BLASTX nr result

ID: Cimicifuga21_contig00002341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002341
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22790.1| unknown [Picea sitchensis] gi|148907769|gb|ABR170...   225   7e-57
emb|CBI36518.3| unnamed protein product [Vitis vinifera]              225   1e-56
ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis ...   225   1e-56
gb|ACN40559.1| unknown [Picea sitchensis] gi|224286397|gb|ACN409...   224   2e-56
gb|ABK22470.1| unknown [Picea sitchensis]                             224   2e-56

>gb|ABK22790.1| unknown [Picea sitchensis] gi|148907769|gb|ABR17010.1| unknown
           [Picea sitchensis] gi|148909746|gb|ABR17964.1| unknown
           [Picea sitchensis] gi|148909851|gb|ABR18012.1| unknown
           [Picea sitchensis]
          Length = 141

 Score =  225 bits (574), Expect = 7e-57
 Identities = 106/120 (88%), Positives = 117/120 (97%)
 Frame = +1

Query: 232 MDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCVVADDCNQPDYVKLVRALCAD 411
           MDI+TALQLVLKKSLAHDGLARGLHEGAK IEKHAAQLCV+A+DCNQPDY KLV+ALCA+
Sbjct: 22  MDILTALQLVLKKSLAHDGLARGLHEGAKAIEKHAAQLCVLAEDCNQPDYTKLVQALCAE 81

Query: 412 HNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEESEGLHIVQEYVKSH 591
           HNV+LISVPSAK LGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEE+EGL+++QEYVK+H
Sbjct: 82  HNVNLISVPSAKKLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEETEGLNVIQEYVKTH 141


>emb|CBI36518.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score =  225 bits (573), Expect = 1e-56
 Identities = 107/120 (89%), Positives = 117/120 (97%)
 Frame = +1

Query: 232 MDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCVVADDCNQPDYVKLVRALCAD 411
           +D+MTALQLVL+KSLAH GL RGLHEGAKVIEKHAAQLCV+A+DCNQPDY+KLV+ALCAD
Sbjct: 58  LDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLCVLAEDCNQPDYIKLVKALCAD 117

Query: 412 HNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEESEGLHIVQEYVKSH 591
           HNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEE+ GLHIVQE+VKS+
Sbjct: 118 HNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEETPGLHIVQEHVKSN 177


>ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis vinifera]
          Length = 140

 Score =  225 bits (573), Expect = 1e-56
 Identities = 107/120 (89%), Positives = 117/120 (97%)
 Frame = +1

Query: 232 MDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCVVADDCNQPDYVKLVRALCAD 411
           +D+MTALQLVL+KSLAH GL RGLHEGAKVIEKHAAQLCV+A+DCNQPDY+KLV+ALCAD
Sbjct: 21  LDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLCVLAEDCNQPDYIKLVKALCAD 80

Query: 412 HNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEESEGLHIVQEYVKSH 591
           HNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEE+ GLHIVQE+VKS+
Sbjct: 81  HNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEETPGLHIVQEHVKSN 140


>gb|ACN40559.1| unknown [Picea sitchensis] gi|224286397|gb|ACN40906.1| unknown
           [Picea sitchensis]
          Length = 141

 Score =  224 bits (571), Expect = 2e-56
 Identities = 105/120 (87%), Positives = 117/120 (97%)
 Frame = +1

Query: 232 MDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCVVADDCNQPDYVKLVRALCAD 411
           MDI+TALQLVLKKSLAHDGLARGLHEGAK IEKHAAQLCV+A+DCNQPDY KLV+ALCA+
Sbjct: 22  MDILTALQLVLKKSLAHDGLARGLHEGAKAIEKHAAQLCVLAEDCNQPDYTKLVQALCAE 81

Query: 412 HNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEESEGLHIVQEYVKSH 591
           HNV+LISVPSAK LGEWAGLCKIDSEGKARKVVGCSC+VVKDYGEE+EGL+++QEYVK+H
Sbjct: 82  HNVNLISVPSAKKLGEWAGLCKIDSEGKARKVVGCSCLVVKDYGEETEGLNVIQEYVKTH 141


>gb|ABK22470.1| unknown [Picea sitchensis]
          Length = 120

 Score =  224 bits (571), Expect = 2e-56
 Identities = 105/120 (87%), Positives = 117/120 (97%)
 Frame = +1

Query: 232 MDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCVVADDCNQPDYVKLVRALCAD 411
           MDI+TALQLVLKKSLAHDGLARGLHEGAK IEKHAAQLCV+A+DCNQPDY KLV+ALCA+
Sbjct: 1   MDILTALQLVLKKSLAHDGLARGLHEGAKAIEKHAAQLCVLAEDCNQPDYTKLVQALCAE 60

Query: 412 HNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEESEGLHIVQEYVKSH 591
           HNV+LISVPSAK LGEWAGLCKIDSEGKARKVVGCSC+VVKDYGEE+EGL+++QEYVK+H
Sbjct: 61  HNVNLISVPSAKKLGEWAGLCKIDSEGKARKVVGCSCLVVKDYGEETEGLNVIQEYVKTH 120


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