCLGSVLN 948
            MM+TWGAKVHPSPSSIT+ GR+ILQMDPSSPGSLGIAISEAVE+AAKNADTKYCLGSVLN
Sbjct: 183  MMETWGAKVHPSPSSITETGRRILQMDPSSPGSLGIAISEAVEVAAKNADTKYCLGSVLN 242

Query: 949  HVLLHQTIIGEECIKQMEAIGETPDLIIGCTGGGSNFGGLAFPFIREKLAGKINPLIRAV 1128
            HVLLHQT+IGEECIKQMEAIGETPD+IIGCTGGGSNF GL+FPFIREKL GKINP+I+AV
Sbjct: 243  HVLLHQTVIGEECIKQMEAIGETPDVIIGCTGGGSNFAGLSFPFIREKLNGKINPVIKAV 302

Query: 1129 EPTACPSLTKGRYTYDYGDTAGLTPLMKMHTLGHDFIPDPIHSGGLRYHGMAPLISHIYE 1308
            EP ACPSLTKG Y YDYGDTAG+TPLMKMHTLGHDFIPDPIH+GGLRYHGMAPLISH+YE
Sbjct: 303  EPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYE 362

Query: 1309 LGFMEALAIPQIECFRGAIQFARTEGLIAAPEPTHAIAATIREALHCKETGEAKVILMAM 1488
            LGFMEA+AIPQIECFRGAIQFAR+EGLI APEPTHAIAATIREALHCKETGEAKVILMAM
Sbjct: 363  LGFMEAMAIPQIECFRGAIQFARSEGLIPAPEPTHAIAATIREALHCKETGEAKVILMAM 422

Query: 1489 CGHGHFDLPAYEKYLQGNMVDLSFSDEKMQASLADVPKV 1605
            CGHGHFDL +YEKYLQG MVDLSF +EK++ASL  VP+V
Sbjct: 423  CGHGHFDLKSYEKYLQGKMVDLSFDEEKIRASLDKVPQV 461


>ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score =  812 bits (2098), Expect = 0.0
 Identities = 383/470 (81%), Positives = 431/470 (91%)
 Frame = +1

Query: 196  SSKGKMAHLKHSSGYRVRAKLKSSTDPKAIEIPRQWYNLVADLPIKPPPFLHPKTHEPVK 375
            S K   AHL+ S+GYR +A   S+ + KA+E+PRQWYNLVADLP+KPPP LHPKT+EP+K
Sbjct: 14   SLKRVPAHLRFSNGYRTKAA--SNPNLKAVEVPRQWYNLVADLPVKPPPPLHPKTYEPIK 71

Query: 376  PEDLSPLFSDELILQEASTERFIDIPDEVVDIYKLWRPTPLIRAKRLEKLLDTPARIYYK 555
            PEDLS LF DELI QEASTER+I+IPDEVVDIY LWRPTPLIRAKRLEKLLDTPARIYYK
Sbjct: 72   PEDLSHLFPDELIKQEASTERYINIPDEVVDIYGLWRPTPLIRAKRLEKLLDTPARIYYK 131

Query: 556  YEGGSPAGSHKPNTAVPQVWYNAQQGVKSIVTETGAGQWGSSLAFACSLFGLNCEVWQVR 735
            YEG SPAGSHKPN+AVPQVWYNAQ+GVK++VTETGAGQWG SLAFACS+FG+ CEVWQVR
Sbjct: 132  YEGVSPAGSHKPNSAVPQVWYNAQEGVKNVVTETGAGQWGCSLAFACSIFGIGCEVWQVR 191

Query: 736  ESYDQKPYRKLMMQTWGAKVHPSPSSITDAGRKILQMDPSSPGSLGIAISEAVEMAAKNA 915
             SYDQKPYR++MM+TWGAKVHPSPS ITDAGRK LQ+DPSSPGSLGIAISEAVE+AA NA
Sbjct: 192  ASYDQKPYRRMMMETWGAKVHPSPSDITDAGRKFLQVDPSSPGSLGIAISEAVEVAALNA 251

Query: 916  DTKYCLGSVLNHVLLHQTIIGEECIKQMEAIGETPDLIIGCTGGGSNFGGLAFPFIREKL 1095
            DTKYCLGSVLNHVLLHQT+IGEEC+KQ+EA+GETPDLIIGCTGGGSNF GL+FPF+REKL
Sbjct: 252  DTKYCLGSVLNHVLLHQTVIGEECLKQLEALGETPDLIIGCTGGGSNFAGLSFPFLREKL 311

Query: 1096 AGKINPLIRAVEPTACPSLTKGRYTYDYGDTAGLTPLMKMHTLGHDFIPDPIHSGGLRYH 1275
            AG INP+IRAVEP ACPSLTKG Y YDYGDTAG+TPLMKMHTLGH+FIPDPIH+GGLRYH
Sbjct: 312  AGNINPVIRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHNFIPDPIHAGGLRYH 371

Query: 1276 GMAPLISHIYELGFMEALAIPQIECFRGAIQFARTEGLIAAPEPTHAIAATIREALHCKE 1455
            GMAPLISH+Y LG +EA+++PQ ECF+GAIQFAR+EGLI APEPTHAIAATIREAL C+E
Sbjct: 372  GMAPLISHVYNLGLLEAISLPQTECFQGAIQFARSEGLIPAPEPTHAIAATIREALRCRE 431

Query: 1456 TGEAKVILMAMCGHGHFDLPAYEKYLQGNMVDLSFSDEKMQASLADVPKV 1605
            TGE+KVIL AMCGHGHFDLPAYEKYLQG + DLSF++EK+Q SL  +P+V
Sbjct: 432  TGESKVILTAMCGHGHFDLPAYEKYLQGGISDLSFANEKIQESLTTIPQV 481


>ref|XP_004141605.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score =  811 bits (2095), Expect = 0.0
 Identities = 382/470 (81%), Positives = 431/470 (91%)
 Frame = +1

Query: 196  SSKGKMAHLKHSSGYRVRAKLKSSTDPKAIEIPRQWYNLVADLPIKPPPFLHPKTHEPVK 375
            S K   AHL+ S+GYR +A   S+ + K++E+PRQWYNLVADLP+KPPP LHPKT+EP+K
Sbjct: 14   SLKRVPAHLRFSNGYRTKAA--SNPNLKSVEVPRQWYNLVADLPVKPPPPLHPKTYEPIK 71

Query: 376  PEDLSPLFSDELILQEASTERFIDIPDEVVDIYKLWRPTPLIRAKRLEKLLDTPARIYYK 555
            PEDLS LF DELI QEASTER+I+IPDEVVDIY LWRPTPLIRAKRLEKLLDTPARIYYK
Sbjct: 72   PEDLSHLFPDELIKQEASTERYINIPDEVVDIYGLWRPTPLIRAKRLEKLLDTPARIYYK 131

Query: 556  YEGGSPAGSHKPNTAVPQVWYNAQQGVKSIVTETGAGQWGSSLAFACSLFGLNCEVWQVR 735
            YEG SPAGSHKPN+AVPQVWYNAQ+GVK++VTETGAGQWG SLAFACS+FG+ CEVWQVR
Sbjct: 132  YEGVSPAGSHKPNSAVPQVWYNAQEGVKNVVTETGAGQWGCSLAFACSIFGIGCEVWQVR 191

Query: 736  ESYDQKPYRKLMMQTWGAKVHPSPSSITDAGRKILQMDPSSPGSLGIAISEAVEMAAKNA 915
             SYDQKPYR++MM+TWGAKVHPSPS ITDAGRK LQ+DPSSPGSLGIAISEAVE+AA NA
Sbjct: 192  ASYDQKPYRRMMMETWGAKVHPSPSDITDAGRKFLQVDPSSPGSLGIAISEAVEVAALNA 251

Query: 916  DTKYCLGSVLNHVLLHQTIIGEECIKQMEAIGETPDLIIGCTGGGSNFGGLAFPFIREKL 1095
            DTKYCLGSVLNHVLLHQT+IGEEC+KQ+EA+GETPDLIIGCTGGGSNF GL+FPF+REKL
Sbjct: 252  DTKYCLGSVLNHVLLHQTVIGEECLKQLEALGETPDLIIGCTGGGSNFAGLSFPFLREKL 311

Query: 1096 AGKINPLIRAVEPTACPSLTKGRYTYDYGDTAGLTPLMKMHTLGHDFIPDPIHSGGLRYH 1275
            AG INP+IRAVEP ACPSLTKG Y YDYGDTAG+TPLMKMHTLGH+FIPDPIH+GGLRYH
Sbjct: 312  AGNINPVIRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHNFIPDPIHAGGLRYH 371

Query: 1276 GMAPLISHIYELGFMEALAIPQIECFRGAIQFARTEGLIAAPEPTHAIAATIREALHCKE 1455
            GMAPLISH+Y LG +EA+++PQ ECF+GAIQFAR+EGLI APEPTHAIAATIREAL C+E
Sbjct: 372  GMAPLISHVYNLGLLEAISLPQTECFQGAIQFARSEGLIPAPEPTHAIAATIREALRCRE 431

Query: 1456 TGEAKVILMAMCGHGHFDLPAYEKYLQGNMVDLSFSDEKMQASLADVPKV 1605
            TGE+KVIL AMCGHGHFDLPAYEKYLQG + DLSF++EK+Q SL  +P+V
Sbjct: 432  TGESKVILTAMCGHGHFDLPAYEKYLQGGISDLSFANEKIQESLTTIPQV 481


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