BLASTX nr result

ID: Cimicifuga21_contig00002348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002348
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518407.1| short-chain dehydrogenase, putative [Ricinus...   342   1e-91
ref|XP_002316593.1| predicted protein [Populus trichocarpa] gi|1...   339   7e-91
ref|XP_002874790.1| short-chain dehydrogenase/reductase family p...   338   1e-90
ref|XP_004145424.1| PREDICTED: dehydrogenase/reductase SDR famil...   338   2e-90
ref|NP_567300.1| dehydrogenase/reductase SDR family member 4 [Ar...   337   3e-90

>ref|XP_002518407.1| short-chain dehydrogenase, putative [Ricinus communis]
           gi|223542252|gb|EEF43794.1| short-chain dehydrogenase,
           putative [Ricinus communis]
          Length = 253

 Score =  342 bits (877), Expect = 1e-91
 Identities = 176/250 (70%), Positives = 201/250 (80%)
 Frame = +2

Query: 188 LMKRFQGKVAIVTASTQGIGFGIAERLGAEGASVVISSRKQKNVDEAVEKLRARGLEVFG 367
           L KRF+GKVA+VTASTQGIGF IA RL  EGAS+V+SSRKQKNVDEAVEKL+A G++V G
Sbjct: 4   LAKRFEGKVALVTASTQGIGFAIARRLALEGASLVVSSRKQKNVDEAVEKLQAEGIQVLG 63

Query: 368 VVCHVSNPQHRKDLIEKTIQKYGKIDVIVSNAAANPSVDNILETQESVLDKLWDINVKAS 547
           VVCHVSN QHRK LI KT+++YGKIDVIVSNAAANPS + IL+TQESVLDKLW+INVKAS
Sbjct: 64  VVCHVSNAQHRKHLIHKTVERYGKIDVIVSNAAANPSTEAILKTQESVLDKLWEINVKAS 123

Query: 548 ILLLKDASPHLQKGSSVVFISSIAAYQPQASMAMYGVXXXXXXXXXXXXXXEMAPDTRVN 727
           ILLL+DA+P+LQKGSSV+ +SSI+ Y P ASMAMYGV              EMAPDTRVN
Sbjct: 124 ILLLQDAAPYLQKGSSVILVSSISGYSPPASMAMYGVTKTALLGLTKALAAEMAPDTRVN 183

Query: 728 TVAPGFVPTHFADFITKDASVRKAIEEKTLLNRLGTTGXXXXXXXXXXXXXXSYITGETL 907
            +APGFVPTHFADF+TK+ +VRK+IEEKT LNRLGTT               SYITGETL
Sbjct: 184 CIAPGFVPTHFADFLTKNEAVRKSIEEKTFLNRLGTTQDMAAAAAFLASDEASYITGETL 243

Query: 908 VVAGGIPSRL 937
           VVAGG+ SRL
Sbjct: 244 VVAGGMTSRL 253


>ref|XP_002316593.1| predicted protein [Populus trichocarpa] gi|118487888|gb|ABK95766.1|
           unknown [Populus trichocarpa]
           gi|222859658|gb|EEE97205.1| predicted protein [Populus
           trichocarpa]
          Length = 256

 Score =  339 bits (870), Expect = 7e-91
 Identities = 173/248 (69%), Positives = 197/248 (79%)
 Frame = +2

Query: 194 KRFQGKVAIVTASTQGIGFGIAERLGAEGASVVISSRKQKNVDEAVEKLRARGLEVFGVV 373
           KRF+GKV IVTASTQGIGF IAER G EGASVVISSRKQKNVDEA EKL+A+G++V GVV
Sbjct: 9   KRFEGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQKNVDEAAEKLKAKGIKVLGVV 68

Query: 374 CHVSNPQHRKDLIEKTIQKYGKIDVIVSNAAANPSVDNILETQESVLDKLWDINVKASIL 553
           CHVSN Q RK+LIE T+QKYGKID++VSNAA NPS D+ILETQESVLDKLW+INVKA+IL
Sbjct: 69  CHVSNAQQRKNLIETTVQKYGKIDIVVSNAAVNPSTDSILETQESVLDKLWEINVKAAIL 128

Query: 554 LLKDASPHLQKGSSVVFISSIAAYQPQASMAMYGVXXXXXXXXXXXXXXEMAPDTRVNTV 733
           LLKDA+PH++KGSSV+ ISSI  Y P +SMAMYGV              EMAP TRVN +
Sbjct: 129 LLKDATPHMKKGSSVILISSIGGYHPHSSMAMYGVTKTALFGLTKVLAAEMAPHTRVNCI 188

Query: 734 APGFVPTHFADFITKDASVRKAIEEKTLLNRLGTTGXXXXXXXXXXXXXXSYITGETLVV 913
           APGFVPTHFADFIT + ++RK IE++TLL RLGTT               SYITGETLVV
Sbjct: 189 APGFVPTHFADFITGNQTIRKTIEDQTLLKRLGTTDDMASAVAFLASDDASYITGETLVV 248

Query: 914 AGGIPSRL 937
           AGG+PSRL
Sbjct: 249 AGGMPSRL 256


>ref|XP_002874790.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297320627|gb|EFH51049.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 254

 Score =  338 bits (868), Expect = 1e-90
 Identities = 169/250 (67%), Positives = 200/250 (80%)
 Frame = +2

Query: 188 LMKRFQGKVAIVTASTQGIGFGIAERLGAEGASVVISSRKQKNVDEAVEKLRARGLEVFG 367
           L +R +GKVAIVTASTQGIGFGI ER G EGASVV+SSRKQ NVDEAV KL+++G++ +G
Sbjct: 5   LPRRLEGKVAIVTASTQGIGFGIIERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYG 64

Query: 368 VVCHVSNPQHRKDLIEKTIQKYGKIDVIVSNAAANPSVDNILETQESVLDKLWDINVKAS 547
           +VCHVSN QHR++L+EKT+QKYGKID++V NAAANPS D IL ++E+VLDKLW+INVK+S
Sbjct: 65  IVCHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSS 124

Query: 548 ILLLKDASPHLQKGSSVVFISSIAAYQPQASMAMYGVXXXXXXXXXXXXXXEMAPDTRVN 727
           ILLL+D +PHL+KGSSV+FI+SIA +QPQ +MAMYGV              EMAPDTRVN
Sbjct: 125 ILLLQDMAPHLEKGSSVIFITSIAGFQPQGAMAMYGVTKTALLGLTKALAAEMAPDTRVN 184

Query: 728 TVAPGFVPTHFADFITKDASVRKAIEEKTLLNRLGTTGXXXXXXXXXXXXXXSYITGETL 907
            VAPGFVPTHFA FIT  + VR+ IEEKTLLNRLGTTG              SYITGETL
Sbjct: 185 AVAPGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYITGETL 244

Query: 908 VVAGGIPSRL 937
           VVAGG+PSRL
Sbjct: 245 VVAGGMPSRL 254


>ref|XP_004145424.1| PREDICTED: dehydrogenase/reductase SDR family member 4-like
           [Cucumis sativus] gi|449531127|ref|XP_004172539.1|
           PREDICTED: dehydrogenase/reductase SDR family member
           4-like [Cucumis sativus]
          Length = 255

 Score =  338 bits (866), Expect = 2e-90
 Identities = 174/248 (70%), Positives = 197/248 (79%)
 Frame = +2

Query: 194 KRFQGKVAIVTASTQGIGFGIAERLGAEGASVVISSRKQKNVDEAVEKLRARGLEVFGVV 373
           KRF+GKVAIVTASTQGIGF IA RL  EGASVVISSR+Q+NVDEAVEKL+A+GLEV G+V
Sbjct: 8   KRFEGKVAIVTASTQGIGFEIARRLAFEGASVVISSRRQRNVDEAVEKLKAQGLEVLGIV 67

Query: 374 CHVSNPQHRKDLIEKTIQKYGKIDVIVSNAAANPSVDNILETQESVLDKLWDINVKASIL 553
           CHVSN Q RK+L+EKTIQKYGKIDV+VSNAA NPSVD+IL+T+ESVLDKLWDINVKAS+L
Sbjct: 68  CHVSNAQQRKNLVEKTIQKYGKIDVVVSNAAVNPSVDSILKTKESVLDKLWDINVKASVL 127

Query: 554 LLKDASPHLQKGSSVVFISSIAAYQPQASMAMYGVXXXXXXXXXXXXXXEMAPDTRVNTV 733
           LL+D +PHLQKGSSVV ISSI  Y P + +AMYGV              EMAPDTRVN V
Sbjct: 128 LLQDVAPHLQKGSSVVLISSIEGYNPSSLLAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187

Query: 734 APGFVPTHFADFITKDASVRKAIEEKTLLNRLGTTGXXXXXXXXXXXXXXSYITGETLVV 913
           APGFVPTHFADF+  + ++RK +E KTLLNRLGTT               SYITGE LVV
Sbjct: 188 APGFVPTHFADFLVTNEAIRKGVESKTLLNRLGTTEDMAAATAFLASDDASYITGEILVV 247

Query: 914 AGGIPSRL 937
           AGG+PSRL
Sbjct: 248 AGGMPSRL 255


>ref|NP_567300.1| dehydrogenase/reductase SDR family member 4 [Arabidopsis thaliana]
           gi|5732060|gb|AAD48959.1|AF147263_1 contains similarity
           to Pfam families PF00106 (short chain dehydrogenase;
           score=151.7, E=1.3e-41, N=1) and PF00678 (Short chain
           dehydrogenase/reductase C-terminus; score=48.9,
           E=1.1e-10, N=1) [Arabidopsis thaliana]
           gi|7267313|emb|CAB81095.1| AT4g05530 [Arabidopsis
           thaliana] gi|14334866|gb|AAK59611.1| unknown protein
           [Arabidopsis thaliana] gi|21281153|gb|AAM44948.1|
           unknown protein [Arabidopsis thaliana]
           gi|21593394|gb|AAM65343.1| putative tropinone reductase
           [Arabidopsis thaliana] gi|332657132|gb|AEE82532.1|
           dehydrogenase/reductase SDR family member 4 [Arabidopsis
           thaliana]
          Length = 254

 Score =  337 bits (864), Expect = 3e-90
 Identities = 168/250 (67%), Positives = 199/250 (79%)
 Frame = +2

Query: 188 LMKRFQGKVAIVTASTQGIGFGIAERLGAEGASVVISSRKQKNVDEAVEKLRARGLEVFG 367
           L +R +GKVAIVTASTQGIGFGI ER G EGASVV+SSRKQ NVDEAV KL+++G++ +G
Sbjct: 5   LPRRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYG 64

Query: 368 VVCHVSNPQHRKDLIEKTIQKYGKIDVIVSNAAANPSVDNILETQESVLDKLWDINVKAS 547
           +VCHVSN QHR++L+EKT+QKYGKID++V NAAANPS D IL ++E+VLDKLW+INVK+S
Sbjct: 65  IVCHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSS 124

Query: 548 ILLLKDASPHLQKGSSVVFISSIAAYQPQASMAMYGVXXXXXXXXXXXXXXEMAPDTRVN 727
           ILLL+D +PHL+KGSSV+FI+SIA + PQ +MAMYGV              EMAPDTRVN
Sbjct: 125 ILLLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAPDTRVN 184

Query: 728 TVAPGFVPTHFADFITKDASVRKAIEEKTLLNRLGTTGXXXXXXXXXXXXXXSYITGETL 907
            VAPGFVPTHFA FIT  + VR+ IEEKTLLNRLGTTG              SYITGETL
Sbjct: 185 AVAPGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYITGETL 244

Query: 908 VVAGGIPSRL 937
           VVAGG+PSRL
Sbjct: 245 VVAGGMPSRL 254


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